RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 UBN2Q6ZU65 1347 aa6.03□□□□□ -1.44
CSMD1-215ENST00000537824 CCDC22O60826 627 aa6.02□□□□□ -1.44
CSMD1-215ENST00000537824 ANGPTL8Q6UXH0 198 aa6.02□□□□□ -1.44
CSMD1-215ENST00000537824 PARD3BQ8TEW8 1205 aa6.02□□□□□ -1.44
CSMD1-215ENST00000537824 ATP6V1E2Q96A05 226 aa6.02□□□□□ -1.44
CSMD1-215ENST00000537824 PPP1R36Q96LQ0 422 aa6.02□□□□□ -1.44
CSMD1-215ENST00000537824 GOLPH3LQ9H4A5 285 aa6.02□□□□□ -1.44
CSMD1-215ENST00000537824 ZWILCHQ9H900 591 aa6.02□□□□□ -1.44
CSMD1-215ENST00000537824 MAP3K19Q56UN5 1328 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 GOLGA8JA6NMD2 632 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 SEMA3EO15041 775 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 PLCG1P19174 1290 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 ZNF211Q13398 564 aaPredicted RBP6.02□□□□□ -1.45
CSMD1-215ENST00000537824 PLEKHA7Q6IQ23 1121 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 DNAJC24Q6P3W2 148 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 CDAN1Q8IWY9 1227 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 RNF217Q8TC41 542 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 EME1Q96AY2 570 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 DDX25Q9UHL0 483 aaKnown RBP6.02□□□□□ -1.45
CSMD1-215ENST00000537824 DBR1Q9UK59 544 aaKnown RBP6.02□□□□□ -1.45
CSMD1-215ENST00000537824 ADGRF5Q8IZF2 1346 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 SMCO2A6NFE2 343 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 MFN2O95140 757 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 PMLP29590 882 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 CLK1P49759 484 aaKnown RBP6.02□□□□□ -1.45
CSMD1-215ENST00000537824 TRIM67Q6ZTA4 783 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 MB21D1Q8N884 522 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 MYCLP12524 364 aaPredicted RBP6.02□□□□□ -1.45
CSMD1-215ENST00000537824 ARHGDIAP52565 204 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 SMAD1Q15797 465 aaKnown RBP6.02□□□□□ -1.45
CSMD1-215ENST00000537824 HADHQ16836 314 aaKnown RBP6.02□□□□□ -1.45
CSMD1-215ENST00000537824 ZNF658Q5TYW1 1059 aaPredicted RBP6.02□□□□□ -1.45
CSMD1-215ENST00000537824 CNDP1Q96KN2 507 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 SLC13A4Q9UKG4 626 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 THOC5Q13769 683 aaKnown RBP6.02□□□□□ -1.45
CSMD1-215ENST00000537824 OASLQ15646 514 aaKnown RBP6.02□□□□□ -1.45
CSMD1-215ENST00000537824 PREPLQ4J6C6 727 aaPredicted RBP6.02□□□□□ -1.45
CSMD1-215ENST00000537824 NSMFQ6X4W1 530 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 PRPF39Q86UA1 669 aaKnown RBP6.02□□□□□ -1.45
CSMD1-215ENST00000537824 ZNF786Q8N393 782 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 PPM1NQ8N819 430 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 NSL1Q96IY1 281 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 RAD21L1Q9H4I0 556 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 NUP160Q12769 1436 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 TBC1D4O60343 1298 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 LPXNO60711 386 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 ITIH4Q14624 930 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 C16orf72Q14CZ0 275 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 DNAAF3Q8N9W5 541 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 QKIQ96PU8 341 aaKnown RBP eCLIP6.02□□□□□ -1.457e-33■■■■■ 356
CSMD1-215ENST00000537824 GOLGA8RI6L899 631 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 ZSCAN9O15535 394 aaPredicted RBP6.02□□□□□ -1.45
CSMD1-215ENST00000537824 ATP5JP18859 108 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 AARSP49588 968 aaKnown RBP eCLIP6.02□□□□□ -1.45
CSMD1-215ENST00000537824 ZC3H12BQ5HYM0 836 aaKnown RBP6.02□□□□□ -1.45
CSMD1-215ENST00000537824 LPCAT2Q7L5N7 544 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 NUP93Q8N1F7 819 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 NAF1Q96HR8 494 aaKnown RBP6.02□□□□□ -1.45
CSMD1-215ENST00000537824 PGBD1Q96JS3 809 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 MTRQ99707 1265 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 ASPSCR1Q9BZE9 553 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.02□□□□□ -1.45
CSMD1-215ENST00000537824 SPTAN1Q13813 2472 aaKnown RBP6.02□□□□□ -1.45
CSMD1-215ENST00000537824 NR2F2P24468 414 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 PDIA3P30101 505 aaKnown RBP6.02□□□□□ -1.45
CSMD1-215ENST00000537824 HIC1Q14526 733 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 TSHZ1Q6ZSZ6 1077 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 CALN1Q9BXU9 219 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 ANO3Q9BYT9 981 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 CAAP1Q9H8G2 361 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 FAM153AQ9UHL3 310 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 USP19O94966 1318 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 CDHR2Q9BYE9 1310 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 ZNF839A8K0R7 811 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 LCA5LO95447 670 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 GSTT1P30711 240 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 CDC26Q8NHZ8 85 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 XAGE2Q96GT9 111 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 IRX2Q9BZI1 471 aaPredicted RBP6.02□□□□□ -1.45
CSMD1-215ENST00000537824 SMARCAL1Q9NZC9 954 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 SNX12Q9UMY4 172 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 AP3B1O00203 1094 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 DGKIO75912 1065 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 SERPINB8P50452 374 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 PSMC6P62333 389 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 LRRC41Q15345 812 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 CSRNP1Q96S65 589 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 MED10Q9BTT4 135 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 BHMT2Q9H2M3 363 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 DDX18Q9NVP1 670 aaKnown RBP6.02□□□□□ -1.45
CSMD1-215ENST00000537824 FOXO3O43524 673 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 CDC25CP30307 473 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 ROR2Q01974 943 aaKnown RBP6.02□□□□□ -1.45
CSMD1-215ENST00000537824 EIF4A2Q14240 407 aaKnown RBP6.02□□□□□ -1.45
CSMD1-215ENST00000537824 PUM3Q15397 648 aaKnown RBP6.02□□□□□ -1.45
CSMD1-215ENST00000537824 TRIM74Q86UV6 250 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 TRIM73Q86UV7 250 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 MTBPQ96DY7 904 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 DSCC1Q9BVC3 393 aa6.02□□□□□ -1.45
CSMD1-215ENST00000537824 ZNF277Q9NRM2 450 aaPredicted RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms