RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 HAUS6Q7Z4H7 955 aa12.72□□□□□ -0.37
CDCA3-206ENST00000536241 GAS2L3Q86XJ1 694 aa12.72□□□□□ -0.37
CDCA3-206ENST00000536241 MLKLQ8NB16 471 aa12.72□□□□□ -0.37
CDCA3-206ENST00000536241 DNAJB3Q8WWF6 145 aa12.72□□□□□ -0.37
CDCA3-206ENST00000536241 SPIRE2Q8WWL2 714 aa12.72□□□□□ -0.37
CDCA3-206ENST00000536241 PSPC1Q8WXF1 523 aaKnown RBP12.72□□□□□ -0.37
CDCA3-206ENST00000536241 KIFC3Q9BVG8 833 aa12.72□□□□□ -0.37
CDCA3-206ENST00000536241 FAM49AQ9H0Q0 323 aaPredicted RBP12.72□□□□□ -0.37
CDCA3-206ENST00000536241 DNAJC25Q9H1X3 360 aa12.72□□□□□ -0.37
CDCA3-206ENST00000536241 TSPY26PQ9H489 355 aa12.72□□□□□ -0.37
CDCA3-206ENST00000536241 KMT5AQ9NQR1 393 aa12.72□□□□□ -0.37
CDCA3-206ENST00000536241 AKT3Q9Y243 479 aa12.72□□□□□ -0.37
CDCA3-206ENST00000536241 A0A0U1RQG5 324 aaPredicted RBP12.71□□□□□ -0.38
CDCA3-206ENST00000536241 LRRIQ4A6NIV6 560 aa12.71□□□□□ -0.38
CDCA3-206ENST00000536241 ASAP2O43150 1006 aa12.71□□□□□ -0.38
CDCA3-206ENST00000536241 MYBP10242 640 aa12.71□□□□□ -0.38
CDCA3-206ENST00000536241 MAPTP10636 758 aaKnown RBP12.71□□□□□ -0.38
CDCA3-206ENST00000536241 CDK7P50613 346 aa12.71□□□□□ -0.38
CDCA3-206ENST00000536241 PTPN11Q06124 597 aaPredicted RBP12.71□□□□□ -0.38
CDCA3-206ENST00000536241 PPP2R5AQ15172 486 aa12.71□□□□□ -0.38
CDCA3-206ENST00000536241 KLHL10Q6JEL2 608 aa12.71□□□□□ -0.38
CDCA3-206ENST00000536241 ADSSL1Q8N142 457 aa12.71□□□□□ -0.38
CDCA3-206ENST00000536241 SLC43A3Q8NBI5 491 aa12.71□□□□□ -0.38
CDCA3-206ENST00000536241 RNF149Q8NC42 400 aa12.71□□□□□ -0.38
CDCA3-206ENST00000536241 PPP1R16BQ96T49 567 aa12.71□□□□□ -0.38
CDCA3-206ENST00000536241 GTPBP4Q9BZE4 634 aaKnown RBP12.71□□□□□ -0.38
CDCA3-206ENST00000536241 TRMT13Q9NUP7 481 aaKnown RBP12.71□□□□□ -0.38
CDCA3-206ENST00000536241 KCNG1Q9UIX4 513 aa12.71□□□□□ -0.38
CDCA3-206ENST00000536241 K7ENM7 598 aa12.7□□□□□ -0.38
CDCA3-206ENST00000536241 NAMPTP43490 491 aa12.7□□□□□ -0.38
CDCA3-206ENST00000536241 ATN1P54259 1190 aaPredicted RBP12.7□□□□□ -0.38
CDCA3-206ENST00000536241 NCKAP1LP55160 1127 aa12.7□□□□□ -0.38
CDCA3-206ENST00000536241 NLRP11P59045 1033 aaKnown RBP12.7□□□□□ -0.38
CDCA3-206ENST00000536241 KCNA1Q09470 495 aa12.7□□□□□ -0.38
CDCA3-206ENST00000536241 TMEM62Q0P6H9 643 aa12.7□□□□□ -0.38
CDCA3-206ENST00000536241 CAPSQ13938 189 aa12.7□□□□□ -0.38
CDCA3-206ENST00000536241 L1TD1Q5T7N2 865 aaKnown RBP12.7□□□□□ -0.38
CDCA3-206ENST00000536241 SLC39A5Q6ZMH5 540 aa12.7□□□□□ -0.38
CDCA3-206ENST00000536241 EPM2AIP1Q7L775 607 aaPredicted RBP12.7□□□□□ -0.38
CDCA3-206ENST00000536241 NELFCDQ8IXH7 590 aa12.7□□□□□ -0.38
CDCA3-206ENST00000536241 MYOCDQ8IZQ8 938 aa12.7□□□□□ -0.38
CDCA3-206ENST00000536241 GUF1Q8N442 669 aaKnown RBP12.7□□□□□ -0.38
CDCA3-206ENST00000536241 TMEM161BQ8NDZ6 487 aa12.7□□□□□ -0.38
CDCA3-206ENST00000536241 DEPTORQ8TB45 409 aa12.7□□□□□ -0.38
CDCA3-206ENST00000536241 ZNF507Q8TCN5 953 aa12.7□□□□□ -0.38
CDCA3-206ENST00000536241 DIS3LQ8TF46 1054 aaKnown RBP12.7□□□□□ -0.38
CDCA3-206ENST00000536241 SCFD1Q8WVM8 642 aa12.7□□□□□ -0.38
CDCA3-206ENST00000536241 NLRP4Q96MN2 994 aa12.7□□□□□ -0.38
CDCA3-206ENST00000536241 CTAGE1Q96RT6 745 aa12.7□□□□□ -0.38
CDCA3-206ENST00000536241 MAP7D2Q96T17 732 aa12.7□□□□□ -0.38
CDCA3-206ENST00000536241 STRA6Q9BX79 667 aa12.7□□□□□ -0.38
CDCA3-206ENST00000536241 PCDHB13Q9Y5F0 798 aa12.7□□□□□ -0.38
CDCA3-206ENST00000536241 ADGRA3Q8IWK6 1321 aa12.69□□□□□ -0.38
CDCA3-206ENST00000536241 KIAA0100Q14667 2235 aaKnown RBP12.69□□□□□ -0.38
CDCA3-206ENST00000536241 A0A087WZ62 844 aa12.69□□□□□ -0.38
CDCA3-206ENST00000536241 B4GALT4O60513 344 aa12.69□□□□□ -0.38
CDCA3-206ENST00000536241 HOXD13P35453 343 aa12.69□□□□□ -0.38
CDCA3-206ENST00000536241 ZNF165P49910 485 aa12.69□□□□□ -0.38
CDCA3-206ENST00000536241 STX17P56962 302 aa12.69□□□□□ -0.38
CDCA3-206ENST00000536241 GTF2BQ00403 316 aa12.69□□□□□ -0.38
CDCA3-206ENST00000536241 TFDP1Q14186 410 aa12.69□□□□□ -0.38
CDCA3-206ENST00000536241 COBLL1Q53SF7 1204 aa12.69□□□□□ -0.38
CDCA3-206ENST00000536241 TAF2Q6P1X5 1199 aa12.69□□□□□ -0.38
CDCA3-206ENST00000536241 SERINC5Q86VE9 423 aa12.69□□□□□ -0.38
CDCA3-206ENST00000536241 NME8Q8N427 588 aa12.69□□□□□ -0.38
CDCA3-206ENST00000536241 WNT8BQ93098 351 aa12.69□□□□□ -0.38
CDCA3-206ENST00000536241 PAWRQ96IZ0 340 aaKnown RBP12.69□□□□□ -0.38
CDCA3-206ENST00000536241 FDXACB1Q9BRP7 624 aaPredicted RBP12.69□□□□□ -0.38
CDCA3-206ENST00000536241 TRPV6Q9H1D0 765 aa12.69□□□□□ -0.38
CDCA3-206ENST00000536241 ST6GALNAC4Q9H4F1 302 aa12.69□□□□□ -0.38
CDCA3-206ENST00000536241 CDHR5Q9HBB8 845 aa12.69□□□□□ -0.38
CDCA3-206ENST00000536241 NOD1Q9Y239 953 aa12.69□□□□□ -0.38
CDCA3-206ENST00000536241 DENND3A2RUS2 1198 aa12.68□□□□□ -0.38
CDCA3-206ENST00000536241 K7ERI5 159 aa12.68□□□□□ -0.38
CDCA3-206ENST00000536241 GPR32O75388 356 aa12.68□□□□□ -0.38
CDCA3-206ENST00000536241 CSDE1O75534 798 aaKnown RBP12.68□□□□□ -0.38
CDCA3-206ENST00000536241 PPP1R37O75864 691 aa12.68□□□□□ -0.38
CDCA3-206ENST00000536241 EN2P19622 333 aaPredicted RBP12.68□□□□□ -0.38
CDCA3-206ENST00000536241 GPC3P51654 580 aa12.68□□□□□ -0.38
CDCA3-206ENST00000536241 PMS1P54277 932 aaKnown RBP12.68□□□□□ -0.38
CDCA3-206ENST00000536241 PTENP60484 403 aa12.68□□□□□ -0.38
CDCA3-206ENST00000536241 STIM1Q13586 685 aa12.68□□□□□ -0.38
CDCA3-206ENST00000536241 KIZQ2M2Z5 673 aa12.68□□□□□ -0.38
CDCA3-206ENST00000536241 STXBP4Q6ZWJ1 553 aa12.68□□□□□ -0.38
CDCA3-206ENST00000536241 ANKLE1Q8NAG6 615 aa12.68□□□□□ -0.38
CDCA3-206ENST00000536241 SLC17A8Q8NDX2 589 aa12.68□□□□□ -0.38
CDCA3-206ENST00000536241 NELFBQ8WX92 580 aa12.68□□□□□ -0.38
CDCA3-206ENST00000536241 DHTKD1Q96HY7 919 aaPredicted RBP12.68□□□□□ -0.38
CDCA3-206ENST00000536241 MED15Q96RN5 788 aa12.68□□□□□ -0.38
CDCA3-206ENST00000536241 NAT10Q9H0A0 1025 aaKnown RBP12.68□□□□□ -0.38
CDCA3-206ENST00000536241 IKZF4Q9H2S9 585 aa12.68□□□□□ -0.38
CDCA3-206ENST00000536241 ADAMTS10Q9H324 1103 aa12.68□□□□□ -0.38
CDCA3-206ENST00000536241 SEMA6BQ9H3T3 888 aa12.68□□□□□ -0.38
CDCA3-206ENST00000536241 IFT122Q9HBG6 1241 aa12.68□□□□□ -0.38
CDCA3-206ENST00000536241 ARHGAP28Q9P2N2 729 aa12.68□□□□□ -0.38
CDCA3-206ENST00000536241 DACH1Q9UI36 760 aa12.68□□□□□ -0.38
CDCA3-206ENST00000536241 TBX20Q9UMR3 447 aa12.68□□□□□ -0.38
CDCA3-206ENST00000536241 GINS2Q9Y248 185 aa12.68□□□□□ -0.38
CDCA3-206ENST00000536241 RBAK-RBAKDNI3L0D1 243 aa12.67□□□□□ -0.38
CDCA3-206ENST00000536241 PSMA7O14818 248 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms