RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 GJB2P29033 226 aa18.56■□□□□ 0.56
PKP3-209ENST00000533069 PAN2Q504Q3 1202 aaKnown RBP18.56■□□□□ 0.56
PKP3-209ENST00000533069 P2RX5Q93086 422 aa18.56■□□□□ 0.56
PKP3-209ENST00000533069 TMEM143Q96AN5 459 aa18.56■□□□□ 0.56
PKP3-209ENST00000533069 ASB2Q96Q27 587 aa18.56■□□□□ 0.56
PKP3-209ENST00000533069 POLR3CQ9BUI4 534 aaPredicted RBP18.56■□□□□ 0.56
PKP3-209ENST00000533069 WDR81Q562E7 1941 aa18.56■□□□□ 0.56
PKP3-209ENST00000533069 A0A0U1RQF3 1178 aa18.55■□□□□ 0.56
PKP3-209ENST00000533069 TBKBP1A7MCY6 615 aa18.55■□□□□ 0.56
PKP3-209ENST00000533069 FGFR4P22455 802 aa18.55■□□□□ 0.56
PKP3-209ENST00000533069 TECP42680 631 aa18.55■□□□□ 0.56
PKP3-209ENST00000533069 GATMP50440 423 aa18.55■□□□□ 0.56
PKP3-209ENST00000533069 LAMTOR4Q0VGL1 99 aa18.55■□□□□ 0.56
PKP3-209ENST00000533069 MXD4Q14582 209 aaPredicted RBP18.55■□□□□ 0.56
PKP3-209ENST00000533069 HAUS3Q68CZ6 603 aa18.55■□□□□ 0.56
PKP3-209ENST00000533069 SRGAP1Q7Z6B7 1085 aa18.55■□□□□ 0.56
PKP3-209ENST00000533069 ECHDC2Q86YB7 292 aa18.55■□□□□ 0.56
PKP3-209ENST00000533069 KSR1Q8IVT5 923 aa18.55■□□□□ 0.56
PKP3-209ENST00000533069 HLA-CQ95604 372 aa18.55■□□□□ 0.56
PKP3-209ENST00000533069 TRAIPQ9BWF2 469 aa18.55■□□□□ 0.56
PKP3-209ENST00000533069 TMEM117Q9H0C3 514 aa18.55■□□□□ 0.56
PKP3-209ENST00000533069 IFT122Q9HBG6 1241 aa18.55■□□□□ 0.56
PKP3-209ENST00000533069 AAASQ9NRG9 546 aa18.55■□□□□ 0.56
PKP3-209ENST00000533069 SMC3Q9UQE7 1217 aa18.55■□□□□ 0.56
PKP3-209ENST00000533069 H3BQV1 296 aa18.54■□□□□ 0.56
PKP3-209ENST00000533069 LAD1O00515 517 aa18.54■□□□□ 0.56
PKP3-209ENST00000533069 CSDE1O75534 798 aaKnown RBP18.54■□□□□ 0.56
PKP3-209ENST00000533069 EOMESO95936 686 aa18.54■□□□□ 0.56
PKP3-209ENST00000533069 SPATA31C1P0DKV0 1188 aa18.54■□□□□ 0.56
PKP3-209ENST00000533069 SKIP12755 728 aa18.54■□□□□ 0.56
PKP3-209ENST00000533069 MUTP22033 750 aa18.54■□□□□ 0.56
PKP3-209ENST00000533069 RARRES1P49788 294 aa18.54■□□□□ 0.56
PKP3-209ENST00000533069 FXR2P51116 673 aaKnown RBP eCLIP18.54■□□□□ 0.561e-10■■□□□ 11.6
PKP3-209ENST00000533069 PCBP1Q15365 356 aaKnown RBP eCLIP18.54■□□□□ 0.56
PKP3-209ENST00000533069 RILPL1Q5EBL4 403 aa18.54■□□□□ 0.56
PKP3-209ENST00000533069 FAM102BQ5T8I3 360 aa18.54■□□□□ 0.56
PKP3-209ENST00000533069 MCTP1Q6DN14 999 aa18.54■□□□□ 0.56
PKP3-209ENST00000533069 CATSPER4Q7RTX7 472 aa18.54■□□□□ 0.56
PKP3-209ENST00000533069 FERMT3Q86UX7 667 aa18.54■□□□□ 0.56
PKP3-209ENST00000533069 CATSPER3Q86XQ3 398 aa18.54■□□□□ 0.56
PKP3-209ENST00000533069 C4orf32Q8N8J7 132 aa18.54■□□□□ 0.56
PKP3-209ENST00000533069 RSPH1Q8WYR4 309 aa18.54■□□□□ 0.56
PKP3-209ENST00000533069 NACC1Q96RE7 527 aa18.54■□□□□ 0.56
PKP3-209ENST00000533069 COL25A1Q9BXS0 654 aaPredicted RBP18.54■□□□□ 0.56
PKP3-209ENST00000533069 RAB34Q9BZG1 259 aa18.54■□□□□ 0.56
PKP3-209ENST00000533069 XPNPEP1Q9NQW7 623 aa18.54■□□□□ 0.56
PKP3-209ENST00000533069 BMP2KQ9NSY1 1161 aaPredicted RBP18.54■□□□□ 0.56
PKP3-209ENST00000533069 PIN4Q9Y237 131 aaKnown RBP18.54■□□□□ 0.56
PKP3-209ENST00000533069 STK24Q9Y6E0 443 aa18.54■□□□□ 0.56
PKP3-209ENST00000533069 RALGAPA2Q2PPJ7 1873 aa18.54■□□□□ 0.56
PKP3-209ENST00000533069 SRGAP2CP0DJJ0 459 aa18.53■□□□□ 0.56
PKP3-209ENST00000533069 FGFR1P11362 822 aa18.53■□□□□ 0.56
PKP3-209ENST00000533069 RPA1P27694 616 aa18.53■□□□□ 0.56
PKP3-209ENST00000533069 PHKA2P46019 1235 aa18.53■□□□□ 0.56
PKP3-209ENST00000533069 TOB1P50616 345 aaPredicted RBP18.53■□□□□ 0.56
PKP3-209ENST00000533069 RAB27AP51159 221 aa18.53■□□□□ 0.56
PKP3-209ENST00000533069 TFDP1Q14186 410 aa18.53■□□□□ 0.56
PKP3-209ENST00000533069 NBR1Q14596 966 aa18.53■□□□□ 0.56
PKP3-209ENST00000533069 CSPP1Q1MSJ5 1256 aa18.53■□□□□ 0.56
PKP3-209ENST00000533069 ABI1Q8IZP0 508 aa18.53■□□□□ 0.56
PKP3-209ENST00000533069 PIGOQ8TEQ8 1089 aa18.53■□□□□ 0.56
PKP3-209ENST00000533069 EVPLQ92817 2033 aa18.53■□□□□ 0.56
PKP3-209ENST00000533069 AGPAT5Q9NUQ2 364 aa18.53■□□□□ 0.56
PKP3-209ENST00000533069 DBR1Q9UK59 544 aaKnown RBP18.53■□□□□ 0.56
PKP3-209ENST00000533069 MED24O75448 989 aa18.52■□□□□ 0.56
PKP3-209ENST00000533069 PRPHP41219 470 aa18.52■□□□□ 0.56
PKP3-209ENST00000533069 POU5F1BQ06416 359 aa18.52■□□□□ 0.56
PKP3-209ENST00000533069 PTGDRQ13258 359 aa18.52■□□□□ 0.56
PKP3-209ENST00000533069 PDIA5Q14554 519 aa18.52■□□□□ 0.56
PKP3-209ENST00000533069 SPOUT1Q5T280 376 aaKnown RBP18.52■□□□□ 0.56
PKP3-209ENST00000533069 TWF2Q6IBS0 349 aaKnown RBP18.52■□□□□ 0.56
PKP3-209ENST00000533069 ZNF598Q86UK7 904 aaKnown RBP18.52■□□□□ 0.56
PKP3-209ENST00000533069 LRRC43Q8N309 656 aa18.52■□□□□ 0.56
PKP3-209ENST00000533069 RNF149Q8NC42 400 aa18.52■□□□□ 0.56
PKP3-209ENST00000533069 NSUN3Q9H649 340 aaKnown RBP18.52■□□□□ 0.56
PKP3-209ENST00000533069 PLAGL2Q9UPG8 496 aa18.52■□□□□ 0.56
PKP3-209ENST00000533069 PCDHB6Q9Y5E3 794 aa18.52■□□□□ 0.56
PKP3-209ENST00000533069 PCDHB12Q9Y5F1 795 aa18.52■□□□□ 0.56
PKP3-209ENST00000533069 REV3LO60673 3130 aa18.51■□□□□ 0.55
PKP3-209ENST00000533069 GRM6O15303 877 aa18.51■□□□□ 0.55
PKP3-209ENST00000533069 LAG3P18627 525 aa18.51■□□□□ 0.55
PKP3-209ENST00000533069 KLHL23Q8NBE8 558 aa18.51■□□□□ 0.55
PKP3-209ENST00000533069 RNF169Q8NCN4 708 aa18.51■□□□□ 0.55
PKP3-209ENST00000533069 MCPH1Q8NEM0 835 aa18.51■□□□□ 0.55
PKP3-209ENST00000533069 MRPL9Q9BYD2 267 aaKnown RBP18.51■□□□□ 0.55
PKP3-209ENST00000533069 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.51■□□□□ 0.55
PKP3-209ENST00000533069 RNF19AQ9NV58 838 aa18.51■□□□□ 0.55
PKP3-209ENST00000533069 TYW1Q9NV66 732 aaKnown RBP18.51■□□□□ 0.55
PKP3-209ENST00000533069 LRWD1Q9UFC0 647 aa18.51■□□□□ 0.55
PKP3-209ENST00000533069 PRRC2BQ5JSZ5 2229 aaKnown RBP18.51■□□□□ 0.55
PKP3-209ENST00000533069 LOXHD1Q8IVV2 1947 aa18.51■□□□□ 0.55
PKP3-209ENST00000533069 MYO9BQ13459 2157 aa18.5■□□□□ 0.55
PKP3-209ENST00000533069 NCK2O43639 380 aa18.5■□□□□ 0.55
PKP3-209ENST00000533069 USO1O60763 962 aaKnown RBP18.5■□□□□ 0.55
PKP3-209ENST00000533069 ITGB1P05556 798 aa18.5■□□□□ 0.55
PKP3-209ENST00000533069 ARL2P36404 184 aa18.5■□□□□ 0.55
PKP3-209ENST00000533069 PTENP60484 403 aa18.5■□□□□ 0.55
PKP3-209ENST00000533069 TFF2Q03403 129 aa18.5■□□□□ 0.55
PKP3-209ENST00000533069 LARP1BQ659C4 914 aaKnown RBP18.5■□□□□ 0.55
PKP3-209ENST00000533069 POTEGQ6S5H5 508 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms