RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 PCNX4Q63HM2 1172 aa27.07■■□□□ 1.92
RAB40C-204ENST00000538492 PHLDB3Q6NSJ2 640 aa27.07■■□□□ 1.92
RAB40C-204ENST00000538492 SLC30A5Q8TAD4 765 aa27.07■■□□□ 1.92
RAB40C-204ENST00000538492 LRRN2O75325 713 aa27.07■■□□□ 1.92
RAB40C-204ENST00000538492 FAM153BP0C7A2 387 aa27.07■■□□□ 1.92
RAB40C-204ENST00000538492 QARSP47897 775 aaKnown RBP27.07■■□□□ 1.92
RAB40C-204ENST00000538492 RPS6P62753 249 aaKnown RBP27.07■■□□□ 1.92
RAB40C-204ENST00000538492 FAM153CQ494X1 144 aa27.07■■□□□ 1.92
RAB40C-204ENST00000538492 LEKR1Q6ZMV7 388 aa27.07■■□□□ 1.92
RAB40C-204ENST00000538492 OSGEPQ9NPF4 335 aa27.07■■□□□ 1.92
RAB40C-204ENST00000538492 FAM153AQ9UHL3 310 aa27.07■■□□□ 1.92
RAB40C-204ENST00000538492 RAD51CO43502 376 aa27.06■■□□□ 1.92
RAB40C-204ENST00000538492 ABCB4P21439 1286 aa27.06■■□□□ 1.92
RAB40C-204ENST00000538492 SLC9A9Q8IVB4 645 aa27.06■■□□□ 1.92
RAB40C-204ENST00000538492 METTL13Q8N6R0 699 aa27.06■■□□□ 1.92
RAB40C-204ENST00000538492 CBWD1Q9BRT8 395 aa27.06■■□□□ 1.92
RAB40C-204ENST00000538492 SLC38A10Q9HBR0 1119 aa27.06■■□□□ 1.92
RAB40C-204ENST00000538492 SEPT11Q9NVA2 429 aaKnown RBP27.06■■□□□ 1.92
RAB40C-204ENST00000538492 UGCGQ16739 394 aa27.06■■□□□ 1.92
RAB40C-204ENST00000538492 CIAPIN1Q6FI81 312 aa27.06■■□□□ 1.92
RAB40C-204ENST00000538492 ZSWIM2Q8NEG5 633 aa27.06■■□□□ 1.92
RAB40C-204ENST00000538492 CAVIN3Q969G5 261 aa27.06■■□□□ 1.92
RAB40C-204ENST00000538492 CCDC43Q96MW1 224 aaKnown RBP27.06■■□□□ 1.92
RAB40C-204ENST00000538492 AP1M1Q9BXS5 423 aa27.06■■□□□ 1.92
RAB40C-204ENST00000538492 FER1L6Q2WGJ9 1857 aa27.06■■□□□ 1.92
RAB40C-204ENST00000538492 KRT13P13646 458 aa27.05■■□□□ 1.92
RAB40C-204ENST00000538492 YWHABP31946 246 aaKnown RBP27.05■■□□□ 1.92
RAB40C-204ENST00000538492 LPAR1Q92633 364 aa27.05■■□□□ 1.92
RAB40C-204ENST00000538492 PBKQ96KB5 322 aa27.05■■□□□ 1.92
RAB40C-204ENST00000538492 TEPSINQ96N21 525 aa27.05■■□□□ 1.92
RAB40C-204ENST00000538492 GPRC5CQ9NQ84 441 aa27.05■■□□□ 1.92
RAB40C-204ENST00000538492 EMSYQ7Z589 1322 aa27.05■■□□□ 1.92
RAB40C-204ENST00000538492 TNNC1P63316 161 aa27.05■■□□□ 1.92
RAB40C-204ENST00000538492 KCTD19Q17RG1 926 aaPredicted RBP27.05■■□□□ 1.92
RAB40C-204ENST00000538492 NIPA1Q7RTP0 329 aa27.05■■□□□ 1.92
RAB40C-204ENST00000538492 CASKIN2Q8WXE0 1202 aa27.05■■□□□ 1.92
RAB40C-204ENST00000538492 KIAA1683Q9H0B3 1180 aa27.05■■□□□ 1.92
RAB40C-204ENST00000538492 TMEM59LQ9UK28 342 aa27.05■■□□□ 1.92
RAB40C-204ENST00000538492 ATP9AO75110 1047 aa27.04■■□□□ 1.92
RAB40C-204ENST00000538492 LMNB1P20700 586 aa27.04■■□□□ 1.92
RAB40C-204ENST00000538492 MTMR2Q13614 643 aa27.04■■□□□ 1.92
RAB40C-204ENST00000538492 LMBR1Q8WVP7 490 aa27.04■■□□□ 1.92
RAB40C-204ENST00000538492 INTUQ9ULD6 942 aa27.04■■□□□ 1.92
RAB40C-204ENST00000538492 A0A0A6YYK5 440 aaPredicted RBP27.04■■□□□ 1.92
RAB40C-204ENST00000538492 FOXN3O00409 490 aaPredicted RBP27.04■■□□□ 1.92
RAB40C-204ENST00000538492 CES2O00748 559 aa27.04■■□□□ 1.92
RAB40C-204ENST00000538492 PLS3P13797 630 aa27.04■■□□□ 1.92
RAB40C-204ENST00000538492 GUCY2FP51841 1108 aa27.04■■□□□ 1.92
RAB40C-204ENST00000538492 PGM5Q15124 567 aa27.04■■□□□ 1.92
RAB40C-204ENST00000538492 PALB2Q86YC2 1186 aa27.04■■□□□ 1.92
RAB40C-204ENST00000538492 PROCA1Q8NCQ7 364 aaPredicted RBP27.04■■□□□ 1.92
RAB40C-204ENST00000538492 LMO3Q8TAP4 145 aa27.04■■□□□ 1.92
RAB40C-204ENST00000538492 TMEM206Q9H813 350 aa27.04■■□□□ 1.92
RAB40C-204ENST00000538492 DBR1Q9UK59 544 aaKnown RBP27.04■■□□□ 1.92
RAB40C-204ENST00000538492 GOLGA6CA6NDK9 693 aa27.04■■□□□ 1.92
RAB40C-204ENST00000538492 GOLGA6DP0CG33 693 aa27.04■■□□□ 1.92
RAB40C-204ENST00000538492 SLFN11Q7Z7L1 901 aa27.04■■□□□ 1.92
RAB40C-204ENST00000538492 SLC35G2Q8TBE7 412 aa27.04■■□□□ 1.92
RAB40C-204ENST00000538492 ACCSQ96QU6 501 aa27.04■■□□□ 1.92
RAB40C-204ENST00000538492 GOLGA6AQ9NYA3 693 aa27.04■■□□□ 1.92
RAB40C-204ENST00000538492 TAS2R14Q9NYV8 317 aa27.04■■□□□ 1.92
RAB40C-204ENST00000538492 IGSF9BQ9UPX0 1349 aa27.03■■□□□ 1.92
RAB40C-204ENST00000538492 BACH1O14867 736 aa27.03■■□□□ 1.92
RAB40C-204ENST00000538492 ZBTB48P10074 688 aaPredicted RBP27.03■■□□□ 1.92
RAB40C-204ENST00000538492 VCAM1P19320 739 aa27.03■■□□□ 1.92
RAB40C-204ENST00000538492 GCLMP48507 274 aa27.03■■□□□ 1.92
RAB40C-204ENST00000538492 PPP3CAQ08209 521 aa27.03■■□□□ 1.92
RAB40C-204ENST00000538492 PAK2Q13177 524 aa27.03■■□□□ 1.92
RAB40C-204ENST00000538492 SYT11Q9BT88 431 aa27.03■■□□□ 1.92
RAB40C-204ENST00000538492 VPS33BQ9H267 617 aa27.03■■□□□ 1.92
RAB40C-204ENST00000538492 CTDP1Q9Y5B0 961 aaPredicted RBP27.03■■□□□ 1.92
RAB40C-204ENST00000538492 VAMP7P51809 220 aa27.03■■□□□ 1.92
RAB40C-204ENST00000538492 NSMFQ6X4W1 530 aa27.03■■□□□ 1.92
RAB40C-204ENST00000538492 HAUS6Q7Z4H7 955 aa27.03■■□□□ 1.92
RAB40C-204ENST00000538492 NT5DC3Q86UY8 548 aa27.03■■□□□ 1.92
RAB40C-204ENST00000538492 ACTRT1Q8TDG2 376 aa27.03■■□□□ 1.92
RAB40C-204ENST00000538492 UBE2TQ9NPD8 197 aaPredicted RBP27.03■■□□□ 1.92
RAB40C-204ENST00000538492 UTP3Q9NQZ2 479 aaKnown RBP eCLIP27.03■■□□□ 1.925e-7■■■■■ 225.8
RAB40C-204ENST00000538492 STXBP5LQ9Y2K9 1186 aa27.03■■□□□ 1.92
RAB40C-204ENST00000538492 NOC2LQ9Y3T9 749 aaKnown RBP27.03■■□□□ 1.92
RAB40C-204ENST00000538492 ASTN2O75129 1339 aaPredicted RBP27.02■■□□□ 1.92
RAB40C-204ENST00000538492 SLC16A4O15374 487 aa27.02■■□□□ 1.92
RAB40C-204ENST00000538492 HSF2BPO75031 334 aa27.02■■□□□ 1.92
RAB40C-204ENST00000538492 PEX3P56589 373 aa27.02■■□□□ 1.92
RAB40C-204ENST00000538492 PLA2G4FQ68DD2 849 aa27.02■■□□□ 1.92
RAB40C-204ENST00000538492 INTS8Q75QN2 995 aaKnown RBP27.02■■□□□ 1.92
RAB40C-204ENST00000538492 RMDN3Q96TC7 470 aa27.02■■□□□ 1.92
RAB40C-204ENST00000538492 TBC1D22BQ9NU19 505 aa27.02■■□□□ 1.92
RAB40C-204ENST00000538492 ATP8B3O60423 1300 aa27.02■■□□□ 1.92
RAB40C-204ENST00000538492 TESPA1A2RU30 521 aaPredicted RBP27.02■■□□□ 1.92
RAB40C-204ENST00000538492 PGRMC1O00264 195 aaKnown RBP27.02■■□□□ 1.92
RAB40C-204ENST00000538492 BUB1BO60566 1050 aaPredicted RBP27.02■■□□□ 1.92
RAB40C-204ENST00000538492 TNFAIP3P21580 790 aa27.02■■□□□ 1.92
RAB40C-204ENST00000538492 NPEPPSP55786 919 aa27.02■■□□□ 1.92
RAB40C-204ENST00000538492 FAM76AQ8TAV0 307 aa27.02■■□□□ 1.92
RAB40C-204ENST00000538492 CTNNBL1Q8WYA6 563 aaPredicted RBP27.02■■□□□ 1.92
RAB40C-204ENST00000538492 JDP2Q8WYK2 163 aa27.02■■□□□ 1.92
RAB40C-204ENST00000538492 WNK4Q96J92 1243 aa27.02■■□□□ 1.92
RAB40C-204ENST00000538492 RUFY1Q96T51 708 aa27.02■■□□□ 1.92
RAB40C-204ENST00000538492 HSPBP1Q9NZL4 362 aa27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms