RNA–Protein interactions for RNA: ENST00000538410.5

COPS7A-208, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3 BASIC

Gene COPS7A, Length 1,610 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-208ENST00000538410 PEX3P56589 373 aa22.68■■□□□ 1.22
COPS7A-208ENST00000538410 TPM4P67936 248 aa22.68■■□□□ 1.22
COPS7A-208ENST00000538410 PURAQ00577 322 aaKnown RBP22.68■■□□□ 1.22
COPS7A-208ENST00000538410 BMT2Q1RMZ1 405 aa22.68■■□□□ 1.22
COPS7A-208ENST00000538410 GNASQ5JWF2 1037 aa22.68■■□□□ 1.22
COPS7A-208ENST00000538410 TMEM143Q96AN5 459 aa22.68■■□□□ 1.22
COPS7A-208ENST00000538410 PHF24Q9UPV7 400 aa22.68■■□□□ 1.22
COPS7A-208ENST00000538410 NFE2L3Q9Y4A8 694 aa22.68■■□□□ 1.22
COPS7A-208ENST00000538410 TRIP12Q14669 1992 aaPredicted RBP22.67■■□□□ 1.22
COPS7A-208ENST00000538410 BICDL2A1A5D9 508 aa22.67■■□□□ 1.22
COPS7A-208ENST00000538410 HAS3O00219 553 aa22.67■■□□□ 1.22
COPS7A-208ENST00000538410 PSEN2P49810 448 aa22.67■■□□□ 1.22
COPS7A-208ENST00000538410 NCKAP1LP55160 1127 aa22.67■■□□□ 1.22
COPS7A-208ENST00000538410 DMP1Q13316 513 aaPredicted RBP22.67■■□□□ 1.22
COPS7A-208ENST00000538410 MFSD10Q14728 455 aa22.67■■□□□ 1.22
COPS7A-208ENST00000538410 KIAA0753Q2KHM9 967 aa22.67■■□□□ 1.22
COPS7A-208ENST00000538410 TTI2Q6NXR4 508 aa22.67■■□□□ 1.22
COPS7A-208ENST00000538410 STXBP4Q6ZWJ1 553 aa22.67■■□□□ 1.22
COPS7A-208ENST00000538410 SLC17A8Q8NDX2 589 aa22.67■■□□□ 1.22
COPS7A-208ENST00000538410 SPIRE2Q8WWL2 714 aa22.67■■□□□ 1.22
COPS7A-208ENST00000538410 BSNDQ8WZ55 320 aa22.67■■□□□ 1.22
COPS7A-208ENST00000538410 NTPCRQ9BSD7 190 aaKnown RBP22.67■■□□□ 1.22
COPS7A-208ENST00000538410 STRA6Q9BX79 667 aa22.67■■□□□ 1.22
COPS7A-208ENST00000538410 HSD3B7Q9H2F3 369 aa22.67■■□□□ 1.22
COPS7A-208ENST00000538410 FANCLQ9NW38 375 aa22.67■■□□□ 1.22
COPS7A-208ENST00000538410 PCDHB13Q9Y5F0 798 aa22.67■■□□□ 1.22
COPS7A-208ENST00000538410 UBE4BO95155 1302 aa22.67■■□□□ 1.22
COPS7A-208ENST00000538410 K7ENM7 598 aa22.66■■□□□ 1.22
COPS7A-208ENST00000538410 PRPF6O94906 941 aaKnown RBP22.66■■□□□ 1.22
COPS7A-208ENST00000538410 C22orf31O95567 290 aa22.66■■□□□ 1.22
COPS7A-208ENST00000538410 NPTX2P47972 431 aa22.66■■□□□ 1.22
COPS7A-208ENST00000538410 SMTNP53814 917 aa22.66■■□□□ 1.22
COPS7A-208ENST00000538410 IGBP1P78318 339 aa22.66■■□□□ 1.22
COPS7A-208ENST00000538410 PPFIA1Q13136 1202 aa22.66■■□□□ 1.22
COPS7A-208ENST00000538410 ZC2HC1CQ53FD0 456 aaPredicted RBP22.66■■□□□ 1.22
COPS7A-208ENST00000538410 IER5Q5VY09 327 aa22.66■■□□□ 1.22
COPS7A-208ENST00000538410 ANKRD40Q6AI12 368 aa22.66■■□□□ 1.22
COPS7A-208ENST00000538410 TCP11Q8WWU5 503 aa22.66■■□□□ 1.22
COPS7A-208ENST00000538410 IFT74Q96LB3 600 aa22.66■■□□□ 1.22
COPS7A-208ENST00000538410 GDF15Q99988 308 aa22.66■■□□□ 1.22
COPS7A-208ENST00000538410 KATNAL1Q9BW62 490 aa22.66■■□□□ 1.22
COPS7A-208ENST00000538410 ST6GALNAC4Q9H4F1 302 aa22.66■■□□□ 1.22
COPS7A-208ENST00000538410 KCNG1Q9UIX4 513 aa22.66■■□□□ 1.22
COPS7A-208ENST00000538410 ATP11BQ9Y2G3 1177 aa22.66■■□□□ 1.22
COPS7A-208ENST00000538410 MAGEB2O15479 319 aa22.65■■□□□ 1.22
COPS7A-208ENST00000538410 ZEB2O60315 1214 aa22.65■■□□□ 1.22
COPS7A-208ENST00000538410 PPP1R37O75864 691 aa22.65■■□□□ 1.22
COPS7A-208ENST00000538410 HOXD13P35453 343 aa22.65■■□□□ 1.22
COPS7A-208ENST00000538410 FXR1P51114 621 aaKnown RBP eCLIP22.65■■□□□ 1.22
COPS7A-208ENST00000538410 ALCAMQ13740 583 aa22.65■■□□□ 1.22
COPS7A-208ENST00000538410 GRIK4Q16099 956 aa22.65■■□□□ 1.22
COPS7A-208ENST00000538410 TPD52L1Q16890 204 aaPredicted RBP22.65■■□□□ 1.22
COPS7A-208ENST00000538410 FOXR2Q6PJQ5 311 aa22.65■■□□□ 1.22
COPS7A-208ENST00000538410 NELFCDQ8IXH7 590 aa22.65■■□□□ 1.22
COPS7A-208ENST00000538410 KLHDC9Q8NEP7 349 aa22.65■■□□□ 1.22
COPS7A-208ENST00000538410 TSEN34Q9BSV6 310 aaKnown RBP22.65■■□□□ 1.22
COPS7A-208ENST00000538410 KCTD10Q9H3F6 313 aa22.65■■□□□ 1.22
COPS7A-208ENST00000538410 SUGCTQ9HAC7 445 aa22.65■■□□□ 1.22
COPS7A-208ENST00000538410 A0A1W2PPC1 479 aa22.64■■□□□ 1.22
COPS7A-208ENST00000538410 RRN3P2A6NIE6 340 aa22.64■■□□□ 1.22
COPS7A-208ENST00000538410 CCDC169A6NNP5 214 aa22.64■■□□□ 1.22
COPS7A-208ENST00000538410 KLRC1P26715 233 aa22.64■■□□□ 1.22
COPS7A-208ENST00000538410 CST5P28325 142 aaPredicted RBP22.64■■□□□ 1.22
COPS7A-208ENST00000538410 BMP8BP34820 402 aa22.64■■□□□ 1.22
COPS7A-208ENST00000538410 MKRN4PQ13434 485 aaPredicted RBP22.64■■□□□ 1.22
COPS7A-208ENST00000538410 HAUS6Q7Z4H7 955 aa22.64■■□□□ 1.22
COPS7A-208ENST00000538410 RETREG2Q8NC44 543 aa22.64■■□□□ 1.22
COPS7A-208ENST00000538410 ASAP3Q8TDY4 903 aa22.64■■□□□ 1.22
COPS7A-208ENST00000538410 DUSP9Q99956 384 aaKnown RBP22.64■■□□□ 1.22
COPS7A-208ENST00000538410 MTG1Q9BT17 334 aaPredicted RBP22.64■■□□□ 1.22
COPS7A-208ENST00000538410 KMT5AQ9NQR1 393 aa22.64■■□□□ 1.22
COPS7A-208ENST00000538410 TRIOBPQ9H2D6 2365 aa22.64■■□□□ 1.21
COPS7A-208ENST00000538410 SLC16A4O15374 487 aa22.64■■□□□ 1.21
COPS7A-208ENST00000538410 SMIM10L2AP0DMW4 78 aa22.64■■□□□ 1.21
COPS7A-208ENST00000538410 SMIM10L2BP0DMW5 78 aa22.64■■□□□ 1.21
COPS7A-208ENST00000538410 GLRA2P23416 452 aa22.64■■□□□ 1.21
COPS7A-208ENST00000538410 MAGEA10P43363 369 aaPredicted RBP22.64■■□□□ 1.21
COPS7A-208ENST00000538410 GTF2BQ00403 316 aa22.64■■□□□ 1.21
COPS7A-208ENST00000538410 LRRC63Q05C16 580 aa22.64■■□□□ 1.21
COPS7A-208ENST00000538410 DRP2Q13474 957 aa22.64■■□□□ 1.21
COPS7A-208ENST00000538410 SNX17Q15036 470 aa22.64■■□□□ 1.21
COPS7A-208ENST00000538410 PPP2R5AQ15172 486 aa22.64■■□□□ 1.21
COPS7A-208ENST00000538410 KNOP1Q1ED39 458 aaKnown RBP22.64■■□□□ 1.21
COPS7A-208ENST00000538410 EFCAB12Q6NXP0 572 aa22.64■■□□□ 1.21
COPS7A-208ENST00000538410 LRRC71Q8N4P6 559 aa22.64■■□□□ 1.21
COPS7A-208ENST00000538410 TSG101Q99816 390 aa22.64■■□□□ 1.21
COPS7A-208ENST00000538410 SAMSN1Q9NSI8 373 aaKnown RBP22.64■■□□□ 1.21
COPS7A-208ENST00000538410 PRKAG2Q9UGJ0 569 aa22.64■■□□□ 1.21
COPS7A-208ENST00000538410 DNAH12Q6ZR08 3092 aa22.63■■□□□ 1.21
COPS7A-208ENST00000538410 NAMPTP43490 491 aa22.63■■□□□ 1.21
COPS7A-208ENST00000538410 CHMP4BP1P59074 171 aa22.63■■□□□ 1.21
COPS7A-208ENST00000538410 TRIM60Q495X7 471 aa22.63■■□□□ 1.21
COPS7A-208ENST00000538410 ZCWPW2Q504Y3 356 aa22.63■■□□□ 1.21
COPS7A-208ENST00000538410 MARCH8Q5T0T0 291 aa22.63■■□□□ 1.21
COPS7A-208ENST00000538410 C1orf53Q5VUE5 145 aa22.63■■□□□ 1.21
COPS7A-208ENST00000538410 MTHFD1LQ6UB35 978 aa22.63■■□□□ 1.21
COPS7A-208ENST00000538410 LINC01465Q8N7H1 131 aa22.63■■□□□ 1.21
COPS7A-208ENST00000538410 TMEM161BQ8NDZ6 487 aa22.63■■□□□ 1.21
COPS7A-208ENST00000538410 ZBTB10Q96DT7 871 aa22.63■■□□□ 1.21
COPS7A-208ENST00000538410 SETD4Q9NVD3 440 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms