RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 DCAF4Q8WV16 495 aa16.3■□□□□ 0.2
VARS2-211ENST00000541562 SIX2Q9NPC8 291 aa16.3■□□□□ 0.2
VARS2-211ENST00000541562 AGPAT3Q9NRZ7 376 aa16.3■□□□□ 0.2
VARS2-211ENST00000541562 USTQ9Y2C2 406 aa16.3■□□□□ 0.2
VARS2-211ENST00000541562 GOLGA6L10A6NI86 522 aa16.3■□□□□ 0.2
VARS2-211ENST00000541562 PIAS1O75925 651 aa16.3■□□□□ 0.2
VARS2-211ENST00000541562 SREBF1P36956 1147 aa16.3■□□□□ 0.2
VARS2-211ENST00000541562 PACS2Q86VP3 889 aa16.3■□□□□ 0.2
VARS2-211ENST00000541562 RPUSD2Q8IZ73 545 aaKnown RBP16.3■□□□□ 0.2
VARS2-211ENST00000541562 BICD1Q96G01 975 aa16.3■□□□□ 0.2
VARS2-211ENST00000541562 INPP4AQ96PE3 977 aaPredicted RBP16.3■□□□□ 0.2
VARS2-211ENST00000541562 TAAR1Q96RJ0 339 aa16.3■□□□□ 0.2
VARS2-211ENST00000541562 FAM169AQ9Y6X4 670 aa16.3■□□□□ 0.2
VARS2-211ENST00000541562 HSD17B3P37058 310 aa16.3■□□□□ 0.2
VARS2-211ENST00000541562 HDLBPQ00341 1268 aaKnown RBP16.3■□□□□ 0.2
VARS2-211ENST00000541562 C15orf52Q6ZUT6 534 aaKnown RBP16.3■□□□□ 0.2
VARS2-211ENST00000541562 SAMD7Q7Z3H4 446 aa16.3■□□□□ 0.2
VARS2-211ENST00000541562 RPGRIP1Q96KN7 1286 aa16.3■□□□□ 0.2
VARS2-211ENST00000541562 KCNH7Q9NS40 1196 aa16.3■□□□□ 0.2
VARS2-211ENST00000541562 AMFRQ9UKV5 643 aa16.3■□□□□ 0.2
VARS2-211ENST00000541562 COG5Q9UP83 839 aa16.3■□□□□ 0.2
VARS2-211ENST00000541562 LAMA3Q16787 3333 aa16.29■□□□□ 0.2
VARS2-211ENST00000541562 TARSL2A2RTX5 802 aaKnown RBP16.29■□□□□ 0.2
VARS2-211ENST00000541562 EYA4O95677 639 aa16.29■□□□□ 0.2
VARS2-211ENST00000541562 FGFR4P22455 802 aa16.29■□□□□ 0.2
VARS2-211ENST00000541562 STRIP1Q5VSL9 837 aa16.29■□□□□ 0.2
VARS2-211ENST00000541562 TMEM130Q8N3G9 435 aa16.29■□□□□ 0.2
VARS2-211ENST00000541562 ALG3Q92685 438 aa16.29■□□□□ 0.2
VARS2-211ENST00000541562 PPP1R16BQ96T49 567 aa16.29■□□□□ 0.2
VARS2-211ENST00000541562 MYO1FO00160 1098 aa16.29■□□□□ 0.2
VARS2-211ENST00000541562 OPA1O60313 960 aa16.29■□□□□ 0.2
VARS2-211ENST00000541562 NR1D1P20393 614 aa16.29■□□□□ 0.2
VARS2-211ENST00000541562 SLC47A2Q86VL8 602 aa16.29■□□□□ 0.2
VARS2-211ENST00000541562 PGRMC1O00264 195 aaKnown RBP16.28■□□□□ 0.2
VARS2-211ENST00000541562 SHBGP04278 402 aa16.28■□□□□ 0.2
VARS2-211ENST00000541562 SMARCA1P28370 1054 aa16.28■□□□□ 0.2
VARS2-211ENST00000541562 ZNF394Q53GI3 561 aa16.28■□□□□ 0.2
VARS2-211ENST00000541562 C1orf54Q8WWF1 131 aa16.28■□□□□ 0.2
VARS2-211ENST00000541562 ATG4AQ8WYN0 398 aa16.28■□□□□ 0.2
VARS2-211ENST00000541562 IGLV3-22A0A075B6J6 115 aa16.28■□□□□ 0.2
VARS2-211ENST00000541562 PHF20L1A8MW92 1017 aa16.28■□□□□ 0.2
VARS2-211ENST00000541562 GNA14O95837 355 aa16.28■□□□□ 0.2
VARS2-211ENST00000541562 IVLP07476 585 aa16.28■□□□□ 0.2
VARS2-211ENST00000541562 MAGOHP61326 146 aaKnown RBP16.28■□□□□ 0.2
VARS2-211ENST00000541562 CDK17Q00537 523 aa16.28■□□□□ 0.2
VARS2-211ENST00000541562 LRRC14Q15048 493 aa16.28■□□□□ 0.2
VARS2-211ENST00000541562 DEFB132Q7Z7B7 95 aa16.28■□□□□ 0.2
VARS2-211ENST00000541562 CDR2LQ86X02 465 aaPredicted RBP16.28■□□□□ 0.2
VARS2-211ENST00000541562 MAGOHBQ96A72 148 aaKnown RBP16.28■□□□□ 0.2
VARS2-211ENST00000541562 ACSF2Q96CM8 615 aaPredicted RBP16.28■□□□□ 0.2
VARS2-211ENST00000541562 ZNF70Q9UC06 446 aaPredicted RBP16.28■□□□□ 0.2
VARS2-211ENST00000541562 MYO3BQ8WXR4 1341 aa16.28■□□□□ 0.2
VARS2-211ENST00000541562 hCG_1984214I3L0E3 225 aa16.28■□□□□ 0.2
VARS2-211ENST00000541562 SPOPO43791 374 aa16.28■□□□□ 0.2
VARS2-211ENST00000541562 PSMC4P43686 418 aa16.28■□□□□ 0.2
VARS2-211ENST00000541562 PRELPP51888 382 aa16.28■□□□□ 0.2
VARS2-211ENST00000541562 SCARA3Q6AZY7 606 aa16.28■□□□□ 0.2
VARS2-211ENST00000541562 C1orf186Q6ZWK4 172 aa16.28■□□□□ 0.2
VARS2-211ENST00000541562 ZNF713Q8N859 430 aaPredicted RBP16.28■□□□□ 0.2
VARS2-211ENST00000541562 CAPN7Q9Y6W3 813 aa16.28■□□□□ 0.2
VARS2-211ENST00000541562 LAMB1P07942 1786 aa16.28■□□□□ 0.2
VARS2-211ENST00000541562 F8VZ95 297 aa16.27■□□□□ 0.2
VARS2-211ENST00000541562 PPFIA4O75335 1185 aa16.27■□□□□ 0.2
VARS2-211ENST00000541562 SPOPLQ6IQ16 392 aa16.27■□□□□ 0.2
VARS2-211ENST00000541562 ZNF720Q7Z2F6 126 aa16.27■□□□□ 0.2
VARS2-211ENST00000541562 PDXKO00764 312 aa16.27■□□□□ 0.2
VARS2-211ENST00000541562 MMEP08473 750 aa16.27■□□□□ 0.2
VARS2-211ENST00000541562 PPFIA1Q13136 1202 aa16.27■□□□□ 0.2
VARS2-211ENST00000541562 PIK3R5Q8WYR1 880 aa16.27■□□□□ 0.2
VARS2-211ENST00000541562 ZKSCAN4Q969J2 545 aaPredicted RBP16.27■□□□□ 0.2
VARS2-211ENST00000541562 HSD17B14Q9BPX1 270 aa16.27■□□□□ 0.2
VARS2-211ENST00000541562 AIPL1Q9NZN9 384 aa16.27■□□□□ 0.2
VARS2-211ENST00000541562 TBK1Q9UHD2 729 aa16.27■□□□□ 0.2
VARS2-211ENST00000541562 SOX5P35711 763 aa16.27■□□□□ 0.19
VARS2-211ENST00000541562 TNIP1Q15025 636 aa16.27■□□□□ 0.19
VARS2-211ENST00000541562 SYCP2LQ5T4T6 812 aa16.27■□□□□ 0.19
VARS2-211ENST00000541562 SEPT14Q6ZU15 432 aa16.27■□□□□ 0.19
VARS2-211ENST00000541562 ZHX2Q9Y6X8 837 aa16.27■□□□□ 0.19
VARS2-211ENST00000541562 PJA2O43164 708 aa16.26■□□□□ 0.19
VARS2-211ENST00000541562 SPP2Q13103 211 aa16.26■□□□□ 0.19
VARS2-211ENST00000541562 AP3B2Q13367 1082 aa16.26■□□□□ 0.19
VARS2-211ENST00000541562 FRMD5Q7Z6J6 570 aa16.26■□□□□ 0.19
VARS2-211ENST00000541562 DAW1Q8N136 415 aa16.26■□□□□ 0.19
VARS2-211ENST00000541562 TEKT3Q9BXF9 490 aa16.26■□□□□ 0.19
VARS2-211ENST00000541562 ANKRD63C9JTQ0 380 aa16.26■□□□□ 0.19
VARS2-211ENST00000541562 DCAF12L1Q5VU92 463 aa16.26■□□□□ 0.19
VARS2-211ENST00000541562 B4GALNT4Q76KP1 1039 aa16.26■□□□□ 0.19
VARS2-211ENST00000541562 RNF10Q8N5U6 811 aaKnown RBP16.26■□□□□ 0.19
VARS2-211ENST00000541562 PLEKHO2Q8TD55 490 aa16.26■□□□□ 0.19
VARS2-211ENST00000541562 CPA5Q8WXQ8 436 aa16.26■□□□□ 0.19
VARS2-211ENST00000541562 DBR1Q9UK59 544 aaKnown RBP16.26■□□□□ 0.19
VARS2-211ENST00000541562 ZMYM2Q9UBW7 1377 aa16.26■□□□□ 0.19
VARS2-211ENST00000541562 CYP3A7-CYP3A51PA0A087WV96 503 aa16.26■□□□□ 0.19
VARS2-211ENST00000541562 UAP1Q16222 522 aaPredicted RBP16.26■□□□□ 0.19
VARS2-211ENST00000541562 DPH6Q7L8W6 267 aa16.26■□□□□ 0.19
VARS2-211ENST00000541562 TATDN2Q93075 761 aa16.26■□□□□ 0.19
VARS2-211ENST00000541562 HAUS1Q96CS2 278 aa16.26■□□□□ 0.19
VARS2-211ENST00000541562 PNMA2Q9UL42 364 aa16.26■□□□□ 0.19
VARS2-211ENST00000541562 COL22A1Q8NFW1 1626 aaPredicted RBP16.25■□□□□ 0.19
VARS2-211ENST00000541562 ACSL3O95573 720 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms