RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 PSD3Q9NYI0 1048 aa18.69■□□□□ 0.58
PCDHB17P-201ENST00000539533 MYH9P35579 1960 aaKnown RBP18.69■□□□□ 0.58
PCDHB17P-201ENST00000539533 IGKV6D-21A0A0A0MT36 114 aa18.69■□□□□ 0.58
PCDHB17P-201ENST00000539533 K7ENM7 598 aa18.69■□□□□ 0.58
PCDHB17P-201ENST00000539533 GNA14O95837 355 aa18.69■□□□□ 0.58
PCDHB17P-201ENST00000539533 TNNT3P45378 269 aaPredicted RBP18.69■□□□□ 0.58
PCDHB17P-201ENST00000539533 PEX3P56589 373 aa18.69■□□□□ 0.58
PCDHB17P-201ENST00000539533 ZNF792Q3KQV3 632 aa18.69■□□□□ 0.58
PCDHB17P-201ENST00000539533 XKR3Q5GH77 459 aa18.69■□□□□ 0.58
PCDHB17P-201ENST00000539533 METTL7BQ6UX53 244 aa18.69■□□□□ 0.58
PCDHB17P-201ENST00000539533 HDXQ7Z353 690 aa18.69■□□□□ 0.58
PCDHB17P-201ENST00000539533 CCDC155Q8N6L0 562 aa18.69■□□□□ 0.58
PCDHB17P-201ENST00000539533 DRC1Q96MC2 740 aa18.69■□□□□ 0.58
PCDHB17P-201ENST00000539533 CYP26B1Q9NR63 512 aa18.69■□□□□ 0.58
PCDHB17P-201ENST00000539533 TRPM7Q96QT4 1865 aa18.69■□□□□ 0.58
PCDHB17P-201ENST00000539533 TTC26A0AVF1 554 aa18.68■□□□□ 0.58
PCDHB17P-201ENST00000539533 ERLIN1O75477 346 aa18.68■□□□□ 0.58
PCDHB17P-201ENST00000539533 CASP4P49662 377 aa18.68■□□□□ 0.58
PCDHB17P-201ENST00000539533 MARSP56192 900 aaKnown RBP18.68■□□□□ 0.58
PCDHB17P-201ENST00000539533 FKBP15Q5T1M5 1219 aa18.68■□□□□ 0.58
PCDHB17P-201ENST00000539533 STXBP4Q6ZWJ1 553 aa18.68■□□□□ 0.58
PCDHB17P-201ENST00000539533 ARMCX2Q7L311 632 aa18.68■□□□□ 0.58
PCDHB17P-201ENST00000539533 TMTC1Q8IUR5 882 aa18.68■□□□□ 0.58
PCDHB17P-201ENST00000539533 TRIM59Q8IWR1 403 aa18.68■□□□□ 0.58
PCDHB17P-201ENST00000539533 ERGIC2Q96RQ1 377 aa18.68■□□□□ 0.58
PCDHB17P-201ENST00000539533 TIPINQ9BVW5 301 aa18.68■□□□□ 0.58
PCDHB17P-201ENST00000539533 PDE11AQ9HCR9 933 aa18.68■□□□□ 0.58
PCDHB17P-201ENST00000539533 ASB14A6NK59 587 aa18.68■□□□□ 0.58
PCDHB17P-201ENST00000539533 IGF2BP3O00425 579 aaKnown RBP eCLIP18.68■□□□□ 0.58
PCDHB17P-201ENST00000539533 AKAP3O75969 853 aa18.68■□□□□ 0.58
PCDHB17P-201ENST00000539533 ECM2O94769 699 aaPredicted RBP18.68■□□□□ 0.58
PCDHB17P-201ENST00000539533 HSDL1Q3SXM5 330 aa18.68■□□□□ 0.58
PCDHB17P-201ENST00000539533 MTERF2Q49AM1 385 aa18.68■□□□□ 0.58
PCDHB17P-201ENST00000539533 CCDC62Q6P9F0 684 aa18.68■□□□□ 0.58
PCDHB17P-201ENST00000539533 GPR142Q7Z601 462 aa18.68■□□□□ 0.58
PCDHB17P-201ENST00000539533 SAPCD2Q86UD0 394 aa18.68■□□□□ 0.58
PCDHB17P-201ENST00000539533 COPS5Q92905 334 aa18.68■□□□□ 0.58
PCDHB17P-201ENST00000539533 PCMTD1Q96MG8 357 aaPredicted RBP18.68■□□□□ 0.58
PCDHB17P-201ENST00000539533 NAPGQ99747 312 aaPredicted RBP18.68■□□□□ 0.58
PCDHB17P-201ENST00000539533 IVNS1ABPQ9Y6Y0 642 aa18.68■□□□□ 0.58
PCDHB17P-201ENST00000539533 PLXNB2O15031 1838 aa18.67■□□□□ 0.58
PCDHB17P-201ENST00000539533 KRT9P35527 623 aa18.67■□□□□ 0.58
PCDHB17P-201ENST00000539533 TCF7P36402 384 aaPredicted RBP18.67■□□□□ 0.58
PCDHB17P-201ENST00000539533 TRIM14Q14142 442 aa18.67■□□□□ 0.58
PCDHB17P-201ENST00000539533 PDLIM7Q9NR12 457 aa18.67■□□□□ 0.58
PCDHB17P-201ENST00000539533 ABHD10Q9NUJ1 306 aa18.67■□□□□ 0.58
PCDHB17P-201ENST00000539533 RSPH14Q9UHP6 348 aa18.67■□□□□ 0.58
PCDHB17P-201ENST00000539533 SLC16A4O15374 487 aa18.67■□□□□ 0.58
PCDHB17P-201ENST00000539533 STRNO43815 780 aa18.67■□□□□ 0.58
PCDHB17P-201ENST00000539533 ABL1P00519 1130 aa18.67■□□□□ 0.58
PCDHB17P-201ENST00000539533 TFRCP02786 760 aaKnown RBP18.67■□□□□ 0.58
PCDHB17P-201ENST00000539533 OATP04181 439 aa18.67■□□□□ 0.58
PCDHB17P-201ENST00000539533 LMAN1P49257 510 aa18.67■□□□□ 0.58
PCDHB17P-201ENST00000539533 FAM110CQ1W6H9 321 aa18.67■□□□□ 0.58
PCDHB17P-201ENST00000539533 CELF3Q5SZQ8 465 aaKnown RBP18.67■□□□□ 0.58
PCDHB17P-201ENST00000539533 KCNV1Q6PIU1 500 aa18.67■□□□□ 0.58
PCDHB17P-201ENST00000539533 C10orf67Q8IYJ2 551 aa18.67■□□□□ 0.58
PCDHB17P-201ENST00000539533 SEPT1Q8WYJ6 367 aa18.67■□□□□ 0.58
PCDHB17P-201ENST00000539533 GBP3Q9H0R5 595 aa18.67■□□□□ 0.58
PCDHB17P-201ENST00000539533 ABCB6Q9NP58 842 aa18.67■□□□□ 0.58
PCDHB17P-201ENST00000539533 XPNPEP1Q9NQW7 623 aa18.67■□□□□ 0.58
PCDHB17P-201ENST00000539533 CPA4Q9UI42 421 aa18.67■□□□□ 0.58
PCDHB17P-201ENST00000539533 L1RE1Q9UN81 338 aa18.67■□□□□ 0.58
PCDHB17P-201ENST00000539533 UBE4BO95155 1302 aa18.66■□□□□ 0.58
PCDHB17P-201ENST00000539533 ARID2Q68CP9 1835 aa18.66■□□□□ 0.58
PCDHB17P-201ENST00000539533 DGAT1O75907 488 aa18.66■□□□□ 0.58
PCDHB17P-201ENST00000539533 TXNP10599 105 aaKnown RBP18.66■□□□□ 0.58
PCDHB17P-201ENST00000539533 MAPTP10636 758 aaKnown RBP18.66■□□□□ 0.58
PCDHB17P-201ENST00000539533 RPL13P26373 211 aaKnown RBP18.66■□□□□ 0.58
PCDHB17P-201ENST00000539533 ARHGAP25P42331 645 aa18.66■□□□□ 0.58
PCDHB17P-201ENST00000539533 WHAMMP3Q1A5X7 153 aa18.66■□□□□ 0.58
PCDHB17P-201ENST00000539533 HAUS6Q7Z4H7 955 aa18.66■□□□□ 0.58
PCDHB17P-201ENST00000539533 SYCP3Q8IZU3 236 aa18.66■□□□□ 0.58
PCDHB17P-201ENST00000539533 MSL3Q8N5Y2 521 aaKnown RBP18.66■□□□□ 0.58
PCDHB17P-201ENST00000539533 BSNDQ8WZ55 320 aa18.66■□□□□ 0.58
PCDHB17P-201ENST00000539533 TTYH3Q9C0H2 523 aa18.66■□□□□ 0.58
PCDHB17P-201ENST00000539533 CWC15Q9P013 229 aaKnown RBP18.66■□□□□ 0.58
PCDHB17P-201ENST00000539533 SIK3Q9Y2K2 1263 aa18.66■□□□□ 0.58
PCDHB17P-201ENST00000539533 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.66■□□□□ 0.58
PCDHB17P-201ENST00000539533 MYO1CO00159 1063 aa18.66■□□□□ 0.58
PCDHB17P-201ENST00000539533 TRIM21P19474 475 aaKnown RBP18.66■□□□□ 0.58
PCDHB17P-201ENST00000539533 STAT5BP51692 787 aa18.66■□□□□ 0.58
PCDHB17P-201ENST00000539533 RGMBQ6NW40 437 aa18.66■□□□□ 0.58
PCDHB17P-201ENST00000539533 CYP26C1Q6V0L0 522 aa18.66■□□□□ 0.58
PCDHB17P-201ENST00000539533 ABRAQ8N0Z2 381 aa18.66■□□□□ 0.58
PCDHB17P-201ENST00000539533 KIFC3Q9BVG8 833 aa18.66■□□□□ 0.58
PCDHB17P-201ENST00000539533 AGPAT3Q9NRZ7 376 aa18.66■□□□□ 0.58
PCDHB17P-201ENST00000539533 AGPAT5Q9NUQ2 364 aa18.66■□□□□ 0.58
PCDHB17P-201ENST00000539533 MYO1AQ9UBC5 1043 aa18.66■□□□□ 0.58
PCDHB17P-201ENST00000539533 LCMT1Q9UIC8 334 aa18.66■□□□□ 0.58
PCDHB17P-201ENST00000539533 PLXNA1Q9UIW2 1896 aa18.65■□□□□ 0.58
PCDHB17P-201ENST00000539533 LOC102724159A0A0B4J2E5 919 aa18.65■□□□□ 0.58
PCDHB17P-201ENST00000539533 CTAGE15A4D2H0 777 aa18.65■□□□□ 0.58
PCDHB17P-201ENST00000539533 CCDC169A6NNP5 214 aa18.65■□□□□ 0.58
PCDHB17P-201ENST00000539533 TISP43B9A030 160 aa18.65■□□□□ 0.58
PCDHB17P-201ENST00000539533 TRIM66O15016 1216 aa18.65■□□□□ 0.58
PCDHB17P-201ENST00000539533 RHOXF2BP0C7M4 288 aa18.65■□□□□ 0.58
PCDHB17P-201ENST00000539533 CTAGE8P0CG41 777 aa18.65■□□□□ 0.58
PCDHB17P-201ENST00000539533 NPTX2P47972 431 aa18.65■□□□□ 0.58
PCDHB17P-201ENST00000539533 PWP2Q15269 919 aaKnown RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms