RNA–Protein interactions for RNA: ENST00000538933.1

CLSTN3-208, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-208ENST00000538933 PBX3P40426 434 aa14.11□□□□□ -0.15
CLSTN3-208ENST00000538933 KRT76Q01546 638 aa14.11□□□□□ -0.15
CLSTN3-208ENST00000538933 NFX1Q12986 1120 aaKnown RBP14.11□□□□□ -0.15
CLSTN3-208ENST00000538933 TRAF1Q13077 416 aa14.11□□□□□ -0.15
CLSTN3-208ENST00000538933 TDGQ13569 410 aa14.11□□□□□ -0.15
CLSTN3-208ENST00000538933 RARS2Q5T160 578 aaKnown RBP14.11□□□□□ -0.15
CLSTN3-208ENST00000538933 LARP1BQ659C4 914 aaKnown RBP14.11□□□□□ -0.15
CLSTN3-208ENST00000538933 KCNT2Q6UVM3 1135 aa14.11□□□□□ -0.15
CLSTN3-208ENST00000538933 TMC7Q7Z402 723 aa14.11□□□□□ -0.15
CLSTN3-208ENST00000538933 HEATR3Q7Z4Q2 680 aa14.11□□□□□ -0.15
CLSTN3-208ENST00000538933 NME8Q8N427 588 aa14.11□□□□□ -0.15
CLSTN3-208ENST00000538933 CCDC12Q8WUD4 166 aaPredicted RBP14.11□□□□□ -0.15
CLSTN3-208ENST00000538933 TMEM40Q8WWA1 233 aa14.11□□□□□ -0.15
CLSTN3-208ENST00000538933 GLG1Q92896 1179 aa14.11□□□□□ -0.15
CLSTN3-208ENST00000538933 C8orf76Q96K31 380 aa14.11□□□□□ -0.15
CLSTN3-208ENST00000538933 CASD1Q96PB1 797 aa14.11□□□□□ -0.15
CLSTN3-208ENST00000538933 CYP26B1Q9NR63 512 aa14.11□□□□□ -0.15
CLSTN3-208ENST00000538933 C1orf112Q9NSG2 853 aa14.11□□□□□ -0.15
CLSTN3-208ENST00000538933 FRYQ5TBA9 3013 aa14.11□□□□□ -0.15
CLSTN3-208ENST00000538933 SMIM35A0A1B0GVV1 85 aa14.1□□□□□ -0.15
CLSTN3-208ENST00000538933 M0QZ92 97 aa14.1□□□□□ -0.15
CLSTN3-208ENST00000538933 ITGB5P18084 799 aa14.1□□□□□ -0.15
CLSTN3-208ENST00000538933 NAPAP54920 295 aa14.1□□□□□ -0.15
CLSTN3-208ENST00000538933 PFKFB3Q16875 520 aaPredicted RBP14.1□□□□□ -0.15
CLSTN3-208ENST00000538933 RSPO4Q2I0M5 234 aaPredicted RBP14.1□□□□□ -0.15
CLSTN3-208ENST00000538933 ATAT1Q5SQI0 421 aa14.1□□□□□ -0.15
CLSTN3-208ENST00000538933 SIX5Q8N196 739 aa14.1□□□□□ -0.15
CLSTN3-208ENST00000538933 CCDC148Q8NFR7 591 aa14.1□□□□□ -0.15
CLSTN3-208ENST00000538933 RUBCNQ92622 972 aa14.1□□□□□ -0.15
CLSTN3-208ENST00000538933 ELAC1Q9H777 363 aaKnown RBP14.1□□□□□ -0.15
CLSTN3-208ENST00000538933 TMEM161AQ9NX61 479 aa14.1□□□□□ -0.15
CLSTN3-208ENST00000538933 DUSP12Q9UNI6 340 aa14.1□□□□□ -0.15
CLSTN3-208ENST00000538933 ST3GAL5Q9UNP4 418 aa14.1□□□□□ -0.15
CLSTN3-208ENST00000538933 VPS37CA5D8V6 355 aaPredicted RBP14.09□□□□□ -0.15
CLSTN3-208ENST00000538933 KRBA1A5PL33 1030 aa14.09□□□□□ -0.15
CLSTN3-208ENST00000538933 hCG_1984214I3L0E3 225 aa14.09□□□□□ -0.15
CLSTN3-208ENST00000538933 MEIS2O14770 477 aa14.09□□□□□ -0.15
CLSTN3-208ENST00000538933 PDIA4P13667 645 aaKnown RBP14.09□□□□□ -0.15
CLSTN3-208ENST00000538933 FUT2Q10981 343 aa14.09□□□□□ -0.15
CLSTN3-208ENST00000538933 GNL2Q13823 731 aaKnown RBP14.09□□□□□ -0.15
CLSTN3-208ENST00000538933 DSC3Q14574 896 aa14.09□□□□□ -0.15
CLSTN3-208ENST00000538933 SMC1AQ14683 1233 aaKnown RBP14.09□□□□□ -0.15
CLSTN3-208ENST00000538933 PLCB4Q15147 1175 aa14.09□□□□□ -0.15
CLSTN3-208ENST00000538933 SAFBQ15424 915 aaKnown RBP eCLIP14.09□□□□□ -0.15
CLSTN3-208ENST00000538933 USP17L6PQ6QN14 398 aa14.09□□□□□ -0.15
CLSTN3-208ENST00000538933 NLRX1Q86UT6 975 aa14.09□□□□□ -0.15
CLSTN3-208ENST00000538933 ZNF713Q8N859 430 aaPredicted RBP14.09□□□□□ -0.15
CLSTN3-208ENST00000538933 SUMF1Q8NBK3 374 aa14.09□□□□□ -0.15
CLSTN3-208ENST00000538933 SLC22A17Q8WUG5 538 aa14.09□□□□□ -0.15
CLSTN3-208ENST00000538933 GPRASP2Q96D09 838 aa14.09□□□□□ -0.15
CLSTN3-208ENST00000538933 TMEM117Q9H0C3 514 aa14.09□□□□□ -0.15
CLSTN3-208ENST00000538933 KCNK12Q9HB15 430 aa14.09□□□□□ -0.15
CLSTN3-208ENST00000538933 ATP6V0A4Q9HBG4 840 aa14.09□□□□□ -0.15
CLSTN3-208ENST00000538933 BRMS1Q9HCU9 246 aa14.09□□□□□ -0.15
CLSTN3-208ENST00000538933 RNF216Q9NWF9 866 aaPredicted RBP14.09□□□□□ -0.15
CLSTN3-208ENST00000538933 SPG21Q9NZD8 308 aa14.09□□□□□ -0.15
CLSTN3-208ENST00000538933 DBR1Q9UK59 544 aaKnown RBP14.09□□□□□ -0.15
CLSTN3-208ENST00000538933 ANKRD11Q6UB99 2663 aaPredicted RBP14.09□□□□□ -0.15
CLSTN3-208ENST00000538933 DENND3A2RUS2 1198 aa14.08□□□□□ -0.16
CLSTN3-208ENST00000538933 PIK3CDO00329 1044 aa14.08□□□□□ -0.16
CLSTN3-208ENST00000538933 RPS6KA5O75582 802 aa14.08□□□□□ -0.16
CLSTN3-208ENST00000538933 FDPSP14324 419 aaKnown RBP14.08□□□□□ -0.16
CLSTN3-208ENST00000538933 EPCAMP16422 314 aa14.08□□□□□ -0.16
CLSTN3-208ENST00000538933 NLRP5P59047 1200 aa14.08□□□□□ -0.16
CLSTN3-208ENST00000538933 GUCY1B3Q02153 619 aa14.08□□□□□ -0.16
CLSTN3-208ENST00000538933 KRT17Q04695 432 aa14.08□□□□□ -0.16
CLSTN3-208ENST00000538933 MTHFD1LQ6UB35 978 aa14.08□□□□□ -0.16
CLSTN3-208ENST00000538933 KIAA0319LQ8IZA0 1049 aa14.08□□□□□ -0.16
CLSTN3-208ENST00000538933 SLC39A11Q8N1S5 342 aa14.08□□□□□ -0.16
CLSTN3-208ENST00000538933 ZNF558Q96NG5 402 aa14.08□□□□□ -0.16
CLSTN3-208ENST00000538933 AIFM3Q96NN9 605 aa14.08□□□□□ -0.16
CLSTN3-208ENST00000538933 DLGAP2Q9P1A6 1054 aa14.08□□□□□ -0.16
CLSTN3-208ENST00000538933 VPS54Q9P1Q0 977 aa14.08□□□□□ -0.16
CLSTN3-208ENST00000538933 DOCK8Q8NF50 2099 aa14.08□□□□□ -0.16
CLSTN3-208ENST00000538933 STX6O43752 255 aa14.07□□□□□ -0.16
CLSTN3-208ENST00000538933 NARSO43776 548 aaKnown RBP14.07□□□□□ -0.16
CLSTN3-208ENST00000538933 SP9P0CG40 484 aa14.07□□□□□ -0.16
CLSTN3-208ENST00000538933 PPM1AP35813 382 aa14.07□□□□□ -0.16
CLSTN3-208ENST00000538933 WWC2Q6AWC2 1192 aa14.07□□□□□ -0.16
CLSTN3-208ENST00000538933 MCTP1Q6DN14 999 aa14.07□□□□□ -0.16
CLSTN3-208ENST00000538933 RIN2Q8WYP3 895 aaPredicted RBP14.07□□□□□ -0.16
CLSTN3-208ENST00000538933 SH3GLB2Q9NR46 395 aa14.07□□□□□ -0.16
CLSTN3-208ENST00000538933 DZANK1Q9NVP4 752 aa14.07□□□□□ -0.16
CLSTN3-208ENST00000538933 WNT16Q9UBV4 365 aa14.07□□□□□ -0.16
CLSTN3-208ENST00000538933 UBIAD1Q9Y5Z9 338 aa14.07□□□□□ -0.16
CLSTN3-208ENST00000538933 CXCL14O95715 111 aa14.06□□□□□ -0.16
CLSTN3-208ENST00000538933 SYT1P21579 422 aa14.06□□□□□ -0.16
CLSTN3-208ENST00000538933 KLRC1P26715 233 aa14.06□□□□□ -0.16
CLSTN3-208ENST00000538933 ATXN1P54253 815 aaKnown RBP14.06□□□□□ -0.16
CLSTN3-208ENST00000538933 NUCB2P80303 420 aa14.06□□□□□ -0.16
CLSTN3-208ENST00000538933 PPP1R18Q6NYC8 613 aa14.06□□□□□ -0.16
CLSTN3-208ENST00000538933 TMC5Q6UXY8 1006 aa14.06□□□□□ -0.16
CLSTN3-208ENST00000538933 PLPPR4Q7Z2D5 763 aa14.06□□□□□ -0.16
CLSTN3-208ENST00000538933 GPR149Q86SP6 731 aa14.06□□□□□ -0.16
CLSTN3-208ENST00000538933 FAM228AQ86W67 206 aa14.06□□□□□ -0.16
CLSTN3-208ENST00000538933 CDHR1Q96JP9 859 aa14.06□□□□□ -0.16
CLSTN3-208ENST00000538933 C6orf50Q9HD87 102 aa14.06□□□□□ -0.16
CLSTN3-208ENST00000538933 BARHL2Q9NY43 387 aa14.06□□□□□ -0.16
CLSTN3-208ENST00000538933 FBXL21Q9UKT6 434 aa14.06□□□□□ -0.16
CLSTN3-208ENST00000538933 CIZ1Q9ULV3 898 aaPredicted RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms