RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 DACT1Q9NYF0 836 aa11.67□□□□□ -0.54
CAPN1-225ENST00000533704 PIN4Q9Y237 131 aaKnown RBP11.67□□□□□ -0.54
CAPN1-225ENST00000533704 COL4A3BPQ9Y5P4 624 aa11.67□□□□□ -0.54
CAPN1-225ENST00000533704 A0A087WWV3 80 aa11.66□□□□□ -0.54
CAPN1-225ENST00000533704 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.66□□□□□ -0.54
CAPN1-225ENST00000533704 HOXA2O43364 376 aa11.66□□□□□ -0.54
CAPN1-225ENST00000533704 DNAJB1P25685 340 aa11.66□□□□□ -0.54
CAPN1-225ENST00000533704 RFC5P40937 340 aa11.66□□□□□ -0.54
CAPN1-225ENST00000533704 FAM189BP81408 668 aa11.66□□□□□ -0.54
CAPN1-225ENST00000533704 HMGN5P82970 282 aaKnown RBP11.66□□□□□ -0.54
CAPN1-225ENST00000533704 SPIRE1Q08AE8 756 aa11.66□□□□□ -0.54
CAPN1-225ENST00000533704 ZNF174Q15697 407 aa11.66□□□□□ -0.54
CAPN1-225ENST00000533704 CLUL1Q15846 466 aa11.66□□□□□ -0.54
CAPN1-225ENST00000533704 FAM43BQ6ZT52 329 aaPredicted RBP11.66□□□□□ -0.54
CAPN1-225ENST00000533704 ZNF410Q86VK4 478 aa11.66□□□□□ -0.54
CAPN1-225ENST00000533704 COLGALT1Q8NBJ5 622 aa11.66□□□□□ -0.54
CAPN1-225ENST00000533704 SPPL3Q8TCT6 385 aa11.66□□□□□ -0.54
CAPN1-225ENST00000533704 MICAL1Q8TDZ2 1067 aa11.66□□□□□ -0.54
CAPN1-225ENST00000533704 POF1BQ8WVV4 589 aa11.66□□□□□ -0.54
CAPN1-225ENST00000533704 PSPC1Q8WXF1 523 aaKnown RBP11.66□□□□□ -0.54
CAPN1-225ENST00000533704 P2RX5Q93086 422 aa11.66□□□□□ -0.54
CAPN1-225ENST00000533704 PABPC5Q96DU9 382 aaKnown RBP11.66□□□□□ -0.54
CAPN1-225ENST00000533704 INO80BQ9C086 356 aaPredicted RBP11.66□□□□□ -0.54
CAPN1-225ENST00000533704 TMEM117Q9H0C3 514 aa11.66□□□□□ -0.54
CAPN1-225ENST00000533704 TMEM60Q9H2L4 133 aa11.66□□□□□ -0.54
CAPN1-225ENST00000533704 ELAC1Q9H777 363 aaKnown RBP11.66□□□□□ -0.54
CAPN1-225ENST00000533704 UPF2Q9HAU5 1272 aaKnown RBP11.66□□□□□ -0.54
CAPN1-225ENST00000533704 POTEMA6NI47 508 aa11.65□□□□□ -0.54
CAPN1-225ENST00000533704 SLITRK3O94933 977 aa11.65□□□□□ -0.54
CAPN1-225ENST00000533704 LAG3P18627 525 aa11.65□□□□□ -0.54
CAPN1-225ENST00000533704 GTF2F1P35269 517 aaKnown RBP eCLIP11.65□□□□□ -0.54
CAPN1-225ENST00000533704 IRS1P35568 1242 aa11.65□□□□□ -0.54
CAPN1-225ENST00000533704 LAMTOR4Q0VGL1 99 aa11.65□□□□□ -0.54
CAPN1-225ENST00000533704 HYAL1Q12794 435 aa11.65□□□□□ -0.54
CAPN1-225ENST00000533704 RABEP1Q15276 862 aa11.65□□□□□ -0.54
CAPN1-225ENST00000533704 LEXMQ3ZCV2 418 aa11.65□□□□□ -0.54
CAPN1-225ENST00000533704 NAALADL2Q58DX5 795 aa11.65□□□□□ -0.54
CAPN1-225ENST00000533704 PTCRAQ6ISU1 281 aaPredicted RBP11.65□□□□□ -0.54
CAPN1-225ENST00000533704 RBM23Q86U06 439 aaKnown RBP11.65□□□□□ -0.54
CAPN1-225ENST00000533704 EXOC8Q8IYI6 725 aa11.65□□□□□ -0.54
CAPN1-225ENST00000533704 LRRC43Q8N309 656 aa11.65□□□□□ -0.54
CAPN1-225ENST00000533704 HELQQ8TDG4 1101 aa11.65□□□□□ -0.54
CAPN1-225ENST00000533704 TCP11Q8WWU5 503 aa11.65□□□□□ -0.54
CAPN1-225ENST00000533704 PRPF31Q8WWY3 499 aaKnown RBP11.65□□□□□ -0.54
CAPN1-225ENST00000533704 LPPQ93052 612 aa11.65□□□□□ -0.54
CAPN1-225ENST00000533704 PPP2R3CQ969Q6 453 aa11.65□□□□□ -0.54
CAPN1-225ENST00000533704 CASD1Q96PB1 797 aa11.65□□□□□ -0.54
CAPN1-225ENST00000533704 MTRQ99707 1265 aa11.65□□□□□ -0.54
CAPN1-225ENST00000533704 DHX33Q9H6R0 707 aaKnown RBP11.65□□□□□ -0.54
CAPN1-225ENST00000533704 RNF19AQ9NV58 838 aa11.65□□□□□ -0.54
CAPN1-225ENST00000533704 PCDHGC5Q9Y5F6 944 aa11.65□□□□□ -0.54
CAPN1-225ENST00000533704 TDRD15B5MCY1 1934 aaKnown RBP11.64□□□□□ -0.55
CAPN1-225ENST00000533704 A0A0U1RQF3 1178 aa11.64□□□□□ -0.55
CAPN1-225ENST00000533704 LINC01565O15544 149 aa11.64□□□□□ -0.55
CAPN1-225ENST00000533704 ST18O60284 1047 aa11.64□□□□□ -0.55
CAPN1-225ENST00000533704 FGF18O76093 207 aa11.64□□□□□ -0.55
CAPN1-225ENST00000533704 IL9P15248 144 aa11.64□□□□□ -0.55
CAPN1-225ENST00000533704 PBX3P40426 434 aa11.64□□□□□ -0.55
CAPN1-225ENST00000533704 TECP42680 631 aa11.64□□□□□ -0.55
CAPN1-225ENST00000533704 RBM25P49756 843 aaKnown RBP11.64□□□□□ -0.55
CAPN1-225ENST00000533704 CAMK1Q14012 370 aa11.64□□□□□ -0.55
CAPN1-225ENST00000533704 CLLU1OSQ5K130 101 aa11.64□□□□□ -0.55
CAPN1-225ENST00000533704 TTC38Q5R3I4 469 aa11.64□□□□□ -0.55
CAPN1-225ENST00000533704 ADGRD2Q7Z7M1 963 aa11.64□□□□□ -0.55
CAPN1-225ENST00000533704 RNF149Q8NC42 400 aa11.64□□□□□ -0.55
CAPN1-225ENST00000533704 FBXO18Q8NFZ0 1043 aa11.64□□□□□ -0.55
CAPN1-225ENST00000533704 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.64□□□□□ -0.55
CAPN1-225ENST00000533704 NEK9Q8TD19 979 aa11.64□□□□□ -0.55
CAPN1-225ENST00000533704 PIGOQ8TEQ8 1089 aa11.64□□□□□ -0.55
CAPN1-225ENST00000533704 ZNF558Q96NG5 402 aa11.64□□□□□ -0.55
CAPN1-225ENST00000533704 MTMR9Q96QG7 549 aa11.64□□□□□ -0.55
CAPN1-225ENST00000533704 FOXP1Q9H334 677 aaPredicted RBP11.64□□□□□ -0.55
CAPN1-225ENST00000533704 CWH43Q9H720 699 aa11.64□□□□□ -0.55
CAPN1-225ENST00000533704 NOL7Q9UMY1 257 aaKnown RBP11.64□□□□□ -0.55
CAPN1-225ENST00000533704 INPP5FQ9Y2H2 1132 aa11.64□□□□□ -0.55
CAPN1-225ENST00000533704 PPME1Q9Y570 386 aa11.64□□□□□ -0.55
CAPN1-225ENST00000533704 EOMESO95936 686 aa11.63□□□□□ -0.55
CAPN1-225ENST00000533704 OR52Z1P0C646 297 aa11.63□□□□□ -0.55
CAPN1-225ENST00000533704 ATF7P17544 494 aaPredicted RBP11.63□□□□□ -0.55
CAPN1-225ENST00000533704 PHKA2P46019 1235 aa11.63□□□□□ -0.55
CAPN1-225ENST00000533704 NRIP1P48552 1158 aa11.63□□□□□ -0.55
CAPN1-225ENST00000533704 NDUFV1P49821 464 aa11.63□□□□□ -0.55
CAPN1-225ENST00000533704 NBR1Q14596 966 aa11.63□□□□□ -0.55
CAPN1-225ENST00000533704 PLPP4Q5VZY2 271 aa11.63□□□□□ -0.55
CAPN1-225ENST00000533704 KCNT2Q6UVM3 1135 aa11.63□□□□□ -0.55
CAPN1-225ENST00000533704 LRRC55Q6ZSA7 311 aa11.63□□□□□ -0.55
CAPN1-225ENST00000533704 MAEAQ7L5Y9 396 aa11.63□□□□□ -0.55
CAPN1-225ENST00000533704 ZNF598Q86UK7 904 aaKnown RBP11.63□□□□□ -0.55
CAPN1-225ENST00000533704 FERMT3Q86UX7 667 aa11.63□□□□□ -0.55
CAPN1-225ENST00000533704 NOSTRINQ8IVI9 506 aa11.63□□□□□ -0.55
CAPN1-225ENST00000533704 HSD17B14Q9BPX1 270 aa11.63□□□□□ -0.55
CAPN1-225ENST00000533704 MINDY3Q9H8M7 445 aa11.63□□□□□ -0.55
CAPN1-225ENST00000533704 IFT122Q9HBG6 1241 aa11.63□□□□□ -0.55
CAPN1-225ENST00000533704 XPNPEP1Q9NQW7 623 aa11.63□□□□□ -0.55
CAPN1-225ENST00000533704 ENTPD7Q9NQZ7 604 aa11.63□□□□□ -0.55
CAPN1-225ENST00000533704 TLR9Q9NR96 1032 aa11.63□□□□□ -0.55
CAPN1-225ENST00000533704 CHST12Q9NRB3 414 aa11.63□□□□□ -0.55
CAPN1-225ENST00000533704 ANKEF1Q9NU02 776 aa11.63□□□□□ -0.55
CAPN1-225ENST00000533704 FAM105AQ9NUU6 356 aa11.63□□□□□ -0.55
CAPN1-225ENST00000533704 ASAP2O43150 1006 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms