RNA–Protein interactions for RNA: ENST00000532297.5

NXF1-213, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NXF1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-213ENST00000532297 RBM46Q8TBY0 533 aaKnown RBP16.1■□□□□ 0.17
NXF1-213ENST00000532297 REEP2Q9BRK0 252 aa16.1■□□□□ 0.17
NXF1-213ENST00000532297 MTFR1LQ9H019 292 aa16.1■□□□□ 0.17
NXF1-213ENST00000532297 SPATS2LQ9NUQ6 558 aaKnown RBP16.1■□□□□ 0.17
NXF1-213ENST00000532297 GGT7Q9UJ14 662 aa16.1■□□□□ 0.17
NXF1-213ENST00000532297 LTBP4Q8N2S1 1624 aa16.1■□□□□ 0.17
NXF1-213ENST00000532297 AFF2P51816 1311 aa16.1■□□□□ 0.17
NXF1-213ENST00000532297 NQO1P15559 274 aaKnown RBP16.1■□□□□ 0.17
NXF1-213ENST00000532297 MMP13P45452 471 aa16.1■□□□□ 0.17
NXF1-213ENST00000532297 SEPT2Q15019 361 aa16.1■□□□□ 0.17
NXF1-213ENST00000532297 FOXR2Q6PJQ5 311 aa16.1■□□□□ 0.17
NXF1-213ENST00000532297 SPICE1Q8N0Z3 855 aa16.1■□□□□ 0.17
NXF1-213ENST00000532297 SEC14L1Q92503 715 aa16.1■□□□□ 0.17
NXF1-213ENST00000532297 INTS9Q9NV88 658 aaKnown RBP16.1■□□□□ 0.17
NXF1-213ENST00000532297 HDAC9Q9UKV0 1011 aa16.1■□□□□ 0.17
NXF1-213ENST00000532297 EME2A4GXA9 379 aaPredicted RBP16.09■□□□□ 0.17
NXF1-213ENST00000532297 PPEF1O14829 653 aaPredicted RBP16.09■□□□□ 0.17
NXF1-213ENST00000532297 ZBTB48P10074 688 aaPredicted RBP16.09■□□□□ 0.17
NXF1-213ENST00000532297 SLC12A3P55017 1021 aa16.09■□□□□ 0.17
NXF1-213ENST00000532297 JAG1P78504 1218 aa16.09■□□□□ 0.17
NXF1-213ENST00000532297 IKQ13123 557 aaPredicted RBP16.09■□□□□ 0.17
NXF1-213ENST00000532297 SLMAPQ14BN4 828 aa16.09■□□□□ 0.17
NXF1-213ENST00000532297 C10orf76Q5T2E6 689 aa16.09■□□□□ 0.17
NXF1-213ENST00000532297 TPCN2Q8NHX9 752 aa16.09■□□□□ 0.17
NXF1-213ENST00000532297 FAM163AQ96GL9 167 aaPredicted RBP16.09■□□□□ 0.17
NXF1-213ENST00000532297 ADAM7Q9H2U9 754 aa16.09■□□□□ 0.17
NXF1-213ENST00000532297 RGL1Q9NZL6 768 aa16.09■□□□□ 0.17
NXF1-213ENST00000532297 ATF5Q9Y2D1 282 aaPredicted RBP16.09■□□□□ 0.17
NXF1-213ENST00000532297 LY75O60449 1722 aa16.09■□□□□ 0.17
NXF1-213ENST00000532297 FAM86B1E9PN63 330 aa16.09■□□□□ 0.17
NXF1-213ENST00000532297 UBOX5O94941 541 aa16.09■□□□□ 0.17
NXF1-213ENST00000532297 FAM86B2P0C5J1 330 aa16.09■□□□□ 0.17
NXF1-213ENST00000532297 IFNAR2P48551 515 aa16.09■□□□□ 0.17
NXF1-213ENST00000532297 ALDH5A1P51649 535 aaPredicted RBP16.09■□□□□ 0.17
NXF1-213ENST00000532297 CDCA2Q69YH5 1023 aaPredicted RBP16.09■□□□□ 0.17
NXF1-213ENST00000532297 DAAM2Q86T65 1068 aa16.09■□□□□ 0.17
NXF1-213ENST00000532297 CCDC65Q8IXS2 484 aa16.09■□□□□ 0.17
NXF1-213ENST00000532297 PRCCQ92733 491 aaPredicted RBP16.09■□□□□ 0.17
NXF1-213ENST00000532297 SAAL1Q96ER3 474 aa16.09■□□□□ 0.17
NXF1-213ENST00000532297 CEP63Q96MT8 703 aa16.09■□□□□ 0.17
NXF1-213ENST00000532297 RUSC1Q9BVN2 902 aa16.09■□□□□ 0.17
NXF1-213ENST00000532297 NT5C3AQ9H0P0 336 aa16.09■□□□□ 0.17
NXF1-213ENST00000532297 DHX36Q9H2U1 1008 aaKnown RBP16.09■□□□□ 0.17
NXF1-213ENST00000532297 KCNMB3Q9NPA1 279 aa16.09■□□□□ 0.17
NXF1-213ENST00000532297 CHMP2AO43633 222 aa16.09■□□□□ 0.17
NXF1-213ENST00000532297 BRD2P25440 801 aaKnown RBP16.09■□□□□ 0.17
NXF1-213ENST00000532297 RASGEF1CQ8N431 466 aa16.09■□□□□ 0.17
NXF1-213ENST00000532297 PIGOQ8TEQ8 1089 aa16.09■□□□□ 0.17
NXF1-213ENST00000532297 TXLNGYQ9BZA5 131 aa16.09■□□□□ 0.17
NXF1-213ENST00000532297 AZI2Q9H6S1 392 aa16.09■□□□□ 0.17
NXF1-213ENST00000532297 CD2APQ9Y5K6 639 aa16.09■□□□□ 0.17
NXF1-213ENST00000532297 MEIS2O14770 477 aa16.08■□□□□ 0.16
NXF1-213ENST00000532297 RGS16O15492 202 aaPredicted RBP16.08■□□□□ 0.16
NXF1-213ENST00000532297 SMNDC1O75940 238 aaKnown RBP eCLIP16.08■□□□□ 0.16
NXF1-213ENST00000532297 AKAP3O75969 853 aa16.08■□□□□ 0.16
NXF1-213ENST00000532297 GNA14O95837 355 aa16.08■□□□□ 0.16
NXF1-213ENST00000532297 ALADP13716 330 aa16.08■□□□□ 0.16
NXF1-213ENST00000532297 IFI35P80217 286 aaPredicted RBP16.08■□□□□ 0.16
NXF1-213ENST00000532297 COG2Q14746 738 aa16.08■□□□□ 0.16
NXF1-213ENST00000532297 APOBEC3HQ6NTF7 200 aaKnown RBP16.08■□□□□ 0.16
NXF1-213ENST00000532297 PPP1R18Q6NYC8 613 aa16.08■□□□□ 0.16
NXF1-213ENST00000532297 ALKBH5Q6P6C2 394 aaKnown RBP16.08■□□□□ 0.16
NXF1-213ENST00000532297 ATP8B4Q8TF62 1192 aa16.08■□□□□ 0.16
NXF1-213ENST00000532297 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.08■□□□□ 0.16
NXF1-213ENST00000532297 NAGPAQ9UK23 515 aa16.08■□□□□ 0.16
NXF1-213ENST00000532297 RBM5P52756 815 aaKnown RBP eCLIP16.08■□□□□ 0.164e-6■■■■□ 21.7
NXF1-213ENST00000532297 NCALDP61601 193 aa16.08■□□□□ 0.16
NXF1-213ENST00000532297 SPIRE1Q08AE8 756 aa16.08■□□□□ 0.16
NXF1-213ENST00000532297 DENND2CQ68D51 928 aa16.08■□□□□ 0.16
NXF1-213ENST00000532297 MIS18BP1Q6P0N0 1132 aa16.08■□□□□ 0.16
NXF1-213ENST00000532297 CERKQ8TCT0 537 aa16.08■□□□□ 0.16
NXF1-213ENST00000532297 NEK9Q8TD19 979 aa16.08■□□□□ 0.16
NXF1-213ENST00000532297 PGM2Q96G03 612 aa16.08■□□□□ 0.16
NXF1-213ENST00000532297 NSRP1Q9H0G5 558 aaKnown RBP16.08■□□□□ 0.16
NXF1-213ENST00000532297 RAB17Q9H0T7 212 aa16.08■□□□□ 0.16
NXF1-213ENST00000532297 ECT2Q9H8V3 914 aa16.08■□□□□ 0.16
NXF1-213ENST00000532297 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.08■□□□□ 0.164e-6■■■■■ 63.2
NXF1-213ENST00000532297 KDM3AQ9Y4C1 1321 aa16.08■□□□□ 0.16
NXF1-213ENST00000532297 SIPA1L1O43166 1804 aa16.08■□□□□ 0.16
NXF1-213ENST00000532297 SPDYE3A6NKU9 549 aa16.07■□□□□ 0.16
NXF1-213ENST00000532297 CCDC169A6NNP5 214 aa16.07■□□□□ 0.16
NXF1-213ENST00000532297 ENO4A6NNW6 628 aa16.07■□□□□ 0.16
NXF1-213ENST00000532297 IGF2BP3O00425 579 aaKnown RBP eCLIP16.07■□□□□ 0.16
NXF1-213ENST00000532297 FGGP02679 453 aa16.07■□□□□ 0.16
NXF1-213ENST00000532297 SPATA31C1P0DKV0 1188 aa16.07■□□□□ 0.16
NXF1-213ENST00000532297 RARAP10276 462 aa16.07■□□□□ 0.16
NXF1-213ENST00000532297 PMS2P54278 862 aa16.07■□□□□ 0.16
NXF1-213ENST00000532297 ARHGAP4P98171 946 aa16.07■□□□□ 0.16
NXF1-213ENST00000532297 GIT2Q14161 759 aa16.07■□□□□ 0.16
NXF1-213ENST00000532297 SPDYCQ5MJ68 293 aa16.07■□□□□ 0.16
NXF1-213ENST00000532297 IRF2BP2Q7Z5L9 587 aa16.07■□□□□ 0.16
NXF1-213ENST00000532297 EPB41L4BQ9H329 900 aa16.07■□□□□ 0.16
NXF1-213ENST00000532297 PCDHB13Q9Y5F0 798 aa16.07■□□□□ 0.16
NXF1-213ENST00000532297 UBR3Q6ZT12 1888 aa16.07■□□□□ 0.16
NXF1-213ENST00000532297 EML1O00423 815 aa16.07■□□□□ 0.16
NXF1-213ENST00000532297 NUDT17P0C025 328 aa16.07■□□□□ 0.16
NXF1-213ENST00000532297 CCND1P24385 295 aa16.07■□□□□ 0.16
NXF1-213ENST00000532297 COPB2P35606 906 aa16.07■□□□□ 0.16
NXF1-213ENST00000532297 ZC2HC1CQ53FD0 456 aaPredicted RBP16.07■□□□□ 0.16
NXF1-213ENST00000532297 SLFN13Q68D06 897 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms