RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 DDX25Q9UHL0 483 aaKnown RBP19.21■□□□□ 0.67
RPUSD4-207ENST00000532800 PUF60Q9UHX1 559 aaKnown RBP19.21■□□□□ 0.67
RPUSD4-207ENST00000532800 FSD2A1L4K1 749 aa19.2■□□□□ 0.66
RPUSD4-207ENST00000532800 EML1O00423 815 aa19.2■□□□□ 0.66
RPUSD4-207ENST00000532800 EPB41L2O43491 1005 aaKnown RBP19.2■□□□□ 0.66
RPUSD4-207ENST00000532800 PPM1AP35813 382 aa19.2■□□□□ 0.66
RPUSD4-207ENST00000532800 TECP42680 631 aa19.2■□□□□ 0.66
RPUSD4-207ENST00000532800 NONOQ15233 471 aaKnown RBP eCLIP19.2■□□□□ 0.66
RPUSD4-207ENST00000532800 PLA2G4FQ68DD2 849 aa19.2■□□□□ 0.66
RPUSD4-207ENST00000532800 ANKRD54Q6NXT1 300 aa19.2■□□□□ 0.66
RPUSD4-207ENST00000532800 SYCE2Q6PIF2 218 aa19.2■□□□□ 0.66
RPUSD4-207ENST00000532800 MOXD1Q6UVY6 613 aa19.2■□□□□ 0.66
RPUSD4-207ENST00000532800 SLC39A11Q8N1S5 342 aa19.2■□□□□ 0.66
RPUSD4-207ENST00000532800 FBXL18Q96ME1 805 aa19.2■□□□□ 0.66
RPUSD4-207ENST00000532800 GCOM2Q9BZD3 368 aaPredicted RBP19.2■□□□□ 0.66
RPUSD4-207ENST00000532800 TM6SF1Q9BZW5 370 aa19.2■□□□□ 0.66
RPUSD4-207ENST00000532800 SPG21Q9NZD8 308 aa19.2■□□□□ 0.66
RPUSD4-207ENST00000532800 DDX11L8A8MPP1 907 aa19.19■□□□□ 0.66
RPUSD4-207ENST00000532800 NT5C1B-RDH14C9J2C7 533 aa19.19■□□□□ 0.66
RPUSD4-207ENST00000532800 EOMESO95936 686 aa19.19■□□□□ 0.66
RPUSD4-207ENST00000532800 KRT17Q04695 432 aa19.19■□□□□ 0.66
RPUSD4-207ENST00000532800 LETM2Q2VYF4 491 aa19.19■□□□□ 0.66
RPUSD4-207ENST00000532800 LONRF3Q496Y0 759 aa19.19■□□□□ 0.66
RPUSD4-207ENST00000532800 TMEM184AQ6ZMB5 413 aa19.19■□□□□ 0.66
RPUSD4-207ENST00000532800 ANO5Q75V66 913 aa19.19■□□□□ 0.66
RPUSD4-207ENST00000532800 KRT25Q7Z3Z0 450 aa19.19■□□□□ 0.66
RPUSD4-207ENST00000532800 TMC7Q7Z402 723 aa19.19■□□□□ 0.66
RPUSD4-207ENST00000532800 RHPN2Q8IUC4 686 aa19.19■□□□□ 0.66
RPUSD4-207ENST00000532800 KSR1Q8IVT5 923 aa19.19■□□□□ 0.66
RPUSD4-207ENST00000532800 LPPQ93052 612 aa19.19■□□□□ 0.66
RPUSD4-207ENST00000532800 S1PR5Q9H228 398 aa19.19■□□□□ 0.66
RPUSD4-207ENST00000532800 NGRNQ9NPE2 291 aaKnown RBP19.19■□□□□ 0.66
RPUSD4-207ENST00000532800 PDRG1Q9NUG6 133 aa19.19■□□□□ 0.66
RPUSD4-207ENST00000532800 DACT1Q9NYF0 836 aa19.19■□□□□ 0.66
RPUSD4-207ENST00000532800 SUCLA2Q9P2R7 463 aaPredicted RBP19.19■□□□□ 0.66
RPUSD4-207ENST00000532800 CDH22Q9UJ99 828 aa19.19■□□□□ 0.66
RPUSD4-207ENST00000532800 MAFO75444 373 aaPredicted RBP19.18■□□□□ 0.66
RPUSD4-207ENST00000532800 PHKA2P46019 1235 aa19.18■□□□□ 0.66
RPUSD4-207ENST00000532800 SCRN1Q12765 414 aa19.18■□□□□ 0.66
RPUSD4-207ENST00000532800 GALNT17Q6IS24 598 aa19.18■□□□□ 0.66
RPUSD4-207ENST00000532800 CPLX2Q6PUV4 134 aaKnown RBP19.18■□□□□ 0.66
RPUSD4-207ENST00000532800 NLRP4Q96MN2 994 aa19.18■□□□□ 0.66
RPUSD4-207ENST00000532800 GJB4Q9NTQ9 266 aa19.18■□□□□ 0.66
RPUSD4-207ENST00000532800 VAV3Q9UKW4 847 aa19.18■□□□□ 0.66
RPUSD4-207ENST00000532800 PIN4Q9Y237 131 aaKnown RBP19.18■□□□□ 0.66
RPUSD4-207ENST00000532800 PIEZO1Q92508 2521 aa19.17■□□□□ 0.66
RPUSD4-207ENST00000532800 TMEM221A6NGB7 291 aa19.17■□□□□ 0.66
RPUSD4-207ENST00000532800 MEIS3P2A8K0S8 358 aa19.17■□□□□ 0.66
RPUSD4-207ENST00000532800 M0R296 226 aa19.17■□□□□ 0.66
RPUSD4-207ENST00000532800 SRGAP2BP0DMP2 458 aa19.17■□□□□ 0.66
RPUSD4-207ENST00000532800 SFPQP23246 707 aaKnown RBP eCLIP19.17■□□□□ 0.66
RPUSD4-207ENST00000532800 DNM2P50570 870 aa19.17■□□□□ 0.66
RPUSD4-207ENST00000532800 NPEPPSP55786 919 aa19.17■□□□□ 0.66
RPUSD4-207ENST00000532800 BCAR1P56945 870 aa19.17■□□□□ 0.66
RPUSD4-207ENST00000532800 PSMC5P62195 406 aa19.17■□□□□ 0.66
RPUSD4-207ENST00000532800 ZXDAP98168 799 aa19.17■□□□□ 0.66
RPUSD4-207ENST00000532800 NHLH1Q02575 133 aa19.17■□□□□ 0.66
RPUSD4-207ENST00000532800 TWF2Q6IBS0 349 aaKnown RBP19.17■□□□□ 0.66
RPUSD4-207ENST00000532800 TRIM67Q6ZTA4 783 aa19.17■□□□□ 0.66
RPUSD4-207ENST00000532800 ALYREFQ86V81 257 aaKnown RBP19.17■□□□□ 0.66
RPUSD4-207ENST00000532800 ZNF410Q86VK4 478 aa19.17■□□□□ 0.66
RPUSD4-207ENST00000532800 TMEM173Q86WV6 379 aaPredicted RBP19.17■□□□□ 0.66
RPUSD4-207ENST00000532800 ZNF579Q8NAF0 562 aaKnown RBP19.17■□□□□ 0.66
RPUSD4-207ENST00000532800 MFSD14AQ96MC6 490 aa19.17■□□□□ 0.66
RPUSD4-207ENST00000532800 PHF20Q9BVI0 1012 aa19.17■□□□□ 0.66
RPUSD4-207ENST00000532800 MRPL9Q9BYD2 267 aaKnown RBP19.17■□□□□ 0.66
RPUSD4-207ENST00000532800 CHST12Q9NRB3 414 aa19.17■□□□□ 0.66
RPUSD4-207ENST00000532800 WRAP73Q9P2S5 460 aaPredicted RBP19.17■□□□□ 0.66
RPUSD4-207ENST00000532800 C2orf71A6NGG8 1288 aa19.16■□□□□ 0.66
RPUSD4-207ENST00000532800 ZC3H11AO75152 810 aaKnown RBP eCLIP19.16■□□□□ 0.66
RPUSD4-207ENST00000532800 SP100P23497 879 aaPredicted RBP19.16■□□□□ 0.66
RPUSD4-207ENST00000532800 PPP2R5CQ13362 524 aa19.16■□□□□ 0.66
RPUSD4-207ENST00000532800 SMC1AQ14683 1233 aaKnown RBP19.16■□□□□ 0.66
RPUSD4-207ENST00000532800 FAM177A1Q8N128 213 aaPredicted RBP19.16■□□□□ 0.66
RPUSD4-207ENST00000532800 MRPL43Q8N983 215 aaKnown RBP19.16■□□□□ 0.66
RPUSD4-207ENST00000532800 OXER1Q8TDS5 423 aa19.16■□□□□ 0.66
RPUSD4-207ENST00000532800 TRAIPQ9BWF2 469 aa19.16■□□□□ 0.66
RPUSD4-207ENST00000532800 KCNMB3Q9NPA1 279 aa19.16■□□□□ 0.66
RPUSD4-207ENST00000532800 CYP26B1Q9NR63 512 aa19.16■□□□□ 0.66
RPUSD4-207ENST00000532800 HCFC2Q9Y5Z7 792 aa19.16■□□□□ 0.66
RPUSD4-207ENST00000532800 ARID2Q68CP9 1835 aa19.16■□□□□ 0.66
RPUSD4-207ENST00000532800 CCDC194A0A1B0GVG4 234 aa19.15■□□□□ 0.66
RPUSD4-207ENST00000532800 CA8P35219 290 aa19.15■□□□□ 0.66
RPUSD4-207ENST00000532800 CDC42EP1Q00587 391 aa19.15■□□□□ 0.66
RPUSD4-207ENST00000532800 CATSPER4Q7RTX7 472 aa19.15■□□□□ 0.66
RPUSD4-207ENST00000532800 NEK8Q86SG6 692 aa19.15■□□□□ 0.66
RPUSD4-207ENST00000532800 BCL7CQ8WUZ0 217 aaPredicted RBP19.15■□□□□ 0.66
RPUSD4-207ENST00000532800 AUTS2Q8WXX7 1259 aa19.15■□□□□ 0.66
RPUSD4-207ENST00000532800 SLKQ9H2G2 1235 aaPredicted RBP19.15■□□□□ 0.66
RPUSD4-207ENST00000532800 BMP2KQ9NSY1 1161 aaPredicted RBP19.15■□□□□ 0.66
RPUSD4-207ENST00000532800 FAM105AQ9NUU6 356 aa19.15■□□□□ 0.66
RPUSD4-207ENST00000532800 INPP5FQ9Y2H2 1132 aa19.15■□□□□ 0.66
RPUSD4-207ENST00000532800 KMT2EQ8IZD2 1858 aa19.14■□□□□ 0.65
RPUSD4-207ENST00000532800 CLASP2O75122 1294 aaKnown RBP19.14■□□□□ 0.65
RPUSD4-207ENST00000532800 QARSP47897 775 aaKnown RBP19.14■□□□□ 0.65
RPUSD4-207ENST00000532800 ALDH7A1P49419 539 aaKnown RBP19.14■□□□□ 0.65
RPUSD4-207ENST00000532800 EARS2Q5JPH6 523 aaKnown RBP19.14■□□□□ 0.65
RPUSD4-207ENST00000532800 PIK3AP1Q6ZUJ8 805 aa19.14■□□□□ 0.65
RPUSD4-207ENST00000532800 BMP8AQ7Z5Y6 402 aa19.14■□□□□ 0.65
RPUSD4-207ENST00000532800 HAS1Q92839 578 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms