RNA–Protein interactions for RNA: ENST00000533686.5

PACSIN3-210, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 443 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-210ENST00000533686 AMPD3Q01432 767 aa18.22■□□□□ 0.51
PACSIN3-210ENST00000533686 MAPK7Q13164 816 aa18.22■□□□□ 0.51
PACSIN3-210ENST00000533686 CAPSQ13938 189 aa18.22■□□□□ 0.51
PACSIN3-210ENST00000533686 PPP2R5AQ15172 486 aa18.22■□□□□ 0.51
PACSIN3-210ENST00000533686 CNKSR3Q6P9H4 555 aa18.22■□□□□ 0.51
PACSIN3-210ENST00000533686 SRGAP1Q7Z6B7 1085 aa18.22■□□□□ 0.51
PACSIN3-210ENST00000533686 RNF149Q8NC42 400 aa18.22■□□□□ 0.51
PACSIN3-210ENST00000533686 TMEM40Q8WWA1 233 aa18.22■□□□□ 0.51
PACSIN3-210ENST00000533686 SEPT8Q92599 483 aa18.22■□□□□ 0.51
PACSIN3-210ENST00000533686 APBB2Q92870 758 aa18.22■□□□□ 0.51
PACSIN3-210ENST00000533686 IFT74Q96LB3 600 aa18.22■□□□□ 0.51
PACSIN3-210ENST00000533686 NLRP4Q96MN2 994 aa18.22■□□□□ 0.51
PACSIN3-210ENST00000533686 SCLT1Q96NL6 688 aa18.22■□□□□ 0.51
PACSIN3-210ENST00000533686 PPP1R16BQ96T49 567 aa18.22■□□□□ 0.51
PACSIN3-210ENST00000533686 OSBPL7Q9BZF2 842 aa18.22■□□□□ 0.51
PACSIN3-210ENST00000533686 GOLPH3LQ9H4A5 285 aa18.22■□□□□ 0.51
PACSIN3-210ENST00000533686 IFT122Q9HBG6 1241 aa18.22■□□□□ 0.51
PACSIN3-210ENST00000533686 TANC1Q9C0D5 1861 aa18.22■□□□□ 0.51
PACSIN3-210ENST00000533686 CEP290O15078 2479 aa18.21■□□□□ 0.51
PACSIN3-210ENST00000533686 MYMKA6NI61 221 aa18.21■□□□□ 0.51
PACSIN3-210ENST00000533686 GPR182O15218 404 aa18.21■□□□□ 0.51
PACSIN3-210ENST00000533686 RPS6KA5O75582 802 aa18.21■□□□□ 0.51
PACSIN3-210ENST00000533686 FGBP02675 491 aa18.21■□□□□ 0.51
PACSIN3-210ENST00000533686 SLFN14P0C7P3 912 aa18.21■□□□□ 0.51
PACSIN3-210ENST00000533686 ACRP10323 421 aa18.21■□□□□ 0.51
PACSIN3-210ENST00000533686 NAMPTP43490 491 aa18.21■□□□□ 0.51
PACSIN3-210ENST00000533686 PTENP60484 403 aa18.21■□□□□ 0.51
PACSIN3-210ENST00000533686 GIT2Q14161 759 aa18.21■□□□□ 0.51
PACSIN3-210ENST00000533686 TMEM240Q5SV17 173 aa18.21■□□□□ 0.51
PACSIN3-210ENST00000533686 PRPF38BQ5VTL8 546 aaKnown RBP18.21■□□□□ 0.51
PACSIN3-210ENST00000533686 DBF4BQ8NFT6 615 aa18.21■□□□□ 0.51
PACSIN3-210ENST00000533686 ZNF668Q96K58 619 aaPredicted RBP18.21■□□□□ 0.51
PACSIN3-210ENST00000533686 REEP2Q9BRK0 252 aa18.21■□□□□ 0.51
PACSIN3-210ENST00000533686 IFIH1Q9BYX4 1025 aaKnown RBP18.21■□□□□ 0.51
PACSIN3-210ENST00000533686 AGO3Q9H9G7 860 aaKnown RBP18.21■□□□□ 0.51
PACSIN3-210ENST00000533686 NOC2LQ9Y3T9 749 aaKnown RBP18.21■□□□□ 0.51
PACSIN3-210ENST00000533686 NPHP3-ACAD11A0A0J9YXS1 232 aa18.2■□□□□ 0.5
PACSIN3-210ENST00000533686 ACTN4O43707 911 aaKnown RBP18.2■□□□□ 0.5
PACSIN3-210ENST00000533686 KRT18P05783 430 aaKnown RBP18.2■□□□□ 0.5
PACSIN3-210ENST00000533686 ACTN1P12814 892 aa18.2■□□□□ 0.5
PACSIN3-210ENST00000533686 CD52P31358 61 aa18.2■□□□□ 0.5
PACSIN3-210ENST00000533686 PHKA2P46019 1235 aa18.2■□□□□ 0.5
PACSIN3-210ENST00000533686 ZNF131P52739 623 aa18.2■□□□□ 0.5
PACSIN3-210ENST00000533686 PCBP1Q15365 356 aaKnown RBP eCLIP18.2■□□□□ 0.5
PACSIN3-210ENST00000533686 CDCA2Q69YH5 1023 aaPredicted RBP18.2■□□□□ 0.5
PACSIN3-210ENST00000533686 CNNM4Q6P4Q7 775 aa18.2■□□□□ 0.5
PACSIN3-210ENST00000533686 ZNF365Q70YC5 407 aa18.2■□□□□ 0.5
PACSIN3-210ENST00000533686 FAM228AQ86W67 206 aa18.2■□□□□ 0.5
PACSIN3-210ENST00000533686 CEP57L1Q8IYX8 460 aa18.2■□□□□ 0.5
PACSIN3-210ENST00000533686 BSNDQ8WZ55 320 aa18.2■□□□□ 0.5
PACSIN3-210ENST00000533686 DDX12PQ92771 950 aa18.2■□□□□ 0.5
PACSIN3-210ENST00000533686 GBP4Q96PP9 640 aa18.2■□□□□ 0.5
PACSIN3-210ENST00000533686 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.2■□□□□ 0.55e-9■□□□□ 9.6
PACSIN3-210ENST00000533686 UBE2OQ9C0C9 1292 aaKnown RBP18.2■□□□□ 0.5
PACSIN3-210ENST00000533686 PRO3102Q9H379 93 aa18.2■□□□□ 0.5
PACSIN3-210ENST00000533686 POLD4Q9HCU8 107 aa18.2■□□□□ 0.5
PACSIN3-210ENST00000533686 ERVK-5Q9HDB9 667 aa18.2■□□□□ 0.5
PACSIN3-210ENST00000533686 SERTAD1Q9UHV2 236 aa18.2■□□□□ 0.5
PACSIN3-210ENST00000533686 PADI3Q9ULW8 664 aa18.2■□□□□ 0.5
PACSIN3-210ENST00000533686 BAIAP3O94812 1187 aa18.19■□□□□ 0.5
PACSIN3-210ENST00000533686 ZNF202O95125 648 aa18.19■□□□□ 0.5
PACSIN3-210ENST00000533686 PLS3P13797 630 aa18.19■□□□□ 0.5
PACSIN3-210ENST00000533686 RAD51AP2Q09MP3 1159 aa18.19■□□□□ 0.5
PACSIN3-210ENST00000533686 PAK2Q13177 524 aa18.19■□□□□ 0.5
PACSIN3-210ENST00000533686 DMP1Q13316 513 aaPredicted RBP18.19■□□□□ 0.5
PACSIN3-210ENST00000533686 LONRF3Q496Y0 759 aa18.19■□□□□ 0.5
PACSIN3-210ENST00000533686 ENGASEQ8NFI3 743 aa18.19■□□□□ 0.5
PACSIN3-210ENST00000533686 SPIRE2Q8WWL2 714 aa18.19■□□□□ 0.5
PACSIN3-210ENST00000533686 HERVK_113Q902F9 699 aa18.19■□□□□ 0.5
PACSIN3-210ENST00000533686 DNAJC19Q96DA6 116 aa18.19■□□□□ 0.5
PACSIN3-210ENST00000533686 C7orf25Q9BPX7 421 aa18.19■□□□□ 0.5
PACSIN3-210ENST00000533686 NTPCRQ9BSD7 190 aaKnown RBP18.19■□□□□ 0.5
PACSIN3-210ENST00000533686 FTHL17Q9BXU8 183 aa18.19■□□□□ 0.5
PACSIN3-210ENST00000533686 C2orf40Q9H1Z8 148 aa18.19■□□□□ 0.5
PACSIN3-210ENST00000533686 LARSQ9P2J5 1176 aaKnown RBP18.19■□□□□ 0.5
PACSIN3-210ENST00000533686 ST3GAL5Q9UNP4 418 aa18.19■□□□□ 0.5
PACSIN3-210ENST00000533686 ABHD14A-ACY1A0A1B0GW23 586 aa18.18■□□□□ 0.5
PACSIN3-210ENST00000533686 LRRIQ4A6NIV6 560 aa18.18■□□□□ 0.5
PACSIN3-210ENST00000533686 SFI1A8K8P3 1242 aa18.18■□□□□ 0.5
PACSIN3-210ENST00000533686 EFCAB14O75071 495 aa18.18■□□□□ 0.5
PACSIN3-210ENST00000533686 GADD45BO75293 160 aaPredicted RBP18.18■□□□□ 0.5
PACSIN3-210ENST00000533686 TBCAO75347 108 aaKnown RBP18.18■□□□□ 0.5
PACSIN3-210ENST00000533686 FAM13AO94988 1023 aa18.18■□□□□ 0.5
PACSIN3-210ENST00000533686 SFPQP23246 707 aaKnown RBP eCLIP18.18■□□□□ 0.5
PACSIN3-210ENST00000533686 NPTX2P47972 431 aa18.18■□□□□ 0.5
PACSIN3-210ENST00000533686 PEX3P56589 373 aa18.18■□□□□ 0.5
PACSIN3-210ENST00000533686 UBE2HP62256 183 aa18.18■□□□□ 0.5
PACSIN3-210ENST00000533686 CACNB1Q02641 598 aaPredicted RBP18.18■□□□□ 0.5
PACSIN3-210ENST00000533686 FAM160A1Q05DH4 1040 aa18.18■□□□□ 0.5
PACSIN3-210ENST00000533686 IKBKEQ14164 716 aa18.18■□□□□ 0.5
PACSIN3-210ENST00000533686 TPRNQ4KMQ1 711 aa18.18■□□□□ 0.5
PACSIN3-210ENST00000533686 ZBTB8OSQ8IWT0 167 aa18.18■□□□□ 0.5
PACSIN3-210ENST00000533686 FMR1NBQ8N0W7 255 aaPredicted RBP18.18■□□□□ 0.5
PACSIN3-210ENST00000533686 DEPTORQ8TB45 409 aa18.18■□□□□ 0.5
PACSIN3-210ENST00000533686 TRIM9Q9C026 710 aa18.18■□□□□ 0.5
PACSIN3-210ENST00000533686 PARVGQ9HBI0 331 aa18.18■□□□□ 0.5
PACSIN3-210ENST00000533686 PRPF40AO75400 957 aaKnown RBP18.17■□□□□ 0.5
PACSIN3-210ENST00000533686 MYL1P05976 194 aa18.17■□□□□ 0.5
PACSIN3-210ENST00000533686 EFNA5P52803 228 aa18.17■□□□□ 0.5
PACSIN3-210ENST00000533686 SMTNP53814 917 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms