RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 HERC4Q5GLZ8 1057 aaPredicted RBP17.05■□□□□ 0.32
DDB1-216ENST00000539739 ODR4Q5SWX8 454 aa17.05■□□□□ 0.32
DDB1-216ENST00000539739 IPO4Q8TEX9 1081 aaKnown RBP17.05■□□□□ 0.32
DDB1-216ENST00000539739 DHX38Q92620 1227 aaKnown RBP17.05■□□□□ 0.32
DDB1-216ENST00000539739 SCLT1Q96NL6 688 aa17.05■□□□□ 0.32
DDB1-216ENST00000539739 TMEM39AQ9NV64 488 aa17.05■□□□□ 0.32
DDB1-216ENST00000539739 SEL1LQ9UBV2 794 aa17.05■□□□□ 0.32
DDB1-216ENST00000539739 FRMD3A2A2Y4 597 aa17.04■□□□□ 0.32
DDB1-216ENST00000539739 RPN1P04843 607 aaKnown RBP17.04■□□□□ 0.32
DDB1-216ENST00000539739 SRGAP2CP0DJJ0 459 aa17.04■□□□□ 0.32
DDB1-216ENST00000539739 PEX3P56589 373 aa17.04■□□□□ 0.32
DDB1-216ENST00000539739 NLRP11P59045 1033 aaKnown RBP17.04■□□□□ 0.32
DDB1-216ENST00000539739 MRPS6P82932 125 aaKnown RBP17.04■□□□□ 0.32
DDB1-216ENST00000539739 TMEM62Q0P6H9 643 aa17.04■□□□□ 0.32
DDB1-216ENST00000539739 TRIM71Q2Q1W2 868 aaKnown RBP17.04■□□□□ 0.32
DDB1-216ENST00000539739 ZNF410Q86VK4 478 aa17.04■□□□□ 0.32
DDB1-216ENST00000539739 ASAP3Q8TDY4 903 aa17.04■□□□□ 0.32
DDB1-216ENST00000539739 NLRP7Q8WX94 980 aa17.04■□□□□ 0.32
DDB1-216ENST00000539739 WNT8BQ93098 351 aa17.04■□□□□ 0.32
DDB1-216ENST00000539739 SMARCE1Q969G3 411 aa17.04■□□□□ 0.32
DDB1-216ENST00000539739 NLRP4Q96MN2 994 aa17.04■□□□□ 0.32
DDB1-216ENST00000539739 RRAGDQ9NQL2 400 aaPredicted RBP17.04■□□□□ 0.32
DDB1-216ENST00000539739 EXOC1Q9NV70 894 aa17.04■□□□□ 0.32
DDB1-216ENST00000539739 DNAH12Q6ZR08 3092 aa17.04■□□□□ 0.32
DDB1-216ENST00000539739 LRRIQ4A6NIV6 560 aa17.03■□□□□ 0.32
DDB1-216ENST00000539739 CCDC169A6NNP5 214 aa17.03■□□□□ 0.32
DDB1-216ENST00000539739 PITPNM1O00562 1244 aa17.03■□□□□ 0.32
DDB1-216ENST00000539739 CKBP12277 381 aa17.03■□□□□ 0.32
DDB1-216ENST00000539739 NAMPTP43490 491 aa17.03■□□□□ 0.32
DDB1-216ENST00000539739 GPC3P51654 580 aa17.03■□□□□ 0.32
DDB1-216ENST00000539739 RBL2Q08999 1139 aa17.03■□□□□ 0.32
DDB1-216ENST00000539739 KIZQ2M2Z5 673 aa17.03■□□□□ 0.32
DDB1-216ENST00000539739 CCDC183Q5T5S1 534 aa17.03■□□□□ 0.32
DDB1-216ENST00000539739 KSR1Q8IVT5 923 aa17.03■□□□□ 0.32
DDB1-216ENST00000539739 RNF149Q8NC42 400 aa17.03■□□□□ 0.32
DDB1-216ENST00000539739 SLC17A8Q8NDX2 589 aa17.03■□□□□ 0.32
DDB1-216ENST00000539739 SPIRE2Q8WWL2 714 aa17.03■□□□□ 0.32
DDB1-216ENST00000539739 PPP1R16BQ96T49 567 aa17.03■□□□□ 0.32
DDB1-216ENST00000539739 HIPK3Q9H422 1215 aa17.03■□□□□ 0.32
DDB1-216ENST00000539739 GINS2Q9Y248 185 aa17.03■□□□□ 0.32
DDB1-216ENST00000539739 TRPV2Q9Y5S1 764 aa17.03■□□□□ 0.32
DDB1-216ENST00000539739 H0YCG3 227 aa17.03■□□□□ 0.32
DDB1-216ENST00000539739 TRAK2O60296 914 aa17.03■□□□□ 0.32
DDB1-216ENST00000539739 CTSHP09668 335 aa17.03■□□□□ 0.32
DDB1-216ENST00000539739 PHKA2P46019 1235 aa17.03■□□□□ 0.32
DDB1-216ENST00000539739 POU5F1BQ06416 359 aa17.03■□□□□ 0.32
DDB1-216ENST00000539739 COASYQ13057 564 aa17.03■□□□□ 0.32
DDB1-216ENST00000539739 CAPSQ13938 189 aa17.03■□□□□ 0.32
DDB1-216ENST00000539739 SFR1Q86XK3 245 aa17.03■□□□□ 0.32
DDB1-216ENST00000539739 FAM178BQ8IXR5 827 aa17.03■□□□□ 0.32
DDB1-216ENST00000539739 DEPTORQ8TB45 409 aa17.03■□□□□ 0.32
DDB1-216ENST00000539739 BSNDQ8WZ55 320 aa17.03■□□□□ 0.32
DDB1-216ENST00000539739 GSDMAQ96QA5 445 aa17.03■□□□□ 0.32
DDB1-216ENST00000539739 CELF4Q9BZC1 486 aaKnown RBP17.03■□□□□ 0.32
DDB1-216ENST00000539739 GCOM2Q9BZD3 368 aaPredicted RBP17.03■□□□□ 0.32
DDB1-216ENST00000539739 C2orf40Q9H1Z8 148 aa17.03■□□□□ 0.32
DDB1-216ENST00000539739 KMT5AQ9NQR1 393 aa17.03■□□□□ 0.32
DDB1-216ENST00000539739 PRDM5Q9NQX1 630 aaPredicted RBP17.03■□□□□ 0.32
DDB1-216ENST00000539739 RMND1Q9NWS8 449 aa17.03■□□□□ 0.32
DDB1-216ENST00000539739 PRKAG2Q9UGJ0 569 aa17.03■□□□□ 0.32
DDB1-216ENST00000539739 PCDHA5Q9Y5H7 936 aa17.03■□□□□ 0.32
DDB1-216ENST00000539739 CDY2AQ9Y6F7 541 aa17.03■□□□□ 0.32
DDB1-216ENST00000539739 KLRC4O43908 158 aa17.02■□□□□ 0.31
DDB1-216ENST00000539739 GPR32O75388 356 aa17.02■□□□□ 0.31
DDB1-216ENST00000539739 SELPP16109 830 aa17.02■□□□□ 0.31
DDB1-216ENST00000539739 NPTX2P47972 431 aa17.02■□□□□ 0.31
DDB1-216ENST00000539739 CRYBB1P53674 252 aaPredicted RBP17.02■□□□□ 0.31
DDB1-216ENST00000539739 PSMD2Q13200 908 aa17.02■□□□□ 0.31
DDB1-216ENST00000539739 KCNB1Q14721 858 aa17.02■□□□□ 0.31
DDB1-216ENST00000539739 KMT5BQ4FZB7 885 aa17.02■□□□□ 0.31
DDB1-216ENST00000539739 ZNF618Q5T7W0 954 aa17.02■□□□□ 0.31
DDB1-216ENST00000539739 CAVIN1Q6NZI2 390 aaKnown RBP17.02■□□□□ 0.31
DDB1-216ENST00000539739 ZBTB8OSQ8IWT0 167 aa17.02■□□□□ 0.31
DDB1-216ENST00000539739 ZNF668Q96K58 619 aaPredicted RBP17.02■□□□□ 0.31
DDB1-216ENST00000539739 NTPCRQ9BSD7 190 aaKnown RBP17.02■□□□□ 0.31
DDB1-216ENST00000539739 NOC4LQ9BVI4 516 aaKnown RBP17.02■□□□□ 0.31
DDB1-216ENST00000539739 INO80BQ9C086 356 aaPredicted RBP17.02■□□□□ 0.31
DDB1-216ENST00000539739 ADAMTS10Q9H324 1103 aa17.02■□□□□ 0.31
DDB1-216ENST00000539739 MRPL44Q9H9J2 332 aaKnown RBP17.02■□□□□ 0.31
DDB1-216ENST00000539739 KIAA1468Q9P260 1216 aa17.02■□□□□ 0.31
DDB1-216ENST00000539739 TBX21Q9UL17 535 aa17.02■□□□□ 0.31
DDB1-216ENST00000539739 A0A087WZ62 844 aa17.01■□□□□ 0.31
DDB1-216ENST00000539739 EVI5O60447 810 aa17.01■□□□□ 0.31
DDB1-216ENST00000539739 MAPTP10636 758 aaKnown RBP17.01■□□□□ 0.31
DDB1-216ENST00000539739 SCP2P22307 547 aa17.01■□□□□ 0.31
DDB1-216ENST00000539739 ABCD1P33897 745 aa17.01■□□□□ 0.31
DDB1-216ENST00000539739 TERF1P54274 439 aa17.01■□□□□ 0.31
DDB1-216ENST00000539739 PTENP60484 403 aa17.01■□□□□ 0.31
DDB1-216ENST00000539739 FAM26DQ5JW98 314 aa17.01■□□□□ 0.31
DDB1-216ENST00000539739 SRGAP1Q7Z6B7 1085 aa17.01■□□□□ 0.31
DDB1-216ENST00000539739 MTERF4Q7Z6M4 381 aaKnown RBP17.01■□□□□ 0.31
DDB1-216ENST00000539739 SPATA20Q8TB22 786 aa17.01■□□□□ 0.31
DDB1-216ENST00000539739 DPF3Q92784 378 aa17.01■□□□□ 0.31
DDB1-216ENST00000539739 ERCC4Q92889 916 aaPredicted RBP17.01■□□□□ 0.31
DDB1-216ENST00000539739 OSMRQ99650 979 aa17.01■□□□□ 0.31
DDB1-216ENST00000539739 FDXACB1Q9BRP7 624 aaPredicted RBP17.01■□□□□ 0.31
DDB1-216ENST00000539739 NFKBIZQ9BYH8 718 aa17.01■□□□□ 0.31
DDB1-216ENST00000539739 GTPBP4Q9BZE4 634 aaKnown RBP17.01■□□□□ 0.31
DDB1-216ENST00000539739 OLFML3Q9NRN5 406 aa17.01■□□□□ 0.31
DDB1-216ENST00000539739 PHLPP2Q6ZVD8 1323 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms