RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 TRPM1Q7Z4N2 1603 aa7.48□□□□□ -1.21
CTNND1-236ENST00000533667 TMED1Q13445 227 aa7.48□□□□□ -1.21
CTNND1-236ENST00000533667 MFSD4BQ5TF39 518 aa7.48□□□□□ -1.21
CTNND1-236ENST00000533667 TRIM67Q6ZTA4 783 aa7.48□□□□□ -1.21
CTNND1-236ENST00000533667 ZBTB33Q86T24 672 aa7.48□□□□□ -1.21
CTNND1-236ENST00000533667 TBC1D1Q86TI0 1168 aaPredicted RBP7.48□□□□□ -1.21
CTNND1-236ENST00000533667 FBXL13Q8NEE6 735 aa7.48□□□□□ -1.21
CTNND1-236ENST00000533667 RFFLQ8WZ73 363 aa7.48□□□□□ -1.21
CTNND1-236ENST00000533667 ATP6V1G3Q96LB4 118 aa7.48□□□□□ -1.21
CTNND1-236ENST00000533667 TIPINQ9BVW5 301 aa7.48□□□□□ -1.21
CTNND1-236ENST00000533667 DBNDD1Q9H9R9 158 aa7.48□□□□□ -1.21
CTNND1-236ENST00000533667 PNMA3Q9UL41 463 aa7.48□□□□□ -1.21
CTNND1-236ENST00000533667 TARBP1Q13395 1621 aaKnown RBP7.48□□□□□ -1.21
CTNND1-236ENST00000533667 ITIH6Q6UXX5 1313 aa7.48□□□□□ -1.21
CTNND1-236ENST00000533667 ABCC3O15438 1527 aa7.48□□□□□ -1.21
CTNND1-236ENST00000533667 NVLO15381 856 aaKnown RBP7.48□□□□□ -1.21
CTNND1-236ENST00000533667 ASAP2O43150 1006 aa7.48□□□□□ -1.21
CTNND1-236ENST00000533667 P4HBP07237 508 aaKnown RBP7.48□□□□□ -1.21
CTNND1-236ENST00000533667 MTMR1Q13613 665 aa7.48□□□□□ -1.21
CTNND1-236ENST00000533667 PDIA5Q14554 519 aa7.48□□□□□ -1.21
CTNND1-236ENST00000533667 MAPK6Q16659 721 aa7.48□□□□□ -1.21
CTNND1-236ENST00000533667 ZNF564Q8TBZ8 553 aaPredicted RBP7.48□□□□□ -1.21
CTNND1-236ENST00000533667 MASTLQ96GX5 879 aa7.48□□□□□ -1.21
CTNND1-236ENST00000533667 MAGEB5Q9BZ81 275 aa7.48□□□□□ -1.21
CTNND1-236ENST00000533667 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.48□□□□□ -1.21
CTNND1-236ENST00000533667 LIMA1Q9UHB6 759 aaKnown RBP7.48□□□□□ -1.21
CTNND1-236ENST00000533667 UBN2Q6ZU65 1347 aa7.47□□□□□ -1.21
CTNND1-236ENST00000533667 CLDN3O15551 220 aa7.47□□□□□ -1.21
CTNND1-236ENST00000533667 SMARCA1P28370 1054 aa7.47□□□□□ -1.21
CTNND1-236ENST00000533667 PMLP29590 882 aa7.47□□□□□ -1.21
CTNND1-236ENST00000533667 IREB2P48200 963 aaKnown RBP7.47□□□□□ -1.21
CTNND1-236ENST00000533667 ARID5BQ14865 1188 aa7.47□□□□□ -1.21
CTNND1-236ENST00000533667 KYAT1Q16773 422 aa7.47□□□□□ -1.21
CTNND1-236ENST00000533667 SH3RF3Q8TEJ3 882 aaPredicted RBP7.47□□□□□ -1.21
CTNND1-236ENST00000533667 DCP1AQ9NPI6 582 aaPredicted RBP7.47□□□□□ -1.21
CTNND1-236ENST00000533667 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.47□□□□□ -1.21
CTNND1-236ENST00000533667 ZFP69BQ9UJL9 534 aa7.47□□□□□ -1.21
CTNND1-236ENST00000533667 GOLGA8IPA6NC78 632 aa7.47□□□□□ -1.21
CTNND1-236ENST00000533667 TRIM49BA6NDI0 452 aa7.47□□□□□ -1.21
CTNND1-236ENST00000533667 GOLGA8JA6NMD2 632 aa7.47□□□□□ -1.21
CTNND1-236ENST00000533667 SLC16A3O15427 465 aaKnown RBP7.47□□□□□ -1.21
CTNND1-236ENST00000533667 HAUS5O94927 633 aa7.47□□□□□ -1.21
CTNND1-236ENST00000533667 ADRA2BP18089 450 aa7.47□□□□□ -1.21
CTNND1-236ENST00000533667 EIF2AK2P19525 551 aaKnown RBP7.47□□□□□ -1.21
CTNND1-236ENST00000533667 VAMP7P51809 220 aa7.47□□□□□ -1.21
CTNND1-236ENST00000533667 OCRLQ01968 901 aa7.47□□□□□ -1.21
CTNND1-236ENST00000533667 TRIM28Q13263 835 aaKnown RBP7.47□□□□□ -1.21
CTNND1-236ENST00000533667 PDXDC1Q6P996 788 aa7.47□□□□□ -1.21
CTNND1-236ENST00000533667 RHOT1Q8IXI2 618 aa7.47□□□□□ -1.21
CTNND1-236ENST00000533667 COG1Q8WTW3 980 aa7.47□□□□□ -1.21
CTNND1-236ENST00000533667 DACT3Q96B18 629 aaPredicted RBP7.47□□□□□ -1.21
CTNND1-236ENST00000533667 SNF8Q96H20 258 aa7.47□□□□□ -1.21
CTNND1-236ENST00000533667 PPCSQ9HAB8 311 aa7.47□□□□□ -1.21
CTNND1-236ENST00000533667 XAB2Q9HCS7 855 aaKnown RBP7.47□□□□□ -1.21
CTNND1-236ENST00000533667 PPARGC1AQ9UBK2 798 aaKnown RBP7.47□□□□□ -1.21
CTNND1-236ENST00000533667 SLC8A2Q9UPR5 921 aa7.47□□□□□ -1.21
CTNND1-236ENST00000533667 TTC26A0AVF1 554 aa7.47□□□□□ -1.21
CTNND1-236ENST00000533667 POTEMA6NI47 508 aa7.47□□□□□ -1.21
CTNND1-236ENST00000533667 USP17L5A8MUK1 530 aa7.47□□□□□ -1.21
CTNND1-236ENST00000533667 HOXA13P31271 388 aaPredicted RBP7.47□□□□□ -1.21
CTNND1-236ENST00000533667 SLC1A1P43005 524 aa7.47□□□□□ -1.21
CTNND1-236ENST00000533667 PHKA2P46019 1235 aa7.47□□□□□ -1.21
CTNND1-236ENST00000533667 GFPT1Q06210 699 aaPredicted RBP7.47□□□□□ -1.21
CTNND1-236ENST00000533667 STXBP2Q15833 593 aa7.47□□□□□ -1.21
CTNND1-236ENST00000533667 TMTC4Q5T4D3 741 aa7.47□□□□□ -1.21
CTNND1-236ENST00000533667 PODNQ7Z5L7 613 aa7.47□□□□□ -1.21
CTNND1-236ENST00000533667 MYLK4Q86YV6 388 aaPredicted RBP7.47□□□□□ -1.21
CTNND1-236ENST00000533667 ARHGAP18Q8N392 663 aa7.47□□□□□ -1.21
CTNND1-236ENST00000533667 DCLK2Q8N568 766 aa7.47□□□□□ -1.21
CTNND1-236ENST00000533667 TRIML2Q8N7C3 387 aa7.47□□□□□ -1.21
CTNND1-236ENST00000533667 ATP11CQ8NB49 1132 aa7.47□□□□□ -1.21
CTNND1-236ENST00000533667 FGD4Q96M96 766 aa7.47□□□□□ -1.21
CTNND1-236ENST00000533667 CCSER1Q9C0I3 900 aa7.47□□□□□ -1.21
CTNND1-236ENST00000533667 INTS2Q9H0H0 1204 aaKnown RBP7.47□□□□□ -1.21
CTNND1-236ENST00000533667 ZWILCHQ9H900 591 aa7.47□□□□□ -1.21
CTNND1-236ENST00000533667 LRFN2Q9ULH4 789 aa7.47□□□□□ -1.21
CTNND1-236ENST00000533667 MROH7-TTC4A0A0A0MT08 1334 aa7.47□□□□□ -1.21
CTNND1-236ENST00000533667 ARAP3Q8WWN8 1544 aa7.47□□□□□ -1.21
CTNND1-236ENST00000533667 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.47□□□□□ -1.21
CTNND1-236ENST00000533667 PDXKO00764 312 aa7.47□□□□□ -1.21
CTNND1-236ENST00000533667 MAGOHP61326 146 aaKnown RBP7.47□□□□□ -1.21
CTNND1-236ENST00000533667 IL1RL1Q01638 556 aa7.47□□□□□ -1.21
CTNND1-236ENST00000533667 ZNF699Q32M78 642 aa7.47□□□□□ -1.21
CTNND1-236ENST00000533667 GRAMD1BQ3KR37 738 aa7.47□□□□□ -1.21
CTNND1-236ENST00000533667 EPHA10Q5JZY3 1008 aa7.47□□□□□ -1.21
CTNND1-236ENST00000533667 NLRP14Q86W24 1093 aa7.47□□□□□ -1.21
CTNND1-236ENST00000533667 APLFQ8IW19 511 aaPredicted RBP7.47□□□□□ -1.21
CTNND1-236ENST00000533667 CXorf38Q8TB03 319 aa7.47□□□□□ -1.21
CTNND1-236ENST00000533667 TTC17Q96AE7 1141 aa7.47□□□□□ -1.21
CTNND1-236ENST00000533667 CHMP6Q96FZ7 201 aa7.47□□□□□ -1.21
CTNND1-236ENST00000533667 LRRC37BQ96QE4 947 aa7.47□□□□□ -1.21
CTNND1-236ENST00000533667 ISCA1Q9BUE6 129 aa7.47□□□□□ -1.21
CTNND1-236ENST00000533667 NGRNQ9NPE2 291 aaKnown RBP7.47□□□□□ -1.21
CTNND1-236ENST00000533667 HOXC10Q9NYD6 342 aa7.47□□□□□ -1.21
CTNND1-236ENST00000533667 SUGT1Q9Y2Z0 365 aa7.47□□□□□ -1.21
CTNND1-236ENST00000533667 A0A0G2JND7 137 aa7.46□□□□□ -1.21
CTNND1-236ENST00000533667 SSU72P8A0A1W2PR75 194 aa7.46□□□□□ -1.21
CTNND1-236ENST00000533667 WDR91A4D1P6 747 aa7.46□□□□□ -1.21
CTNND1-236ENST00000533667 QARSP47897 775 aaKnown RBP7.46□□□□□ -1.21
CTNND1-236ENST00000533667 EPHB1P54762 984 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms