RNA–Protein interactions for RNA: ENST00000541354.5

SPOCK3-226, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 2 BASIC

Gene SPOCK3, Length 2,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-226ENST00000541354 PDXDC1Q6P996 788 aa16.04■□□□□ 0.16
SPOCK3-226ENST00000541354 ZNF771Q7L3S4 317 aaPredicted RBP16.04■□□□□ 0.16
SPOCK3-226ENST00000541354 ZNF467Q7Z7K2 595 aaPredicted RBP16.04■□□□□ 0.16
SPOCK3-226ENST00000541354 DAW1Q8N136 415 aa16.04■□□□□ 0.16
SPOCK3-226ENST00000541354 NOA1Q8NC60 698 aaKnown RBP16.04■□□□□ 0.16
SPOCK3-226ENST00000541354 TRIM58Q8NG06 486 aa16.04■□□□□ 0.16
SPOCK3-226ENST00000541354 PCMTD1Q96MG8 357 aaPredicted RBP16.04■□□□□ 0.16
SPOCK3-226ENST00000541354 ACCSQ96QU6 501 aa16.04■□□□□ 0.16
SPOCK3-226ENST00000541354 UIMC1Q96RL1 719 aa16.04■□□□□ 0.16
SPOCK3-226ENST00000541354 FGFBP2Q9BYJ0 223 aa16.04■□□□□ 0.16
SPOCK3-226ENST00000541354 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.04■□□□□ 0.16
SPOCK3-226ENST00000541354 MAFBQ9Y5Q3 323 aaPredicted RBP16.04■□□□□ 0.16
SPOCK3-226ENST00000541354 RSPH10B2B2RC85 870 aa16.04■□□□□ 0.16
SPOCK3-226ENST00000541354 EPHB6O15197 1021 aa16.04■□□□□ 0.16
SPOCK3-226ENST00000541354 USO1O60763 962 aaKnown RBP16.04■□□□□ 0.16
SPOCK3-226ENST00000541354 RSPH10BP0C881 870 aa16.04■□□□□ 0.16
SPOCK3-226ENST00000541354 CASP5P51878 434 aa16.04■□□□□ 0.16
SPOCK3-226ENST00000541354 ACTR2P61160 394 aa16.04■□□□□ 0.16
SPOCK3-226ENST00000541354 TXLNBQ8N3L3 684 aa16.04■□□□□ 0.16
SPOCK3-226ENST00000541354 EEF2KMTQ96G04 330 aa16.04■□□□□ 0.16
SPOCK3-226ENST00000541354 PDLIM7Q9NR12 457 aa16.04■□□□□ 0.16
SPOCK3-226ENST00000541354 ARMCX3Q9UH62 379 aaPredicted RBP16.04■□□□□ 0.16
SPOCK3-226ENST00000541354 JRKLQ9Y4A0 524 aa16.04■□□□□ 0.16
SPOCK3-226ENST00000541354 PCDHA13Q9Y5I0 950 aa16.04■□□□□ 0.16
SPOCK3-226ENST00000541354 SOWAHBA6NEL2 793 aa16.03■□□□□ 0.16
SPOCK3-226ENST00000541354 DDX39AO00148 427 aaKnown RBP16.03■□□□□ 0.16
SPOCK3-226ENST00000541354 PSMC2P35998 433 aaKnown RBP16.03■□□□□ 0.16
SPOCK3-226ENST00000541354 VSNL1P62760 191 aa16.03■□□□□ 0.16
SPOCK3-226ENST00000541354 KCTD2Q14681 263 aa16.03■□□□□ 0.16
SPOCK3-226ENST00000541354 NCAPG2Q86XI2 1143 aa16.03■□□□□ 0.16
SPOCK3-226ENST00000541354 RUBCNQ92622 972 aa16.03■□□□□ 0.16
SPOCK3-226ENST00000541354 SECISBP2LQ93073 1101 aaKnown RBP16.03■□□□□ 0.16
SPOCK3-226ENST00000541354 ABCB6Q9NP58 842 aa16.03■□□□□ 0.16
SPOCK3-226ENST00000541354 CEP72Q9P209 647 aa16.03■□□□□ 0.16
SPOCK3-226ENST00000541354 ASB14A6NK59 587 aa16.03■□□□□ 0.16
SPOCK3-226ENST00000541354 PMM2O15305 246 aa16.03■□□□□ 0.16
SPOCK3-226ENST00000541354 TGFB1I1O43294 461 aa16.03■□□□□ 0.16
SPOCK3-226ENST00000541354 ERCC3P19447 782 aa16.03■□□□□ 0.16
SPOCK3-226ENST00000541354 ANXA13P27216 316 aa16.03■□□□□ 0.16
SPOCK3-226ENST00000541354 CACNB1Q02641 598 aaPredicted RBP16.03■□□□□ 0.16
SPOCK3-226ENST00000541354 NELFCDQ8IXH7 590 aa16.03■□□□□ 0.16
SPOCK3-226ENST00000541354 FAM167AQ96KS9 214 aa16.03■□□□□ 0.16
SPOCK3-226ENST00000541354 NIFKQ9BYG3 293 aaKnown RBP16.03■□□□□ 0.16
SPOCK3-226ENST00000541354 PSD3Q9NYI0 1048 aa16.03■□□□□ 0.16
SPOCK3-226ENST00000541354 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.03■□□□□ 0.16
SPOCK3-226ENST00000541354 TBC1D7Q9P0N9 293 aa16.03■□□□□ 0.16
SPOCK3-226ENST00000541354 TFRCP02786 760 aaKnown RBP16.02■□□□□ 0.16
SPOCK3-226ENST00000541354 OAS2P29728 719 aaKnown RBP16.02■□□□□ 0.16
SPOCK3-226ENST00000541354 RFC5P40937 340 aa16.02■□□□□ 0.16
SPOCK3-226ENST00000541354 KIF11P52732 1056 aa16.02■□□□□ 0.16
SPOCK3-226ENST00000541354 SMTNP53814 917 aa16.02■□□□□ 0.16
SPOCK3-226ENST00000541354 VTI1AQ96AJ9 217 aa16.02■□□□□ 0.16
SPOCK3-226ENST00000541354 BORCS6Q96GS4 357 aa16.02■□□□□ 0.16
SPOCK3-226ENST00000541354 MMP19Q99542 508 aa16.02■□□□□ 0.16
SPOCK3-226ENST00000541354 VIPAS39Q9H9C1 493 aa16.02■□□□□ 0.16
SPOCK3-226ENST00000541354 STRNO43815 780 aa16.02■□□□□ 0.15
SPOCK3-226ENST00000541354 PRPF6O94906 941 aaKnown RBP16.02■□□□□ 0.15
SPOCK3-226ENST00000541354 GJA5P36382 358 aa16.02■□□□□ 0.15
SPOCK3-226ENST00000541354 ERVK-9P63128 1117 aa16.02■□□□□ 0.15
SPOCK3-226ENST00000541354 FAM160B1Q5W0V3 765 aa16.02■□□□□ 0.15
SPOCK3-226ENST00000541354 HGSNATQ68CP4 663 aa16.02■□□□□ 0.15
SPOCK3-226ENST00000541354 NEK11Q8NG66 645 aa16.02■□□□□ 0.15
SPOCK3-226ENST00000541354 SIP14410 1827 aa16.01■□□□□ 0.15
SPOCK3-226ENST00000541354 ATP8B3O60423 1300 aa16.01■□□□□ 0.15
SPOCK3-226ENST00000541354 GAS2O43903 313 aaKnown RBP16.01■□□□□ 0.15
SPOCK3-226ENST00000541354 AFPP02771 609 aaKnown RBP16.01■□□□□ 0.15
SPOCK3-226ENST00000541354 UGCGQ16739 394 aa16.01■□□□□ 0.15
SPOCK3-226ENST00000541354 RNF10Q8N5U6 811 aaKnown RBP16.01■□□□□ 0.15
SPOCK3-226ENST00000541354 C2orf69Q8N8R5 385 aa16.01■□□□□ 0.15
SPOCK3-226ENST00000541354 MMS19Q96T76 1030 aa16.01■□□□□ 0.15
SPOCK3-226ENST00000541354 GBA2Q9HCG7 927 aaPredicted RBP16.01■□□□□ 0.15
SPOCK3-226ENST00000541354 HDAC6Q9UBN7 1215 aa16.01■□□□□ 0.15
SPOCK3-226ENST00000541354 SYNGAP1Q96PV0 1343 aa16.01■□□□□ 0.15
SPOCK3-226ENST00000541354 TRPM7Q96QT4 1865 aa16.01■□□□□ 0.15
SPOCK3-226ENST00000541354 LRRC53A6NM62 1247 aa16.01■□□□□ 0.15
SPOCK3-226ENST00000541354 KIAA0391O15091 583 aaKnown RBP16.01■□□□□ 0.15
SPOCK3-226ENST00000541354 P4HA2O15460 535 aa16.01■□□□□ 0.15
SPOCK3-226ENST00000541354 TACC1O75410 805 aa16.01■□□□□ 0.15
SPOCK3-226ENST00000541354 NOL4O94818 638 aa16.01■□□□□ 0.15
SPOCK3-226ENST00000541354 EIF4A3P38919 411 aaKnown RBP16.01■□□□□ 0.15
SPOCK3-226ENST00000541354 SLC26A2P50443 739 aa16.01■□□□□ 0.15
SPOCK3-226ENST00000541354 XKR9Q5GH70 373 aa16.01■□□□□ 0.15
SPOCK3-226ENST00000541354 METTL7BQ6UX53 244 aa16.01■□□□□ 0.15
SPOCK3-226ENST00000541354 MS4A4AQ96JQ5 239 aa16.01■□□□□ 0.15
SPOCK3-226ENST00000541354 IFIH1Q9BYX4 1025 aaKnown RBP16.01■□□□□ 0.15
SPOCK3-226ENST00000541354 MMRN2Q9H8L6 949 aa16.01■□□□□ 0.15
SPOCK3-226ENST00000541354 AGPAT3Q9NRZ7 376 aa16.01■□□□□ 0.15
SPOCK3-226ENST00000541354 GABBR1Q9UBS5 961 aa16.01■□□□□ 0.15
SPOCK3-226ENST00000541354 DIS3Q9Y2L1 958 aaKnown RBP16.01■□□□□ 0.15
SPOCK3-226ENST00000541354 ENC1O14682 589 aa16■□□□□ 0.15
SPOCK3-226ENST00000541354 BACH1O14867 736 aa16■□□□□ 0.15
SPOCK3-226ENST00000541354 PLEKP08567 350 aaPredicted RBP16■□□□□ 0.15
SPOCK3-226ENST00000541354 XRCC5P13010 732 aaKnown RBP16■□□□□ 0.15
SPOCK3-226ENST00000541354 CYP27A1Q02318 531 aa16■□□□□ 0.15
SPOCK3-226ENST00000541354 RAD51AP2Q09MP3 1159 aa16■□□□□ 0.15
SPOCK3-226ENST00000541354 GPS2Q13227 327 aa16■□□□□ 0.15
SPOCK3-226ENST00000541354 ANO5Q75V66 913 aa16■□□□□ 0.15
SPOCK3-226ENST00000541354 GPRC5AQ8NFJ5 357 aa16■□□□□ 0.15
SPOCK3-226ENST00000541354 FAM207AQ9NSI2 230 aaPredicted RBP16■□□□□ 0.15
SPOCK3-226ENST00000541354 PKD2L1Q9P0L9 805 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms