RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 RCAN3Q9UKA8 241 aa4.52□□□□□ -1.69
BRCA2-205ENST00000533776 B4E1Z4 1266 aa4.51□□□□□ -1.69
BRCA2-205ENST00000533776 FAM20BO75063 409 aa4.51□□□□□ -1.69
BRCA2-205ENST00000533776 TOX4O94842 621 aa4.51□□□□□ -1.69
BRCA2-205ENST00000533776 HNRNPLP14866 589 aaKnown RBP eCLIP4.51□□□□□ -1.69
BRCA2-205ENST00000533776 PTX3P26022 381 aaPredicted RBP4.51□□□□□ -1.69
BRCA2-205ENST00000533776 RANGAP1P46060 587 aaPredicted RBP4.51□□□□□ -1.69
BRCA2-205ENST00000533776 ZNF460Q14592 562 aa4.51□□□□□ -1.69
BRCA2-205ENST00000533776 ZNF174Q15697 407 aa4.51□□□□□ -1.69
BRCA2-205ENST00000533776 ZNF662Q6ZS27 426 aa4.51□□□□□ -1.69
BRCA2-205ENST00000533776 CLEC14AQ86T13 490 aa4.51□□□□□ -1.69
BRCA2-205ENST00000533776 GSPT2Q8IYD1 628 aaKnown RBP4.51□□□□□ -1.69
BRCA2-205ENST00000533776 MB21D1Q8N884 522 aa4.51□□□□□ -1.69
BRCA2-205ENST00000533776 PGBD4Q96DM1 585 aa4.51□□□□□ -1.69
BRCA2-205ENST00000533776 WDR92Q96MX6 357 aa4.51□□□□□ -1.69
BRCA2-205ENST00000533776 AGAP2Q99490 1192 aa4.51□□□□□ -1.69
BRCA2-205ENST00000533776 GPR87Q9BY21 358 aa4.51□□□□□ -1.69
BRCA2-205ENST00000533776 NRDE2Q9H7Z3 1164 aa4.51□□□□□ -1.69
BRCA2-205ENST00000533776 CABP5Q9NP86 173 aa4.51□□□□□ -1.69
BRCA2-205ENST00000533776 TNPO3Q9Y5L0 923 aaKnown RBP4.51□□□□□ -1.69
BRCA2-205ENST00000533776 TRAF5O00463 557 aa4.5□□□□□ -1.69
BRCA2-205ENST00000533776 RAMP2O60895 175 aa4.5□□□□□ -1.69
BRCA2-205ENST00000533776 PEX11BO96011 259 aa4.5□□□□□ -1.69
BRCA2-205ENST00000533776 ASLP04424 464 aa4.5□□□□□ -1.69
BRCA2-205ENST00000533776 VSIG10L2P0DP72 767 aa4.5□□□□□ -1.69
BRCA2-205ENST00000533776 SLC9A1P19634 815 aa4.5□□□□□ -1.69
BRCA2-205ENST00000533776 NANOS3P60323 173 aaKnown RBP4.5□□□□□ -1.69
BRCA2-205ENST00000533776 TOB2Q14106 344 aaPredicted RBP4.5□□□□□ -1.69
BRCA2-205ENST00000533776 MYBPC3Q14896 1274 aa4.5□□□□□ -1.69
BRCA2-205ENST00000533776 KRTAP15-1Q3LI76 137 aa4.5□□□□□ -1.69
BRCA2-205ENST00000533776 GAGE13Q4V321 117 aa4.5□□□□□ -1.69
BRCA2-205ENST00000533776 FKBP15Q5T1M5 1219 aa4.5□□□□□ -1.69
BRCA2-205ENST00000533776 SOGA3Q5TF21 947 aa4.5□□□□□ -1.69
BRCA2-205ENST00000533776 PIK3R6Q5UE93 754 aa4.5□□□□□ -1.69
BRCA2-205ENST00000533776 ELOA2Q8IYF1 753 aaPredicted RBP4.5□□□□□ -1.69
BRCA2-205ENST00000533776 RPGRQ92834 1020 aaKnown RBP4.5□□□□□ -1.69
BRCA2-205ENST00000533776 ARL8AQ96BM9 186 aa4.5□□□□□ -1.69
BRCA2-205ENST00000533776 C16orf92Q96LL3 132 aa4.5□□□□□ -1.69
BRCA2-205ENST00000533776 TTPALQ9BTX7 342 aa4.5□□□□□ -1.69
BRCA2-205ENST00000533776 GPRC5BQ9NZH0 403 aa4.5□□□□□ -1.69
BRCA2-205ENST00000533776 DMRT1Q9Y5R6 373 aa4.5□□□□□ -1.69
BRCA2-205ENST00000533776 DAPK3O43293 454 aa4.49□□□□□ -1.69
BRCA2-205ENST00000533776 DNAJC8O75937 253 aaPredicted RBP4.49□□□□□ -1.69
BRCA2-205ENST00000533776 APOL3O95236 402 aa4.49□□□□□ -1.69
BRCA2-205ENST00000533776 CYP17A1P05093 508 aa4.49□□□□□ -1.69
BRCA2-205ENST00000533776 BCAR1P56945 870 aa4.49□□□□□ -1.69
BRCA2-205ENST00000533776 FSTL1Q12841 308 aa4.49□□□□□ -1.69
BRCA2-205ENST00000533776 EPHA7Q15375 998 aa4.49□□□□□ -1.69
BRCA2-205ENST00000533776 FNDC3BQ53EP0 1204 aaKnown RBP4.49□□□□□ -1.69
BRCA2-205ENST00000533776 BMP8AQ7Z5Y6 402 aa4.49□□□□□ -1.69
BRCA2-205ENST00000533776 DNAJC10Q8IXB1 793 aa4.49□□□□□ -1.69
BRCA2-205ENST00000533776 ATXN2LQ8WWM7 1075 aaKnown RBP4.49□□□□□ -1.69
BRCA2-205ENST00000533776 ZG16BQ96DA0 208 aa4.49□□□□□ -1.69
BRCA2-205ENST00000533776 OSBPL2Q9H1P3 480 aa4.49□□□□□ -1.69
BRCA2-205ENST00000533776 XDHP47989 1333 aa4.48□□□□□ -1.69
BRCA2-205ENST00000533776 KLRG2A4D1S0 409 aaPredicted RBP4.48□□□□□ -1.69
BRCA2-205ENST00000533776 JUNP05412 331 aaKnown RBP4.48□□□□□ -1.69
BRCA2-205ENST00000533776 KRT4P19013 534 aa4.48□□□□□ -1.69
BRCA2-205ENST00000533776 PTGS2P35354 604 aa4.48□□□□□ -1.69
BRCA2-205ENST00000533776 RABGGTBP53611 331 aa4.48□□□□□ -1.69
BRCA2-205ENST00000533776 SMAD3P84022 425 aaKnown RBP4.48□□□□□ -1.69
BRCA2-205ENST00000533776 ADCY2Q08462 1091 aa4.48□□□□□ -1.69
BRCA2-205ENST00000533776 ESRP1Q6NXG1 681 aaKnown RBP4.48□□□□□ -1.69
BRCA2-205ENST00000533776 PCSK4Q6UW60 755 aa4.48□□□□□ -1.69
BRCA2-205ENST00000533776 Q6ZPA2 131 aa4.48□□□□□ -1.69
BRCA2-205ENST00000533776 ULK2Q8IYT8 1036 aa4.48□□□□□ -1.69
BRCA2-205ENST00000533776 C7orf31Q8N865 590 aa4.48□□□□□ -1.69
BRCA2-205ENST00000533776 ZNF512Q96ME7 567 aaPredicted RBP4.48□□□□□ -1.69
BRCA2-205ENST00000533776 DNAJC2Q99543 621 aaKnown RBP4.48□□□□□ -1.69
BRCA2-205ENST00000533776 MNTQ99583 582 aa4.48□□□□□ -1.69
BRCA2-205ENST00000533776 ELF4Q99607 663 aaPredicted RBP4.48□□□□□ -1.69
BRCA2-205ENST00000533776 PRRX2Q99811 253 aa4.48□□□□□ -1.69
BRCA2-205ENST00000533776 HAPLN2Q9GZV7 340 aa4.48□□□□□ -1.69
BRCA2-205ENST00000533776 C14orf93Q9H972 538 aaKnown RBP4.48□□□□□ -1.69
BRCA2-205ENST00000533776 B4GALT6Q9UBX8 382 aa4.48□□□□□ -1.69
BRCA2-205ENST00000533776 KRTAP29-1A8MX34 341 aaPredicted RBP4.47□□□□□ -1.69
BRCA2-205ENST00000533776 CBX4O00257 560 aa4.47□□□□□ -1.69
BRCA2-205ENST00000533776 MFAP3LO75121 409 aa4.47□□□□□ -1.69
BRCA2-205ENST00000533776 STC2O76061 302 aa4.47□□□□□ -1.69
BRCA2-205ENST00000533776 JMJD7P0C870 316 aa4.47□□□□□ -1.69
BRCA2-205ENST00000533776 SDSP20132 328 aa4.47□□□□□ -1.69
BRCA2-205ENST00000533776 KIR2DL3P43628 341 aa4.47□□□□□ -1.69
BRCA2-205ENST00000533776 NPEPPSP55786 919 aa4.47□□□□□ -1.69
BRCA2-205ENST00000533776 KRTAP10-7P60409 375 aaPredicted RBP4.47□□□□□ -1.69
BRCA2-205ENST00000533776 SQSTM1Q13501 440 aa4.47□□□□□ -1.69
BRCA2-205ENST00000533776 BMS1Q14692 1282 aaKnown RBP4.47□□□□□ -1.69
BRCA2-205ENST00000533776 RABL3Q5HYI8 236 aa4.47□□□□□ -1.69
BRCA2-205ENST00000533776 C1QL3Q5VWW1 255 aa4.47□□□□□ -1.69
BRCA2-205ENST00000533776 MFSD5Q6N075 450 aa4.47□□□□□ -1.69
BRCA2-205ENST00000533776 NME9Q86XW9 330 aa4.47□□□□□ -1.69
BRCA2-205ENST00000533776 RPUSD2Q8IZ73 545 aaKnown RBP4.47□□□□□ -1.69
BRCA2-205ENST00000533776 CMTM4Q8IZR5 234 aa4.47□□□□□ -1.69
BRCA2-205ENST00000533776 SLC25A43Q8WUT9 341 aaPredicted RBP4.47□□□□□ -1.69
BRCA2-205ENST00000533776 UIMC1Q96RL1 719 aa4.47□□□□□ -1.69
BRCA2-205ENST00000533776 MYL10Q9BUA6 226 aa4.47□□□□□ -1.69
BRCA2-205ENST00000533776 PITHD1Q9GZP4 211 aaPredicted RBP4.47□□□□□ -1.69
BRCA2-205ENST00000533776 POFUT1Q9H488 388 aa4.47□□□□□ -1.69
BRCA2-205ENST00000533776 MTG2Q9H4K7 406 aa4.47□□□□□ -1.69
BRCA2-205ENST00000533776 TOMM22Q9NS69 142 aa4.47□□□□□ -1.69
BRCA2-205ENST00000533776 SYNPO2Q9UMS6 1093 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms