RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 ORC4O43929 436 aa6.92□□□□□ -1.3
LSAMP-207ENST00000539563 SEC31AO94979 1220 aaKnown RBP6.92□□□□□ -1.3
LSAMP-207ENST00000539563 ZKSCAN8Q15776 578 aaPredicted RBP6.92□□□□□ -1.3
LSAMP-207ENST00000539563 HP1BP3Q5SSJ5 553 aaPredicted RBP6.92□□□□□ -1.3
LSAMP-207ENST00000539563 FRMD5Q7Z6J6 570 aa6.92□□□□□ -1.3
LSAMP-207ENST00000539563 ISCA1Q9BUE6 129 aa6.92□□□□□ -1.3
LSAMP-207ENST00000539563 RAVER2Q9HCJ3 691 aaKnown RBP6.92□□□□□ -1.3
LSAMP-207ENST00000539563 ZNF212Q9UDV6 495 aa6.92□□□□□ -1.3
LSAMP-207ENST00000539563 PXDNLA1KZ92 1463 aa6.92□□□□□ -1.3
LSAMP-207ENST00000539563 SLC4A1P02730 911 aa6.92□□□□□ -1.3
LSAMP-207ENST00000539563 SKIP12755 728 aa6.92□□□□□ -1.3
LSAMP-207ENST00000539563 IFNA8P32881 189 aa6.92□□□□□ -1.3
LSAMP-207ENST00000539563 GCKP35557 465 aa6.92□□□□□ -1.3
LSAMP-207ENST00000539563 KIF19Q2TAC6 998 aa6.92□□□□□ -1.3
LSAMP-207ENST00000539563 FASTKD5Q7L8L6 764 aaKnown RBP6.92□□□□□ -1.3
LSAMP-207ENST00000539563 GDAP1Q8TB36 358 aa6.92□□□□□ -1.3
LSAMP-207ENST00000539563 TDRD3Q9H7E2 651 aaKnown RBP6.92□□□□□ -1.3
LSAMP-207ENST00000539563 FAF1Q9UNN5 650 aaPredicted RBP6.92□□□□□ -1.3
LSAMP-207ENST00000539563 PPME1Q9Y570 386 aa6.92□□□□□ -1.3
LSAMP-207ENST00000539563 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.92□□□□□ -1.3
LSAMP-207ENST00000539563 COPEO14579 308 aa6.92□□□□□ -1.3
LSAMP-207ENST00000539563 GNA15P30679 374 aa6.92□□□□□ -1.3
LSAMP-207ENST00000539563 ARHGDIAP52565 204 aa6.92□□□□□ -1.3
LSAMP-207ENST00000539563 CDC42EP1Q00587 391 aa6.92□□□□□ -1.3
LSAMP-207ENST00000539563 BBS9Q3SYG4 887 aa6.92□□□□□ -1.3
LSAMP-207ENST00000539563 ACAD11Q709F0 780 aa6.92□□□□□ -1.3
LSAMP-207ENST00000539563 NOP9Q86U38 636 aaKnown RBP6.92□□□□□ -1.3
LSAMP-207ENST00000539563 SP8Q8IXZ3 490 aa6.92□□□□□ -1.3
LSAMP-207ENST00000539563 FGD4Q96M96 766 aa6.92□□□□□ -1.3
LSAMP-207ENST00000539563 GINM1Q9NU53 330 aa6.92□□□□□ -1.3
LSAMP-207ENST00000539563 A0A087WUV0 522 aaPredicted RBP6.92□□□□□ -1.3
LSAMP-207ENST00000539563 AP3B1O00203 1094 aa6.92□□□□□ -1.3
LSAMP-207ENST00000539563 CTIFO43310 598 aaKnown RBP6.92□□□□□ -1.3
LSAMP-207ENST00000539563 EPM2AIP1Q7L775 607 aaPredicted RBP6.92□□□□□ -1.3
LSAMP-207ENST00000539563 FMR1NBQ8N0W7 255 aaPredicted RBP6.92□□□□□ -1.3
LSAMP-207ENST00000539563 ACAP3Q96P50 834 aa6.92□□□□□ -1.3
LSAMP-207ENST00000539563 WRNIP1Q96S55 665 aa6.92□□□□□ -1.3
LSAMP-207ENST00000539563 SAYSD1Q9NPB0 183 aa6.92□□□□□ -1.3
LSAMP-207ENST00000539563 IRAK4Q9NWZ3 460 aa6.92□□□□□ -1.3
LSAMP-207ENST00000539563 SUCLA2Q9P2R7 463 aaPredicted RBP6.92□□□□□ -1.3
LSAMP-207ENST00000539563 ANO9A1A5B4 782 aa6.92□□□□□ -1.3
LSAMP-207ENST00000539563 FAM187AA6NFU0 413 aa6.92□□□□□ -1.3
LSAMP-207ENST00000539563 FGGP02679 453 aa6.92□□□□□ -1.3
LSAMP-207ENST00000539563 CYP19A1P11511 503 aaPredicted RBP6.92□□□□□ -1.3
LSAMP-207ENST00000539563 FCER1AP12319 257 aa6.92□□□□□ -1.3
LSAMP-207ENST00000539563 RECQLP46063 649 aaPredicted RBP6.92□□□□□ -1.3
LSAMP-207ENST00000539563 OCRLQ01968 901 aa6.92□□□□□ -1.3
LSAMP-207ENST00000539563 TBC1D10CQ8IV04 446 aa6.92□□□□□ -1.3
LSAMP-207ENST00000539563 MAML1Q92585 1016 aa6.92□□□□□ -1.3
LSAMP-207ENST00000539563 TRIM4Q9C037 500 aa6.92□□□□□ -1.3
LSAMP-207ENST00000539563 PARVAQ9NVD7 372 aa6.92□□□□□ -1.3
LSAMP-207ENST00000539563 ASAP2O43150 1006 aa6.92□□□□□ -1.3
LSAMP-207ENST00000539563 SNX2O60749 519 aa6.92□□□□□ -1.3
LSAMP-207ENST00000539563 IGKV5-2P06315 115 aa6.92□□□□□ -1.3
LSAMP-207ENST00000539563 DACT3Q96B18 629 aaPredicted RBP6.92□□□□□ -1.3
LSAMP-207ENST00000539563 EIF2AK1Q9BQI3 630 aaKnown RBP6.92□□□□□ -1.3
LSAMP-207ENST00000539563 FAM213AQ9BRX8 229 aa6.92□□□□□ -1.3
LSAMP-207ENST00000539563 TRIM55Q9BYV6 548 aa6.92□□□□□ -1.3
LSAMP-207ENST00000539563 SCOCQ9UIL1 159 aa6.92□□□□□ -1.3
LSAMP-207ENST00000539563 GDAQ9Y2T3 454 aa6.92□□□□□ -1.3
LSAMP-207ENST00000539563 RRP15Q9Y3B9 282 aaKnown RBP6.92□□□□□ -1.3
LSAMP-207ENST00000539563 CRB1P82279 1406 aa6.92□□□□□ -1.3
LSAMP-207ENST00000539563 PNPLA7Q6ZV29 1317 aa6.92□□□□□ -1.3
LSAMP-207ENST00000539563 DENND3A2RUS2 1198 aa6.91□□□□□ -1.3
LSAMP-207ENST00000539563 WDR91A4D1P6 747 aa6.91□□□□□ -1.3
LSAMP-207ENST00000539563 KRT38O76015 456 aa6.91□□□□□ -1.3
LSAMP-207ENST00000539563 DDX5P17844 614 aaKnown RBP6.91□□□□□ -1.3
LSAMP-207ENST00000539563 PSMC5P62195 406 aa6.91□□□□□ -1.3
LSAMP-207ENST00000539563 FOXO4P98177 505 aa6.91□□□□□ -1.3
LSAMP-207ENST00000539563 KCNB1Q14721 858 aa6.91□□□□□ -1.3
LSAMP-207ENST00000539563 DUOXA2Q1HG44 320 aa6.91□□□□□ -1.3
LSAMP-207ENST00000539563 TWF2Q6IBS0 349 aaKnown RBP6.91□□□□□ -1.3
LSAMP-207ENST00000539563 C1orf228Q6PIY5 440 aa6.91□□□□□ -1.3
LSAMP-207ENST00000539563 BRINP3Q76B58 766 aa6.91□□□□□ -1.3
LSAMP-207ENST00000539563 SFR1Q86XK3 245 aa6.91□□□□□ -1.3
LSAMP-207ENST00000539563 DDX50Q9BQ39 737 aaKnown RBP6.91□□□□□ -1.3
LSAMP-207ENST00000539563 KIFC3Q9BVG8 833 aa6.91□□□□□ -1.3
LSAMP-207ENST00000539563 PITPNM3Q9BZ71 974 aa6.91□□□□□ -1.3
LSAMP-207ENST00000539563 MRPL46Q9H2W6 279 aaKnown RBP6.91□□□□□ -1.3
LSAMP-207ENST00000539563 DCP1AQ9NPI6 582 aaPredicted RBP6.91□□□□□ -1.3
LSAMP-207ENST00000539563 FIS1Q9Y3D6 152 aa6.91□□□□□ -1.3
LSAMP-207ENST00000539563 ZHX2Q9Y6X8 837 aa6.91□□□□□ -1.3
LSAMP-207ENST00000539563 KIAA0391O15091 583 aaKnown RBP6.91□□□□□ -1.3
LSAMP-207ENST00000539563 TMCC1O94876 653 aa6.91□□□□□ -1.3
LSAMP-207ENST00000539563 HSPA4LO95757 839 aa6.91□□□□□ -1.3
LSAMP-207ENST00000539563 PYGBP11216 843 aa6.91□□□□□ -1.3
LSAMP-207ENST00000539563 YWHAHQ04917 246 aaPredicted RBP6.91□□□□□ -1.3
LSAMP-207ENST00000539563 GUF1Q8N442 669 aaKnown RBP6.91□□□□□ -1.3
LSAMP-207ENST00000539563 TTC8Q8TAM2 541 aa6.91□□□□□ -1.3
LSAMP-207ENST00000539563 F5H6K3 240 aa6.91□□□□□ -1.3
LSAMP-207ENST00000539563 PSMD3O43242 534 aa6.91□□□□□ -1.3
LSAMP-207ENST00000539563 COPS2P61201 443 aa6.91□□□□□ -1.3
LSAMP-207ENST00000539563 ATP2C1P98194 919 aaPredicted RBP6.91□□□□□ -1.3
LSAMP-207ENST00000539563 KLRC3Q07444 240 aa6.91□□□□□ -1.3
LSAMP-207ENST00000539563 NFX1Q12986 1120 aaKnown RBP6.91□□□□□ -1.3
LSAMP-207ENST00000539563 TSGA10IPQ3SY00 556 aa6.91□□□□□ -1.3
LSAMP-207ENST00000539563 TMCO4Q5TGY1 634 aa6.91□□□□□ -1.3
LSAMP-207ENST00000539563 STAP1Q9ULZ2 295 aa6.91□□□□□ -1.3
LSAMP-207ENST00000539563 NFU1Q9UMS0 254 aa6.91□□□□□ -1.3
LSAMP-207ENST00000539563 MYO3AQ8NEV4 1616 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms