RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 SLC26A6Q9BXS9 759 aa14.61□□□□□ -0.07
TNFRSF1A-207ENST00000535958 C22orf23Q9BZE7 217 aa14.61□□□□□ -0.07
TNFRSF1A-207ENST00000535958 INO80BQ9C086 356 aaPredicted RBP14.61□□□□□ -0.07
TNFRSF1A-207ENST00000535958 ADAM7Q9H2U9 754 aa14.61□□□□□ -0.07
TNFRSF1A-207ENST00000535958 MFSD1Q9H3U5 465 aa14.61□□□□□ -0.07
TNFRSF1A-207ENST00000535958 RNF19AQ9NV58 838 aa14.61□□□□□ -0.07
TNFRSF1A-207ENST00000535958 FAM86C1Q9NVL1 165 aa14.61□□□□□ -0.07
TNFRSF1A-207ENST00000535958 ZDBF2Q9HCK1 2354 aa14.61□□□□□ -0.07
TNFRSF1A-207ENST00000535958 C2orf71A6NGG8 1288 aa14.6□□□□□ -0.07
TNFRSF1A-207ENST00000535958 NT5C1B-RDH14C9J2C7 533 aa14.6□□□□□ -0.07
TNFRSF1A-207ENST00000535958 MSH4O15457 936 aa14.6□□□□□ -0.07
TNFRSF1A-207ENST00000535958 GFRA3O60609 400 aa14.6□□□□□ -0.07
TNFRSF1A-207ENST00000535958 CXCL14O95715 111 aa14.6□□□□□ -0.07
TNFRSF1A-207ENST00000535958 FGFR4P22455 802 aa14.6□□□□□ -0.07
TNFRSF1A-207ENST00000535958 NUBP1P53384 320 aa14.6□□□□□ -0.07
TNFRSF1A-207ENST00000535958 BCAR1P56945 870 aa14.6□□□□□ -0.07
TNFRSF1A-207ENST00000535958 NLRP5P59047 1200 aa14.6□□□□□ -0.07
TNFRSF1A-207ENST00000535958 KCNC3Q14003 757 aa14.6□□□□□ -0.07
TNFRSF1A-207ENST00000535958 GIT2Q14161 759 aa14.6□□□□□ -0.07
TNFRSF1A-207ENST00000535958 RARS2Q5T160 578 aaKnown RBP14.6□□□□□ -0.07
TNFRSF1A-207ENST00000535958 GLB1LQ6UWU2 654 aa14.6□□□□□ -0.07
TNFRSF1A-207ENST00000535958 VPS52Q8N1B4 723 aa14.6□□□□□ -0.07
TNFRSF1A-207ENST00000535958 LINC01465Q8N7H1 131 aa14.6□□□□□ -0.07
TNFRSF1A-207ENST00000535958 MRPL43Q8N983 215 aaKnown RBP14.6□□□□□ -0.07
TNFRSF1A-207ENST00000535958 RNF26Q9BY78 433 aaPredicted RBP14.6□□□□□ -0.07
TNFRSF1A-207ENST00000535958 POMKQ9H5K3 350 aa14.6□□□□□ -0.07
TNFRSF1A-207ENST00000535958 CHST12Q9NRB3 414 aa14.6□□□□□ -0.07
TNFRSF1A-207ENST00000535958 DBR1Q9UK59 544 aaKnown RBP14.6□□□□□ -0.07
TNFRSF1A-207ENST00000535958 PIN4Q9Y237 131 aaKnown RBP14.6□□□□□ -0.07
TNFRSF1A-207ENST00000535958 C2CD4DB7Z1M9 353 aa14.59□□□□□ -0.07
TNFRSF1A-207ENST00000535958 ZNF862O60290 1169 aa14.59□□□□□ -0.07
TNFRSF1A-207ENST00000535958 CLASP2O75122 1294 aaKnown RBP14.59□□□□□ -0.07
TNFRSF1A-207ENST00000535958 CPA1P15085 419 aa14.59□□□□□ -0.07
TNFRSF1A-207ENST00000535958 RAB27AP51159 221 aa14.59□□□□□ -0.07
TNFRSF1A-207ENST00000535958 USP11P51784 963 aa14.59□□□□□ -0.07
TNFRSF1A-207ENST00000535958 XKR3Q5GH77 459 aa14.59□□□□□ -0.07
TNFRSF1A-207ENST00000535958 ATAT1Q5SQI0 421 aa14.59□□□□□ -0.07
TNFRSF1A-207ENST00000535958 TRIM22Q8IYM9 498 aa14.59□□□□□ -0.07
TNFRSF1A-207ENST00000535958 RDM1Q8NG50 284 aa14.59□□□□□ -0.07
TNFRSF1A-207ENST00000535958 JPH2Q9BR39 696 aaPredicted RBP14.59□□□□□ -0.07
TNFRSF1A-207ENST00000535958 UNC45AQ9H3U1 944 aa14.59□□□□□ -0.07
TNFRSF1A-207ENST00000535958 VPS54Q9P1Q0 977 aa14.59□□□□□ -0.07
TNFRSF1A-207ENST00000535958 INPP5FQ9Y2H2 1132 aa14.59□□□□□ -0.07
TNFRSF1A-207ENST00000535958 NID2Q14112 1375 aa14.59□□□□□ -0.07
TNFRSF1A-207ENST00000535958 CSDE1O75534 798 aaKnown RBP14.58□□□□□ -0.08
TNFRSF1A-207ENST00000535958 PSMA5P28066 241 aa14.58□□□□□ -0.08
TNFRSF1A-207ENST00000535958 PHKA2P46019 1235 aa14.58□□□□□ -0.08
TNFRSF1A-207ENST00000535958 UGCGQ16739 394 aa14.58□□□□□ -0.08
TNFRSF1A-207ENST00000535958 CENPQQ7L2Z9 268 aaPredicted RBP14.58□□□□□ -0.08
TNFRSF1A-207ENST00000535958 CATSPER4Q7RTX7 472 aa14.58□□□□□ -0.08
TNFRSF1A-207ENST00000535958 CABP7Q86V35 215 aa14.58□□□□□ -0.08
TNFRSF1A-207ENST00000535958 ZNF410Q86VK4 478 aa14.58□□□□□ -0.08
TNFRSF1A-207ENST00000535958 RHPN2Q8IUC4 686 aa14.58□□□□□ -0.08
TNFRSF1A-207ENST00000535958 PLCD3Q8N3E9 789 aa14.58□□□□□ -0.08
TNFRSF1A-207ENST00000535958 URGCPQ8TCY9 931 aa14.58□□□□□ -0.08
TNFRSF1A-207ENST00000535958 TBCKQ8TEA7 893 aa14.58□□□□□ -0.08
TNFRSF1A-207ENST00000535958 SLC5A5Q92911 643 aa14.58□□□□□ -0.08
TNFRSF1A-207ENST00000535958 LENG9Q96B70 501 aa14.58□□□□□ -0.08
TNFRSF1A-207ENST00000535958 NLRP4Q96MN2 994 aa14.58□□□□□ -0.08
TNFRSF1A-207ENST00000535958 GBP3Q9H0R5 595 aa14.58□□□□□ -0.08
TNFRSF1A-207ENST00000535958 STK39Q9UEW8 545 aa14.58□□□□□ -0.08
TNFRSF1A-207ENST00000535958 CDH22Q9UJ99 828 aa14.58□□□□□ -0.08
TNFRSF1A-207ENST00000535958 WDR81Q562E7 1941 aa14.57□□□□□ -0.08
TNFRSF1A-207ENST00000535958 A0A087WZ62 844 aa14.57□□□□□ -0.08
TNFRSF1A-207ENST00000535958 H0Y858 1186 aa14.57□□□□□ -0.08
TNFRSF1A-207ENST00000535958 POLGP54098 1239 aaPredicted RBP14.57□□□□□ -0.08
TNFRSF1A-207ENST00000535958 LONRF3Q496Y0 759 aa14.57□□□□□ -0.08
TNFRSF1A-207ENST00000535958 NOMO2Q5JPE7 1267 aa14.57□□□□□ -0.08
TNFRSF1A-207ENST00000535958 KIAA1841Q6NSI8 718 aa14.57□□□□□ -0.08
TNFRSF1A-207ENST00000535958 ZNF598Q86UK7 904 aaKnown RBP14.57□□□□□ -0.08
TNFRSF1A-207ENST00000535958 PPFIBP1Q86W92 1011 aa14.57□□□□□ -0.08
TNFRSF1A-207ENST00000535958 ACSF2Q96CM8 615 aaPredicted RBP14.57□□□□□ -0.08
TNFRSF1A-207ENST00000535958 PGBD4Q96DM1 585 aa14.57□□□□□ -0.08
TNFRSF1A-207ENST00000535958 FDXACB1Q9BRP7 624 aaPredicted RBP14.57□□□□□ -0.08
TNFRSF1A-207ENST00000535958 ZBP1Q9H171 429 aa14.57□□□□□ -0.08
TNFRSF1A-207ENST00000535958 SH3GLB2Q9NR46 395 aa14.57□□□□□ -0.08
TNFRSF1A-207ENST00000535958 SUCLA2Q9P2R7 463 aaPredicted RBP14.57□□□□□ -0.08
TNFRSF1A-207ENST00000535958 DDX11L8A8MPP1 907 aa14.56□□□□□ -0.08
TNFRSF1A-207ENST00000535958 CPLX1O14810 134 aa14.56□□□□□ -0.08
TNFRSF1A-207ENST00000535958 ADAMTS3O15072 1205 aa14.56□□□□□ -0.08
TNFRSF1A-207ENST00000535958 GALR2O43603 387 aaPredicted RBP14.56□□□□□ -0.08
TNFRSF1A-207ENST00000535958 BRD1O95696 1058 aa14.56□□□□□ -0.08
TNFRSF1A-207ENST00000535958 PDGFBP01127 241 aaPredicted RBP14.56□□□□□ -0.08
TNFRSF1A-207ENST00000535958 WEE2P0C1S8 567 aa14.56□□□□□ -0.08
TNFRSF1A-207ENST00000535958 IFNAR1P17181 557 aa14.56□□□□□ -0.08
TNFRSF1A-207ENST00000535958 RPS6KB1P23443 525 aa14.56□□□□□ -0.08
TNFRSF1A-207ENST00000535958 CCT2P78371 535 aaKnown RBP14.56□□□□□ -0.08
TNFRSF1A-207ENST00000535958 ELMSAN1Q6PJG2 1045 aa14.56□□□□□ -0.08
TNFRSF1A-207ENST00000535958 AUTS2Q8WXX7 1259 aa14.56□□□□□ -0.08
TNFRSF1A-207ENST00000535958 LPPQ93052 612 aa14.56□□□□□ -0.08
TNFRSF1A-207ENST00000535958 IGSF21Q96ID5 467 aa14.56□□□□□ -0.08
TNFRSF1A-207ENST00000535958 FAM193BQ96PV7 902 aaPredicted RBP14.56□□□□□ -0.08
TNFRSF1A-207ENST00000535958 EMILIN2Q9BXX0 1053 aa14.56□□□□□ -0.08
TNFRSF1A-207ENST00000535958 SFXN1Q9H9B4 322 aa14.56□□□□□ -0.08
TNFRSF1A-207ENST00000535958 FAM105AQ9NUU6 356 aa14.56□□□□□ -0.08
TNFRSF1A-207ENST00000535958 DKC1O60832 514 aaKnown RBP eCLIP14.55□□□□□ -0.08
TNFRSF1A-207ENST00000535958 ASGR2P07307 311 aa14.55□□□□□ -0.08
TNFRSF1A-207ENST00000535958 CTSAP10619 480 aa14.55□□□□□ -0.08
TNFRSF1A-207ENST00000535958 EPCAMP16422 314 aa14.55□□□□□ -0.08
TNFRSF1A-207ENST00000535958 SSRP1Q08945 709 aaKnown RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms