RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 ATF7P17544 494 aaPredicted RBP11.61□□□□□ -0.55
CSDE1-217ENST00000534699 SCP2P22307 547 aa11.61□□□□□ -0.55
CSDE1-217ENST00000534699 YWHABP31946 246 aaKnown RBP11.61□□□□□ -0.55
CSDE1-217ENST00000534699 C8orf76Q96K31 380 aa11.61□□□□□ -0.55
CSDE1-217ENST00000534699 MTRQ99707 1265 aa11.61□□□□□ -0.55
CSDE1-217ENST00000534699 RAB34Q9BZG1 259 aa11.61□□□□□ -0.55
CSDE1-217ENST00000534699 KCNH6Q9H252 994 aa11.61□□□□□ -0.55
CSDE1-217ENST00000534699 CDHR5Q9HBB8 845 aa11.61□□□□□ -0.55
CSDE1-217ENST00000534699 COL4A3BPQ9Y5P4 624 aa11.61□□□□□ -0.55
CSDE1-217ENST00000534699 TBKBP1A7MCY6 615 aa11.6□□□□□ -0.55
CSDE1-217ENST00000534699 ST18O60284 1047 aa11.6□□□□□ -0.55
CSDE1-217ENST00000534699 TMEM62Q0P6H9 643 aa11.6□□□□□ -0.55
CSDE1-217ENST00000534699 PDIA5Q14554 519 aa11.6□□□□□ -0.55
CSDE1-217ENST00000534699 MCPH1Q8NEM0 835 aa11.6□□□□□ -0.55
CSDE1-217ENST00000534699 CEP170P1Q96L14 293 aa11.6□□□□□ -0.55
CSDE1-217ENST00000534699 SCLT1Q96NL6 688 aa11.6□□□□□ -0.55
CSDE1-217ENST00000534699 LXNQ9BS40 222 aa11.6□□□□□ -0.55
CSDE1-217ENST00000534699 AGPAT5Q9NUQ2 364 aa11.6□□□□□ -0.55
CSDE1-217ENST00000534699 SPG21Q9NZD8 308 aa11.6□□□□□ -0.55
CSDE1-217ENST00000534699 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.6□□□□□ -0.55
CSDE1-217ENST00000534699 EML1O00423 815 aa11.6□□□□□ -0.55
CSDE1-217ENST00000534699 GRM6O15303 877 aa11.6□□□□□ -0.55
CSDE1-217ENST00000534699 ITGB1P05556 798 aa11.6□□□□□ -0.55
CSDE1-217ENST00000534699 HOXB8P17481 243 aaPredicted RBP11.6□□□□□ -0.55
CSDE1-217ENST00000534699 FBXO18Q8NFZ0 1043 aa11.6□□□□□ -0.55
CSDE1-217ENST00000534699 PRIMPOLQ96LW4 560 aa11.6□□□□□ -0.55
CSDE1-217ENST00000534699 NACC1Q96RE7 527 aa11.6□□□□□ -0.55
CSDE1-217ENST00000534699 EIF2AK1Q9BQI3 630 aaKnown RBP11.6□□□□□ -0.55
CSDE1-217ENST00000534699 TIPINQ9BVW5 301 aa11.6□□□□□ -0.55
CSDE1-217ENST00000534699 C2orf40Q9H1Z8 148 aa11.6□□□□□ -0.55
CSDE1-217ENST00000534699 TLR9Q9NR96 1032 aa11.6□□□□□ -0.55
CSDE1-217ENST00000534699 RNF19AQ9NV58 838 aa11.6□□□□□ -0.55
CSDE1-217ENST00000534699 ALADP13716 330 aa11.59□□□□□ -0.55
CSDE1-217ENST00000534699 PRPHP41219 470 aa11.59□□□□□ -0.55
CSDE1-217ENST00000534699 FAM187BQ17R55 369 aa11.59□□□□□ -0.55
CSDE1-217ENST00000534699 TMEM266Q2M3C6 531 aa11.59□□□□□ -0.55
CSDE1-217ENST00000534699 HAUS3Q68CZ6 603 aa11.59□□□□□ -0.55
CSDE1-217ENST00000534699 CYP26C1Q6V0L0 522 aa11.59□□□□□ -0.55
CSDE1-217ENST00000534699 PPP4R3CPQ6ZMV5 832 aa11.59□□□□□ -0.55
CSDE1-217ENST00000534699 APBB1IPQ7Z5R6 666 aaPredicted RBP11.59□□□□□ -0.55
CSDE1-217ENST00000534699 FERMT3Q86UX7 667 aa11.59□□□□□ -0.55
CSDE1-217ENST00000534699 FAM178BQ8IXR5 827 aa11.59□□□□□ -0.55
CSDE1-217ENST00000534699 KLHL23Q8NBE8 558 aa11.59□□□□□ -0.55
CSDE1-217ENST00000534699 URGCPQ8TCY9 931 aa11.59□□□□□ -0.55
CSDE1-217ENST00000534699 OXER1Q8TDS5 423 aa11.59□□□□□ -0.55
CSDE1-217ENST00000534699 RHOBTB2Q9BYZ6 727 aa11.59□□□□□ -0.55
CSDE1-217ENST00000534699 CD207Q9UJ71 328 aa11.59□□□□□ -0.55
CSDE1-217ENST00000534699 IRAK3Q9Y616 596 aa11.59□□□□□ -0.55
CSDE1-217ENST00000534699 PI4K2BG5E9Z4 385 aa11.59□□□□□ -0.55
CSDE1-217ENST00000534699 SLITRK3O94933 977 aa11.59□□□□□ -0.55
CSDE1-217ENST00000534699 NCLP19338 710 aaKnown RBP11.59□□□□□ -0.55
CSDE1-217ENST00000534699 FXR2P51116 673 aaKnown RBP eCLIP11.59□□□□□ -0.555e-7■□□□□ 10.4
CSDE1-217ENST00000534699 HYAL1Q12794 435 aa11.59□□□□□ -0.55
CSDE1-217ENST00000534699 EMC2Q15006 297 aa11.59□□□□□ -0.55
CSDE1-217ENST00000534699 SMAD2Q15796 467 aaKnown RBP11.59□□□□□ -0.55
CSDE1-217ENST00000534699 DUSP6Q16828 381 aa11.59□□□□□ -0.55
CSDE1-217ENST00000534699 PTCRAQ6ISU1 281 aaPredicted RBP11.59□□□□□ -0.55
CSDE1-217ENST00000534699 POTEDQ86YR6 584 aa11.59□□□□□ -0.55
CSDE1-217ENST00000534699 ADHFE1Q8IWW8 467 aa11.59□□□□□ -0.55
CSDE1-217ENST00000534699 LRRC71Q8N4P6 559 aa11.59□□□□□ -0.55
CSDE1-217ENST00000534699 FAM184AQ8NB25 1140 aa11.59□□□□□ -0.55
CSDE1-217ENST00000534699 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.59□□□□□ -0.55
CSDE1-217ENST00000534699 FGF18O76093 207 aa11.58□□□□□ -0.56
CSDE1-217ENST00000534699 U2AF2P26368 475 aaKnown RBP eCLIP11.58□□□□□ -0.562e-12■■■■□ 24.2
CSDE1-217ENST00000534699 ARL2P36404 184 aa11.58□□□□□ -0.56
CSDE1-217ENST00000534699 PTENP60484 403 aa11.58□□□□□ -0.56
CSDE1-217ENST00000534699 PPP2R5AQ15172 486 aa11.58□□□□□ -0.56
CSDE1-217ENST00000534699 XKR9Q5GH70 373 aa11.58□□□□□ -0.56
CSDE1-217ENST00000534699 NCAPH2Q6IBW4 605 aa11.58□□□□□ -0.56
CSDE1-217ENST00000534699 GLB1LQ6UWU2 654 aa11.58□□□□□ -0.56
CSDE1-217ENST00000534699 CATSPER4Q7RTX7 472 aa11.58□□□□□ -0.56
CSDE1-217ENST00000534699 PPFIBP1Q86W92 1011 aa11.58□□□□□ -0.56
CSDE1-217ENST00000534699 SLC39A11Q8N1S5 342 aa11.58□□□□□ -0.56
CSDE1-217ENST00000534699 POF1BQ8WVV4 589 aa11.58□□□□□ -0.56
CSDE1-217ENST00000534699 DYDC2Q96IM9 177 aa11.58□□□□□ -0.56
CSDE1-217ENST00000534699 TTC12Q9H892 705 aaPredicted RBP11.58□□□□□ -0.56
CSDE1-217ENST00000534699 DZANK1Q9NVP4 752 aa11.58□□□□□ -0.56
CSDE1-217ENST00000534699 MTUS1Q9ULD2 1270 aa11.58□□□□□ -0.56
CSDE1-217ENST00000534699 A0A087WZ62 844 aa11.58□□□□□ -0.56
CSDE1-217ENST00000534699 BTBD18B2RXH4 712 aa11.58□□□□□ -0.56
CSDE1-217ENST00000534699 GPR37L1O60883 481 aa11.58□□□□□ -0.56
CSDE1-217ENST00000534699 RPA1P27694 616 aa11.58□□□□□ -0.56
CSDE1-217ENST00000534699 SMC1AQ14683 1233 aaKnown RBP11.58□□□□□ -0.56
CSDE1-217ENST00000534699 ELMSAN1Q6PJG2 1045 aa11.58□□□□□ -0.56
CSDE1-217ENST00000534699 KCNT2Q6UVM3 1135 aa11.58□□□□□ -0.56
CSDE1-217ENST00000534699 CASP10Q92851 521 aa11.58□□□□□ -0.56
CSDE1-217ENST00000534699 MSLNLQ96KJ4 702 aa11.58□□□□□ -0.56
CSDE1-217ENST00000534699 FDXACB1Q9BRP7 624 aaPredicted RBP11.58□□□□□ -0.56
CSDE1-217ENST00000534699 FAM105AQ9NUU6 356 aa11.58□□□□□ -0.56
CSDE1-217ENST00000534699 MYO9BQ13459 2157 aa11.57□□□□□ -0.56
CSDE1-217ENST00000534699 OR52Z1P0C646 297 aa11.57□□□□□ -0.56
CSDE1-217ENST00000534699 LAMTOR4Q0VGL1 99 aa11.57□□□□□ -0.56
CSDE1-217ENST00000534699 C8orf34Q49A92 452 aa11.57□□□□□ -0.56
CSDE1-217ENST00000534699 SPOUT1Q5T280 376 aaKnown RBP11.57□□□□□ -0.56
CSDE1-217ENST00000534699 RHPN2Q8IUC4 686 aa11.57□□□□□ -0.56
CSDE1-217ENST00000534699 NECAB1Q8N987 351 aa11.57□□□□□ -0.56
CSDE1-217ENST00000534699 CCDC43Q96MW1 224 aaKnown RBP11.57□□□□□ -0.56
CSDE1-217ENST00000534699 IFT122Q9HBG6 1241 aa11.57□□□□□ -0.56
CSDE1-217ENST00000534699 TYW1Q9NV66 732 aaKnown RBP11.57□□□□□ -0.56
CSDE1-217ENST00000534699 PRRC2BQ5JSZ5 2229 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms