RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 VCAM1P19320 739 aa17.99■□□□□ 0.47
CTSB-228ENST00000533455 SCTRP47872 440 aa17.99■□□□□ 0.47
CTSB-228ENST00000533455 PMS2P54278 862 aa17.99■□□□□ 0.47
CTSB-228ENST00000533455 KIF22Q14807 665 aa17.99■□□□□ 0.47
CTSB-228ENST00000533455 TCEAL1Q15170 157 aa17.99■□□□□ 0.47
CTSB-228ENST00000533455 PPP2R5AQ15172 486 aa17.99■□□□□ 0.47
CTSB-228ENST00000533455 VPS72Q15906 364 aa17.99■□□□□ 0.47
CTSB-228ENST00000533455 KIAA1755Q5JYT7 1200 aa17.99■□□□□ 0.47
CTSB-228ENST00000533455 ZDHHC24Q6UX98 284 aa17.99■□□□□ 0.47
CTSB-228ENST00000533455 CPLX4Q7Z7G2 160 aa17.99■□□□□ 0.47
CTSB-228ENST00000533455 JAMLQ86YT9 394 aa17.99■□□□□ 0.47
CTSB-228ENST00000533455 CCDC50Q8IVM0 306 aa17.99■□□□□ 0.47
CTSB-228ENST00000533455 FUKQ8N0W3 1084 aa17.99■□□□□ 0.47
CTSB-228ENST00000533455 TRIM31Q9BZY9 425 aa17.99■□□□□ 0.47
CTSB-228ENST00000533455 TUFT1Q9NNX1 390 aa17.99■□□□□ 0.47
CTSB-228ENST00000533455 DMAC2Q9NW81 257 aa17.99■□□□□ 0.47
CTSB-228ENST00000533455 RASAL2Q9UJF2 1139 aa17.99■□□□□ 0.47
CTSB-228ENST00000533455 LOXHD1Q8IVV2 1947 aa17.99■□□□□ 0.47
CTSB-228ENST00000533455 EML1O00423 815 aa17.99■□□□□ 0.47
CTSB-228ENST00000533455 KIAA0391O15091 583 aaKnown RBP17.99■□□□□ 0.47
CTSB-228ENST00000533455 DNAJC8O75937 253 aaPredicted RBP17.99■□□□□ 0.47
CTSB-228ENST00000533455 ADRA2BP18089 450 aa17.99■□□□□ 0.47
CTSB-228ENST00000533455 RFX1P22670 979 aa17.99■□□□□ 0.47
CTSB-228ENST00000533455 GBP1P32455 592 aa17.99■□□□□ 0.47
CTSB-228ENST00000533455 MAP2K2P36507 400 aa17.99■□□□□ 0.47
CTSB-228ENST00000533455 MMP13P45452 471 aa17.99■□□□□ 0.47
CTSB-228ENST00000533455 MAPK7Q13164 816 aa17.99■□□□□ 0.47
CTSB-228ENST00000533455 XRCC4Q13426 336 aa17.99■□□□□ 0.47
CTSB-228ENST00000533455 PREPLQ4J6C6 727 aaPredicted RBP17.99■□□□□ 0.47
CTSB-228ENST00000533455 CYB5D1Q6P9G0 228 aa17.99■□□□□ 0.47
CTSB-228ENST00000533455 HHIPL2Q6UWX4 724 aa17.99■□□□□ 0.47
CTSB-228ENST00000533455 FAM196AQ6ZSG2 479 aa17.99■□□□□ 0.47
CTSB-228ENST00000533455 FBXO11Q86XK2 927 aa17.99■□□□□ 0.47
CTSB-228ENST00000533455 MAGEC3Q8TD91 643 aa17.99■□□□□ 0.47
CTSB-228ENST00000533455 SGSM3Q96HU1 749 aa17.99■□□□□ 0.47
CTSB-228ENST00000533455 ZNF317Q96PQ6 595 aaPredicted RBP17.99■□□□□ 0.47
CTSB-228ENST00000533455 CD248Q9HCU0 757 aa17.99■□□□□ 0.47
CTSB-228ENST00000533455 APEX2Q9UBZ4 518 aa17.99■□□□□ 0.47
CTSB-228ENST00000533455 PNMA2Q9UL42 364 aa17.99■□□□□ 0.47
CTSB-228ENST00000533455 SYNGAP1Q96PV0 1343 aa17.99■□□□□ 0.47
CTSB-228ENST00000533455 CCDC169A6NNP5 214 aa17.98■□□□□ 0.47
CTSB-228ENST00000533455 PHF20L1A8MW92 1017 aa17.98■□□□□ 0.47
CTSB-228ENST00000533455 PHF2O75151 1096 aa17.98■□□□□ 0.47
CTSB-228ENST00000533455 ABCB4P21439 1286 aa17.98■□□□□ 0.47
CTSB-228ENST00000533455 TNFAIP3P21580 790 aa17.98■□□□□ 0.47
CTSB-228ENST00000533455 POLD1P28340 1107 aa17.98■□□□□ 0.47
CTSB-228ENST00000533455 NMT1P30419 496 aaKnown RBP17.98■□□□□ 0.47
CTSB-228ENST00000533455 PTGIRP43119 386 aa17.98■□□□□ 0.47
CTSB-228ENST00000533455 PDE4CQ08493 712 aa17.98■□□□□ 0.47
CTSB-228ENST00000533455 PRPF4BQ13523 1007 aaKnown RBP17.98■□□□□ 0.47
CTSB-228ENST00000533455 C11orf63Q6NUN7 778 aa17.98■□□□□ 0.47
CTSB-228ENST00000533455 C1orf186Q6ZWK4 172 aa17.98■□□□□ 0.47
CTSB-228ENST00000533455 CROCCP2Q86T23 111 aa17.98■□□□□ 0.47
CTSB-228ENST00000533455 RHOT2Q8IXI1 618 aa17.98■□□□□ 0.47
CTSB-228ENST00000533455 FIZ1Q96SL8 496 aa17.98■□□□□ 0.47
CTSB-228ENST00000533455 SEL1LQ9UBV2 794 aa17.98■□□□□ 0.47
CTSB-228ENST00000533455 COG5Q9UP83 839 aa17.98■□□□□ 0.47
CTSB-228ENST00000533455 THSD7AQ9UPZ6 1657 aa17.98■□□□□ 0.47
CTSB-228ENST00000533455 MYH11P35749 1972 aa17.98■□□□□ 0.47
CTSB-228ENST00000533455 MIF4GDA9UHW6 222 aaKnown RBP17.98■□□□□ 0.47
CTSB-228ENST00000533455 BACH1O14867 736 aa17.98■□□□□ 0.47
CTSB-228ENST00000533455 SHBGP04278 402 aa17.98■□□□□ 0.47
CTSB-228ENST00000533455 SERPINB2P05120 415 aa17.98■□□□□ 0.47
CTSB-228ENST00000533455 SNCBQ16143 134 aa17.98■□□□□ 0.47
CTSB-228ENST00000533455 CBWD6Q4V339 395 aa17.98■□□□□ 0.47
CTSB-228ENST00000533455 CBWD3Q5JTY5 395 aa17.98■□□□□ 0.47
CTSB-228ENST00000533455 CBWD5Q5RIA9 395 aa17.98■□□□□ 0.47
CTSB-228ENST00000533455 DENND2CQ68D51 928 aa17.98■□□□□ 0.47
CTSB-228ENST00000533455 PARP9Q8IXQ6 854 aa17.98■□□□□ 0.47
CTSB-228ENST00000533455 MYCT1Q8N699 235 aa17.98■□□□□ 0.47
CTSB-228ENST00000533455 MDM1Q8TC05 714 aa17.98■□□□□ 0.47
CTSB-228ENST00000533455 ALG3Q92685 438 aa17.98■□□□□ 0.47
CTSB-228ENST00000533455 RNF25Q96BH1 459 aaPredicted RBP17.98■□□□□ 0.47
CTSB-228ENST00000533455 HSD17B14Q9BPX1 270 aa17.98■□□□□ 0.47
CTSB-228ENST00000533455 JPH2Q9BR39 696 aaPredicted RBP17.98■□□□□ 0.47
CTSB-228ENST00000533455 TMEM109Q9BVC6 243 aa17.98■□□□□ 0.47
CTSB-228ENST00000533455 THAP2Q9H0W7 228 aa17.98■□□□□ 0.47
CTSB-228ENST00000533455 CNOT7Q9UIV1 285 aaKnown RBP17.98■□□□□ 0.47
CTSB-228ENST00000533455 PFASO15067 1338 aa17.97■□□□□ 0.47
CTSB-228ENST00000533455 CHRNA3P32297 505 aa17.97■□□□□ 0.47
CTSB-228ENST00000533455 RDXP35241 583 aaKnown RBP17.97■□□□□ 0.47
CTSB-228ENST00000533455 ZNF131P52739 623 aa17.97■□□□□ 0.47
CTSB-228ENST00000533455 MYL7Q01449 175 aa17.97■□□□□ 0.47
CTSB-228ENST00000533455 PPARDQ03181 441 aa17.97■□□□□ 0.47
CTSB-228ENST00000533455 KCTD19Q17RG1 926 aaPredicted RBP17.97■□□□□ 0.47
CTSB-228ENST00000533455 WLSQ5T9L3 541 aa17.97■□□□□ 0.47
CTSB-228ENST00000533455 APOBEC3HQ6NTF7 200 aaKnown RBP17.97■□□□□ 0.47
CTSB-228ENST00000533455 COL23A1Q86Y22 540 aaPredicted RBP17.97■□□□□ 0.47
CTSB-228ENST00000533455 ATXN2LQ8WWM7 1075 aaKnown RBP17.97■□□□□ 0.47
CTSB-228ENST00000533455 HVCN1Q96D96 273 aa17.97■□□□□ 0.47
CTSB-228ENST00000533455 IKZF4Q9H2S9 585 aa17.97■□□□□ 0.47
CTSB-228ENST00000533455 ADAM7Q9H2U9 754 aa17.97■□□□□ 0.47
CTSB-228ENST00000533455 PARVGQ9HBI0 331 aa17.97■□□□□ 0.47
CTSB-228ENST00000533455 HAUS2Q9NVX0 235 aa17.97■□□□□ 0.47
CTSB-228ENST00000533455 TAS2R14Q9NYV8 317 aa17.97■□□□□ 0.47
CTSB-228ENST00000533455 GRHL1Q9NZI5 618 aa17.97■□□□□ 0.47
CTSB-228ENST00000533455 RGL1Q9NZL6 768 aa17.97■□□□□ 0.47
CTSB-228ENST00000533455 PCYOX1Q9UHG3 505 aa17.97■□□□□ 0.47
CTSB-228ENST00000533455 IGLV3-22A0A075B6J6 115 aa17.96■□□□□ 0.47
CTSB-228ENST00000533455 SFI1A8K8P3 1242 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms