RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 IRF6O14896 467 aa15.84■□□□□ 0.13
CDCA3-207ENST00000538862 ZNF76P36508 570 aa15.84■□□□□ 0.13
CDCA3-207ENST00000538862 CARSP49589 748 aaKnown RBP15.84■□□□□ 0.13
CDCA3-207ENST00000538862 GUCY2DQ02846 1103 aa15.84■□□□□ 0.13
CDCA3-207ENST00000538862 IKQ13123 557 aaPredicted RBP15.84■□□□□ 0.13
CDCA3-207ENST00000538862 IFNL1Q8IU54 200 aa15.84■□□□□ 0.13
CDCA3-207ENST00000538862 TNS4Q8IZW8 715 aa15.84■□□□□ 0.13
CDCA3-207ENST00000538862 IQCKQ8N0W5 287 aa15.84■□□□□ 0.13
CDCA3-207ENST00000538862 LMBR1Q8WVP7 490 aa15.84■□□□□ 0.13
CDCA3-207ENST00000538862 SLC35C1Q96A29 364 aa15.84■□□□□ 0.13
CDCA3-207ENST00000538862 MS4A4AQ96JQ5 239 aa15.84■□□□□ 0.13
CDCA3-207ENST00000538862 KRT12Q99456 494 aa15.84■□□□□ 0.13
CDCA3-207ENST00000538862 PTPN18Q99952 460 aa15.84■□□□□ 0.13
CDCA3-207ENST00000538862 RUSC1Q9BVN2 902 aa15.84■□□□□ 0.13
CDCA3-207ENST00000538862 CAPS2Q9BXY5 557 aa15.84■□□□□ 0.13
CDCA3-207ENST00000538862 SIX2Q9NPC8 291 aa15.84■□□□□ 0.13
CDCA3-207ENST00000538862 RSPH14Q9UHP6 348 aa15.84■□□□□ 0.13
CDCA3-207ENST00000538862 NFU1Q9UMS0 254 aa15.84■□□□□ 0.13
CDCA3-207ENST00000538862 RSPH10B2B2RC85 870 aa15.84■□□□□ 0.13
CDCA3-207ENST00000538862 TULP1O00294 542 aaPredicted RBP15.84■□□□□ 0.13
CDCA3-207ENST00000538862 GFPT2O94808 682 aa15.84■□□□□ 0.13
CDCA3-207ENST00000538862 KIF4AO95239 1232 aa15.84■□□□□ 0.13
CDCA3-207ENST00000538862 GCNT3O95395 438 aa15.84■□□□□ 0.13
CDCA3-207ENST00000538862 RSPH10BP0C881 870 aa15.84■□□□□ 0.13
CDCA3-207ENST00000538862 IRAK1P51617 712 aa15.84■□□□□ 0.13
CDCA3-207ENST00000538862 SNAP25P60880 206 aa15.84■□□□□ 0.13
CDCA3-207ENST00000538862 SKOR1P84550 965 aa15.84■□□□□ 0.13
CDCA3-207ENST00000538862 DCAF17Q5H9S7 520 aaPredicted RBP15.84■□□□□ 0.13
CDCA3-207ENST00000538862 CFAP58Q5T655 872 aa15.84■□□□□ 0.13
CDCA3-207ENST00000538862 RINT1Q6NUQ1 792 aa15.84■□□□□ 0.13
CDCA3-207ENST00000538862 ERO1BQ86YB8 467 aa15.84■□□□□ 0.13
CDCA3-207ENST00000538862 LRRC57Q8N9N7 239 aa15.84■□□□□ 0.13
CDCA3-207ENST00000538862 ACTRT1Q8TDG2 376 aa15.84■□□□□ 0.13
CDCA3-207ENST00000538862 BORCS6Q96GS4 357 aa15.84■□□□□ 0.13
CDCA3-207ENST00000538862 ZIM3Q96PE6 472 aa15.84■□□□□ 0.13
CDCA3-207ENST00000538862 HSD17B14Q9BPX1 270 aa15.84■□□□□ 0.13
CDCA3-207ENST00000538862 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.84■□□□□ 0.13
CDCA3-207ENST00000538862 PACSIN2Q9UNF0 486 aaPredicted RBP15.84■□□□□ 0.13
CDCA3-207ENST00000538862 DOCK1Q14185 1865 aa15.83■□□□□ 0.12
CDCA3-207ENST00000538862 IGLV3-22A0A075B6J6 115 aa15.83■□□□□ 0.12
CDCA3-207ENST00000538862 FERP16591 822 aa15.83■□□□□ 0.12
CDCA3-207ENST00000538862 MUTP22033 750 aa15.83■□□□□ 0.12
CDCA3-207ENST00000538862 NPEPPSP55786 919 aa15.83■□□□□ 0.12
CDCA3-207ENST00000538862 CD302Q8IX05 232 aa15.83■□□□□ 0.12
CDCA3-207ENST00000538862 PLCD3Q8N3E9 789 aa15.83■□□□□ 0.12
CDCA3-207ENST00000538862 C1orf131Q8NDD1 294 aaKnown RBP15.83■□□□□ 0.12
CDCA3-207ENST00000538862 SCFD2Q8WU76 684 aa15.83■□□□□ 0.12
CDCA3-207ENST00000538862 BRI3BPQ8WY22 251 aa15.83■□□□□ 0.12
CDCA3-207ENST00000538862 CALR3Q96L12 384 aaKnown RBP15.83■□□□□ 0.12
CDCA3-207ENST00000538862 MKNK1Q9BUB5 465 aa15.83■□□□□ 0.12
CDCA3-207ENST00000538862 RASSF4Q9H2L5 321 aa15.83■□□□□ 0.12
CDCA3-207ENST00000538862 COL2A1P02458 1487 aaPredicted RBP15.82■□□□□ 0.12
CDCA3-207ENST00000538862 CCL15-CCL14A0A0B4J2E2 113 aa15.82■□□□□ 0.12
CDCA3-207ENST00000538862 EML1O00423 815 aa15.82■□□□□ 0.12
CDCA3-207ENST00000538862 KCNK3O14649 394 aa15.82■□□□□ 0.12
CDCA3-207ENST00000538862 GDF11O95390 407 aa15.82■□□□□ 0.12
CDCA3-207ENST00000538862 PSMC2P35998 433 aaKnown RBP15.82■□□□□ 0.12
CDCA3-207ENST00000538862 CASP4P49662 377 aa15.82■□□□□ 0.12
CDCA3-207ENST00000538862 DNA2P51530 1060 aa15.82■□□□□ 0.12
CDCA3-207ENST00000538862 MAP3K10Q02779 954 aa15.82■□□□□ 0.12
CDCA3-207ENST00000538862 CYP4A11Q02928 519 aa15.82■□□□□ 0.12
CDCA3-207ENST00000538862 CCL15Q16663 113 aa15.82■□□□□ 0.12
CDCA3-207ENST00000538862 TTMPQ5BVD1 217 aa15.82■□□□□ 0.12
CDCA3-207ENST00000538862 DNAJC21Q5F1R6 531 aaKnown RBP15.82■□□□□ 0.12
CDCA3-207ENST00000538862 TCERG1LQ5VWI1 586 aa15.82■□□□□ 0.12
CDCA3-207ENST00000538862 SLFN11Q7Z7L1 901 aa15.82■□□□□ 0.12
CDCA3-207ENST00000538862 TPCN2Q8NHX9 752 aa15.82■□□□□ 0.12
CDCA3-207ENST00000538862 CASKIN2Q8WXE0 1202 aa15.82■□□□□ 0.12
CDCA3-207ENST00000538862 IFT81Q8WYA0 676 aa15.82■□□□□ 0.12
CDCA3-207ENST00000538862 GCNT4Q9P109 453 aa15.82■□□□□ 0.12
CDCA3-207ENST00000538862 UBE4BO95155 1302 aa15.82■□□□□ 0.12
CDCA3-207ENST00000538862 TGFB1I1O43294 461 aa15.82■□□□□ 0.12
CDCA3-207ENST00000538862 FAM13AO94988 1023 aa15.82■□□□□ 0.12
CDCA3-207ENST00000538862 H2AFZP0C0S5 128 aa15.82■□□□□ 0.12
CDCA3-207ENST00000538862 HOXA13P31271 388 aaPredicted RBP15.82■□□□□ 0.12
CDCA3-207ENST00000538862 NOP2P46087 812 aaKnown RBP15.82■□□□□ 0.12
CDCA3-207ENST00000538862 RRP1BQ14684 758 aaKnown RBP15.82■□□□□ 0.12
CDCA3-207ENST00000538862 NOL9Q5SY16 702 aaKnown RBP15.82■□□□□ 0.12
CDCA3-207ENST00000538862 EMC10Q5UCC4 262 aa15.82■□□□□ 0.12
CDCA3-207ENST00000538862 C1orf186Q6ZWK4 172 aa15.82■□□□□ 0.12
CDCA3-207ENST00000538862 H2AFVQ71UI9 128 aa15.82■□□□□ 0.12
CDCA3-207ENST00000538862 OTOP1Q7RTM1 612 aa15.82■□□□□ 0.12
CDCA3-207ENST00000538862 SYCE1Q8N0S2 351 aa15.82■□□□□ 0.12
CDCA3-207ENST00000538862 CYP2W1Q8TAV3 490 aa15.82■□□□□ 0.12
CDCA3-207ENST00000538862 ARL8AQ96BM9 186 aa15.82■□□□□ 0.12
CDCA3-207ENST00000538862 CCDC43Q96MW1 224 aaKnown RBP15.82■□□□□ 0.12
CDCA3-207ENST00000538862 ISCUQ9H1K1 167 aa15.82■□□□□ 0.12
CDCA3-207ENST00000538862 RGL1Q9NZL6 768 aa15.82■□□□□ 0.12
CDCA3-207ENST00000538862 SEL1LQ9UBV2 794 aa15.82■□□□□ 0.12
CDCA3-207ENST00000538862 PRR12Q9ULL5 1215 aa15.82■□□□□ 0.12
CDCA3-207ENST00000538862 CLIC2O15247 247 aa15.81■□□□□ 0.12
CDCA3-207ENST00000538862 EIF3HO15372 352 aaKnown RBP eCLIP15.81■□□□□ 0.12
CDCA3-207ENST00000538862 RAD51CO43502 376 aa15.81■□□□□ 0.12
CDCA3-207ENST00000538862 SLITRK3O94933 977 aa15.81■□□□□ 0.12
CDCA3-207ENST00000538862 FAM153BP0C7A2 387 aa15.81■□□□□ 0.12
CDCA3-207ENST00000538862 STAT1P42224 750 aa15.81■□□□□ 0.12
CDCA3-207ENST00000538862 GTF2A2P52657 109 aa15.81■□□□□ 0.12
CDCA3-207ENST00000538862 INHBEP58166 350 aa15.81■□□□□ 0.12
CDCA3-207ENST00000538862 PPATQ06203 517 aa15.81■□□□□ 0.12
CDCA3-207ENST00000538862 PPIL2Q13356 520 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms