RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 GCFC2P16383 781 aaKnown RBP12.71□□□□□ -0.37
CHRNB1-202ENST00000536404 ALDH5A1P51649 535 aaPredicted RBP12.71□□□□□ -0.37
CHRNB1-202ENST00000536404 KIF5AQ12840 1032 aa12.71□□□□□ -0.37
CHRNB1-202ENST00000536404 SPA17Q15506 151 aa12.71□□□□□ -0.37
CHRNB1-202ENST00000536404 FSCN1Q16658 493 aaKnown RBP12.71□□□□□ -0.37
CHRNB1-202ENST00000536404 PFKFB3Q16875 520 aaPredicted RBP12.71□□□□□ -0.37
CHRNB1-202ENST00000536404 DGKHQ86XP1 1220 aa12.71□□□□□ -0.37
CHRNB1-202ENST00000536404 SMYD4Q8IYR2 804 aaPredicted RBP12.71□□□□□ -0.37
CHRNB1-202ENST00000536404 NOA1Q8NC60 698 aaKnown RBP12.71□□□□□ -0.37
CHRNB1-202ENST00000536404 TRIM58Q8NG06 486 aa12.71□□□□□ -0.37
CHRNB1-202ENST00000536404 FAM76AQ8TAV0 307 aa12.71□□□□□ -0.37
CHRNB1-202ENST00000536404 RNPC3Q96LT9 517 aaKnown RBP12.71□□□□□ -0.37
CHRNB1-202ENST00000536404 AP5M1Q9H0R1 490 aa12.71□□□□□ -0.37
CHRNB1-202ENST00000536404 VTA1Q9NP79 307 aa12.71□□□□□ -0.37
CHRNB1-202ENST00000536404 GRIN2DO15399 1336 aa12.71□□□□□ -0.38
CHRNB1-202ENST00000536404 CNTNAP5Q8WYK1 1306 aa12.71□□□□□ -0.38
CHRNB1-202ENST00000536404 LRRC37A2A6NM11 1700 aa12.71□□□□□ -0.38
CHRNB1-202ENST00000536404 TTC26A0AVF1 554 aa12.7□□□□□ -0.38
CHRNB1-202ENST00000536404 TACC1O75410 805 aa12.7□□□□□ -0.38
CHRNB1-202ENST00000536404 RHOBTB3O94955 611 aa12.7□□□□□ -0.38
CHRNB1-202ENST00000536404 FGFR1OPO95684 399 aaKnown RBP12.7□□□□□ -0.38
CHRNB1-202ENST00000536404 ELF1P32519 619 aa12.7□□□□□ -0.38
CHRNB1-202ENST00000536404 PRCPP42785 496 aa12.7□□□□□ -0.38
CHRNB1-202ENST00000536404 APBA1Q02410 837 aa12.7□□□□□ -0.38
CHRNB1-202ENST00000536404 TROAPQ12815 778 aa12.7□□□□□ -0.38
CHRNB1-202ENST00000536404 PPFIA1Q13136 1202 aa12.7□□□□□ -0.38
CHRNB1-202ENST00000536404 FKBP15Q5T1M5 1219 aa12.7□□□□□ -0.38
CHRNB1-202ENST00000536404 ZNF697Q5TEC3 545 aa12.7□□□□□ -0.38
CHRNB1-202ENST00000536404 NCAPH2Q6IBW4 605 aa12.7□□□□□ -0.38
CHRNB1-202ENST00000536404 LRRC31Q6UY01 552 aa12.7□□□□□ -0.38
CHRNB1-202ENST00000536404 DTHD1Q6ZMT9 781 aa12.7□□□□□ -0.38
CHRNB1-202ENST00000536404 ZNF572Q7Z3I7 529 aaPredicted RBP12.7□□□□□ -0.38
CHRNB1-202ENST00000536404 FAM126BQ8IXS8 530 aa12.7□□□□□ -0.38
CHRNB1-202ENST00000536404 CMTR1Q8N1G2 835 aaKnown RBP12.7□□□□□ -0.38
CHRNB1-202ENST00000536404 MMGT1Q8N4V1 131 aa12.7□□□□□ -0.38
CHRNB1-202ENST00000536404 ZNF507Q8TCN5 953 aa12.7□□□□□ -0.38
CHRNB1-202ENST00000536404 CCSER1Q9C0I3 900 aa12.7□□□□□ -0.38
CHRNB1-202ENST00000536404 SEMA6BQ9H3T3 888 aa12.7□□□□□ -0.38
CHRNB1-202ENST00000536404 DISC1Q9NRI5 854 aa12.7□□□□□ -0.38
CHRNB1-202ENST00000536404 SHOX2O60902 331 aaPredicted RBP12.7□□□□□ -0.38
CHRNB1-202ENST00000536404 PRPF6O94906 941 aaKnown RBP12.7□□□□□ -0.38
CHRNB1-202ENST00000536404 TCP1P17987 556 aaKnown RBP12.7□□□□□ -0.38
CHRNB1-202ENST00000536404 TRIM21P19474 475 aaKnown RBP12.7□□□□□ -0.38
CHRNB1-202ENST00000536404 PRPHP41219 470 aa12.7□□□□□ -0.38
CHRNB1-202ENST00000536404 SMAD3P84022 425 aaKnown RBP12.7□□□□□ -0.38
CHRNB1-202ENST00000536404 AMPD3Q01432 767 aa12.7□□□□□ -0.38
CHRNB1-202ENST00000536404 AP1ARQ63HQ0 302 aa12.7□□□□□ -0.38
CHRNB1-202ENST00000536404 MFSD5Q6N075 450 aa12.7□□□□□ -0.38
CHRNB1-202ENST00000536404 CCNI2Q6ZMN8 369 aaPredicted RBP12.7□□□□□ -0.38
CHRNB1-202ENST00000536404 RNF207Q6ZRF8 634 aa12.7□□□□□ -0.38
CHRNB1-202ENST00000536404 PIK3AP1Q6ZUJ8 805 aa12.7□□□□□ -0.38
CHRNB1-202ENST00000536404 C16orf59Q7L2K0 433 aa12.7□□□□□ -0.38
CHRNB1-202ENST00000536404 SPATS2Q86XZ4 545 aaKnown RBP12.7□□□□□ -0.38
CHRNB1-202ENST00000536404 SLC43A3Q8NBI5 491 aa12.7□□□□□ -0.38
CHRNB1-202ENST00000536404 PNMA1Q8ND90 353 aa12.7□□□□□ -0.38
CHRNB1-202ENST00000536404 RASSF8Q8NHQ8 419 aa12.7□□□□□ -0.38
CHRNB1-202ENST00000536404 ANKS1AQ92625 1134 aa12.7□□□□□ -0.38
CHRNB1-202ENST00000536404 AK8Q96MA6 479 aa12.7□□□□□ -0.38
CHRNB1-202ENST00000536404 ALS2CR12Q96Q35 445 aa12.7□□□□□ -0.38
CHRNB1-202ENST00000536404 PPP1R12CQ9BZL4 782 aa12.7□□□□□ -0.38
CHRNB1-202ENST00000536404 BLZF1Q9H2G9 400 aa12.7□□□□□ -0.38
CHRNB1-202ENST00000536404 RNF14Q9UBS8 474 aa12.7□□□□□ -0.38
CHRNB1-202ENST00000536404 REXO2Q9Y3B8 237 aaKnown RBP12.7□□□□□ -0.38
CHRNB1-202ENST00000536404 MROH7Q68CQ1 1323 aa12.69□□□□□ -0.38
CHRNB1-202ENST00000536404 A0A1B0GUA9 196 aa12.69□□□□□ -0.38
CHRNB1-202ENST00000536404 GOLGA6BA6NDN3 693 aa12.69□□□□□ -0.38
CHRNB1-202ENST00000536404 FAM205CA6NFA0 338 aa12.69□□□□□ -0.38
CHRNB1-202ENST00000536404 PES1O00541 588 aaKnown RBP12.69□□□□□ -0.38
CHRNB1-202ENST00000536404 TLR3O15455 904 aaKnown RBP12.69□□□□□ -0.38
CHRNB1-202ENST00000536404 N4BP1O75113 896 aaKnown RBP12.69□□□□□ -0.38
CHRNB1-202ENST00000536404 CD4P01730 458 aa12.69□□□□□ -0.38
CHRNB1-202ENST00000536404 HNRNPH1P31943 449 aaKnown RBP12.69□□□□□ -0.38
CHRNB1-202ENST00000536404 UBA7P41226 1012 aa12.69□□□□□ -0.38
CHRNB1-202ENST00000536404 VAV2P52735 878 aa12.69□□□□□ -0.38
CHRNB1-202ENST00000536404 PSMC6P62333 389 aa12.69□□□□□ -0.38
CHRNB1-202ENST00000536404 RPS6P62753 249 aaKnown RBP12.69□□□□□ -0.38
CHRNB1-202ENST00000536404 ITGA7Q13683 1181 aa12.69□□□□□ -0.38
CHRNB1-202ENST00000536404 USH1GQ495M9 461 aa12.69□□□□□ -0.38
CHRNB1-202ENST00000536404 GLE1Q53GS7 698 aaKnown RBP12.69□□□□□ -0.38
CHRNB1-202ENST00000536404 COBLL1Q53SF7 1204 aa12.69□□□□□ -0.38
CHRNB1-202ENST00000536404 GPATCH4Q5T3I0 446 aaKnown RBP12.69□□□□□ -0.38
CHRNB1-202ENST00000536404 ALS2CLQ60I27 953 aa12.69□□□□□ -0.38
CHRNB1-202ENST00000536404 BLIDQ8IZY5 108 aa12.69□□□□□ -0.38
CHRNB1-202ENST00000536404 GIMAP8Q8ND71 665 aaPredicted RBP12.69□□□□□ -0.38
CHRNB1-202ENST00000536404 TBC1D5Q92609 795 aa12.69□□□□□ -0.38
CHRNB1-202ENST00000536404 CHP1Q99653 195 aa12.69□□□□□ -0.38
CHRNB1-202ENST00000536404 SH3GL3Q99963 347 aa12.69□□□□□ -0.38
CHRNB1-202ENST00000536404 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.69□□□□□ -0.38
CHRNB1-202ENST00000536404 WDR11Q9BZH6 1224 aa12.69□□□□□ -0.38
CHRNB1-202ENST00000536404 TTYH1Q9H313 450 aaPredicted RBP12.69□□□□□ -0.38
CHRNB1-202ENST00000536404 KAT14Q9H8E8 782 aa12.69□□□□□ -0.38
CHRNB1-202ENST00000536404 Q9Y3F1 56 aa12.69□□□□□ -0.38
CHRNB1-202ENST00000536404 MYH6P13533 1939 aa12.69□□□□□ -0.38
CHRNB1-202ENST00000536404 ABCB11O95342 1321 aa12.68□□□□□ -0.38
CHRNB1-202ENST00000536404 A0A0U1RQJ8 604 aa12.68□□□□□ -0.38
CHRNB1-202ENST00000536404 CCDC194A0A1B0GVG4 234 aa12.68□□□□□ -0.38
CHRNB1-202ENST00000536404 RBM47A0AV96 593 aaKnown RBP12.68□□□□□ -0.38
CHRNB1-202ENST00000536404 GOLGA6CA6NDK9 693 aa12.68□□□□□ -0.38
CHRNB1-202ENST00000536404 ZEB2O60315 1214 aa12.68□□□□□ -0.38
CHRNB1-202ENST00000536404 CABYRO75952 493 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms