RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 FAM228AQ86W67 206 aa27.54■■■□□ 2
USP48-214ENST00000532737 RAD54LQ92698 747 aa27.54■■■□□ 2
USP48-214ENST00000532737 GCOM2Q9BZD3 368 aaPredicted RBP27.54■■■□□ 2
USP48-214ENST00000532737 SCAND2PQ9GZW5 306 aaPredicted RBP27.54■■■□□ 2
USP48-214ENST00000532737 GDPD2Q9HCC8 539 aa27.54■■■□□ 2
USP48-214ENST00000532737 ERVK-5Q9HDB9 667 aa27.54■■■□□ 2
USP48-214ENST00000532737 ABHD14A-ACY1A0A1B0GW23 586 aa27.53■■■□□ 2
USP48-214ENST00000532737 ZBBXA8MT70 800 aa27.53■■■□□ 2
USP48-214ENST00000532737 CSDE1O75534 798 aaKnown RBP27.53■■■□□ 2
USP48-214ENST00000532737 PAK2Q13177 524 aa27.53■■■□□ 2
USP48-214ENST00000532737 MCM6Q14566 821 aa27.53■■■□□ 2
USP48-214ENST00000532737 NAALADL2Q58DX5 795 aa27.53■■■□□ 2
USP48-214ENST00000532737 IPO9Q96P70 1041 aaKnown RBP27.53■■■□□ 2
USP48-214ENST00000532737 IFT122Q9HBG6 1241 aa27.53■■■□□ 2
USP48-214ENST00000532737 ST3GAL5Q9UNP4 418 aa27.53■■■□□ 2
USP48-214ENST00000532737 UNC80Q8N2C7 3258 aa27.52■■■□□ 2
USP48-214ENST00000532737 BAIAP3O94812 1187 aa27.52■■■□□ 2
USP48-214ENST00000532737 NFX1Q12986 1120 aaKnown RBP27.52■■■□□ 2
USP48-214ENST00000532737 CAPSQ13938 189 aa27.52■■■□□ 2
USP48-214ENST00000532737 DHX8Q14562 1220 aaKnown RBP27.52■■■□□ 2
USP48-214ENST00000532737 RNF149Q8NC42 400 aa27.52■■■□□ 2
USP48-214ENST00000532737 APBB2Q92870 758 aa27.52■■■□□ 2
USP48-214ENST00000532737 GUCD1Q96NT3 240 aa27.52■■■□□ 2
USP48-214ENST00000532737 MTIF3Q9H2K0 278 aaKnown RBP27.52■■■□□ 2
USP48-214ENST00000532737 FGFR4P22455 802 aa27.51■■□□□ 1.99
USP48-214ENST00000532737 ARSHQ5FYA8 562 aa27.51■■□□□ 1.99
USP48-214ENST00000532737 RESP18Q5W5W9 173 aa27.51■■□□□ 1.99
USP48-214ENST00000532737 CCDC73Q6ZRK6 1079 aa27.51■■□□□ 1.99
USP48-214ENST00000532737 DAW1Q8N136 415 aa27.51■■□□□ 1.99
USP48-214ENST00000532737 PDILTQ8N807 584 aa27.51■■□□□ 1.99
USP48-214ENST00000532737 BSNDQ8WZ55 320 aa27.51■■□□□ 1.99
USP48-214ENST00000532737 LARP4BQ92615 738 aaKnown RBP27.51■■□□□ 1.99
USP48-214ENST00000532737 TMX1Q9H3N1 280 aa27.51■■□□□ 1.99
USP48-214ENST00000532737 STK17AQ9UEE5 414 aa27.51■■□□□ 1.99
USP48-214ENST00000532737 SLC4A7Q9Y6M7 1214 aa27.51■■□□□ 1.99
USP48-214ENST00000532737 GPR182O15218 404 aa27.5■■□□□ 1.99
USP48-214ENST00000532737 GUCY2CP25092 1073 aa27.5■■□□□ 1.99
USP48-214ENST00000532737 WDR5P61964 334 aaKnown RBP27.5■■□□□ 1.99
USP48-214ENST00000532737 LIN28BQ6ZN17 250 aaKnown RBP eCLIP27.5■■□□□ 1.992e-7■■■□□ 15.5
USP48-214ENST00000532737 GPBP1Q86WP2 473 aa27.5■■□□□ 1.99
USP48-214ENST00000532737 NPHP3-ACAD11A0A0J9YXS1 232 aa27.49■■□□□ 1.99
USP48-214ENST00000532737 HIP1RO75146 1068 aa27.49■■□□□ 1.99
USP48-214ENST00000532737 STAT6P42226 847 aa27.49■■□□□ 1.99
USP48-214ENST00000532737 PTENP60484 403 aa27.49■■□□□ 1.99
USP48-214ENST00000532737 RAD51AP2Q09MP3 1159 aa27.49■■□□□ 1.99
USP48-214ENST00000532737 MAPK7Q13164 816 aa27.49■■□□□ 1.99
USP48-214ENST00000532737 TFDP1Q14186 410 aa27.49■■□□□ 1.99
USP48-214ENST00000532737 ADALQ6DHV7 355 aa27.49■■□□□ 1.99
USP48-214ENST00000532737 RTN4RL1Q86UN2 441 aaPredicted RBP27.49■■□□□ 1.99
USP48-214ENST00000532737 KIFAP3Q92845 792 aa27.49■■□□□ 1.99
USP48-214ENST00000532737 MINDY3Q9H8M7 445 aa27.49■■□□□ 1.99
USP48-214ENST00000532737 LOC101059915A0A1B0GWI6 518 aaPredicted RBP27.48■■□□□ 1.99
USP48-214ENST00000532737 EFCAB14O75071 495 aa27.48■■□□□ 1.99
USP48-214ENST00000532737 PHKA2P46019 1235 aa27.48■■□□□ 1.99
USP48-214ENST00000532737 POU5F1BQ06416 359 aa27.48■■□□□ 1.99
USP48-214ENST00000532737 ODR4Q5SWX8 454 aa27.48■■□□□ 1.99
USP48-214ENST00000532737 SRGAP1Q7Z6B7 1085 aa27.48■■□□□ 1.99
USP48-214ENST00000532737 LINC01599Q8WXQ3 324 aa27.48■■□□□ 1.99
USP48-214ENST00000532737 INO80BQ9C086 356 aaPredicted RBP27.48■■□□□ 1.99
USP48-214ENST00000532737 FAM13BQ9NYF5 915 aa27.48■■□□□ 1.99
USP48-214ENST00000532737 KCND2Q9NZV8 630 aa27.48■■□□□ 1.99
USP48-214ENST00000532737 LOXHD1Q8IVV2 1947 aa27.47■■□□□ 1.99
USP48-214ENST00000532737 GRXCR1A8MXD5 290 aa27.47■■□□□ 1.99
USP48-214ENST00000532737 ENPP3O14638 875 aa27.47■■□□□ 1.99
USP48-214ENST00000532737 KCNJ6P48051 423 aa27.47■■□□□ 1.99
USP48-214ENST00000532737 DEFB103AP81534 67 aa27.47■■□□□ 1.99
USP48-214ENST00000532737 E2F4Q16254 413 aa27.47■■□□□ 1.99
USP48-214ENST00000532737 IFNLR1Q8IU57 520 aaPredicted RBP27.47■■□□□ 1.99
USP48-214ENST00000532737 TIPINQ9BVW5 301 aa27.47■■□□□ 1.99
USP48-214ENST00000532737 TCHHQ07283 1943 aa27.47■■□□□ 1.99
USP48-214ENST00000532737 LRRIQ4A6NIV6 560 aa27.46■■□□□ 1.99
USP48-214ENST00000532737 SFI1A8K8P3 1242 aa27.46■■□□□ 1.99
USP48-214ENST00000532737 MGEA5O60502 916 aa27.46■■□□□ 1.99
USP48-214ENST00000532737 CMA1P23946 247 aa27.46■■□□□ 1.99
USP48-214ENST00000532737 CACNB1Q02641 598 aaPredicted RBP27.46■■□□□ 1.99
USP48-214ENST00000532737 DHX58Q96C10 678 aa27.46■■□□□ 1.99
USP48-214ENST00000532737 FTHL17Q9BXU8 183 aa27.46■■□□□ 1.99
USP48-214ENST00000532737 ATP2A2P16615 1042 aaKnown RBP27.45■■□□□ 1.98
USP48-214ENST00000532737 SFPQP23246 707 aaKnown RBP eCLIP27.45■■□□□ 1.98
USP48-214ENST00000532737 NAMPTP43490 491 aa27.45■■□□□ 1.98
USP48-214ENST00000532737 DSC3Q14574 896 aa27.45■■□□□ 1.98
USP48-214ENST00000532737 SV2BQ7L1I2 683 aa27.45■■□□□ 1.98
USP48-214ENST00000532737 TMCO2Q7Z6W1 182 aaPredicted RBP27.45■■□□□ 1.98
USP48-214ENST00000532737 DRC1Q96MC2 740 aa27.45■■□□□ 1.98
USP48-214ENST00000532737 FAM161BQ96MY7 647 aa27.45■■□□□ 1.98
USP48-214ENST00000532737 REEP2Q9BRK0 252 aa27.45■■□□□ 1.98
USP48-214ENST00000532737 KCNH3Q9ULD8 1083 aa27.45■■□□□ 1.98
USP48-214ENST00000532737 EYSQ5T1H1 3165 aa27.44■■□□□ 1.98
USP48-214ENST00000532737 HSFX4A0A1B0GTS1 333 aaPredicted RBP27.44■■□□□ 1.98
USP48-214ENST00000532737 A0A1B0GVL5 298 aa27.44■■□□□ 1.98
USP48-214ENST00000532737 HSFX3A0A1B0GWH4 333 aaPredicted RBP27.44■■□□□ 1.98
USP48-214ENST00000532737 POLR2DO15514 142 aaKnown RBP27.44■■□□□ 1.98
USP48-214ENST00000532737 MBTD1Q05BQ5 628 aa27.44■■□□□ 1.98
USP48-214ENST00000532737 GIT2Q14161 759 aa27.44■■□□□ 1.98
USP48-214ENST00000532737 PPP2R5AQ15172 486 aa27.44■■□□□ 1.98
USP48-214ENST00000532737 TPRNQ4KMQ1 711 aa27.44■■□□□ 1.98
USP48-214ENST00000532737 CATSPER4Q7RTX7 472 aa27.44■■□□□ 1.98
USP48-214ENST00000532737 IQUBQ8NA54 791 aa27.44■■□□□ 1.98
USP48-214ENST00000532737 PHOSPHO2Q8TCD6 241 aa27.44■■□□□ 1.98
USP48-214ENST00000532737 IFT74Q96LB3 600 aa27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms