RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 VTI1AQ96AJ9 217 aa13.89□□□□□ -0.19
COPB1-208ENST00000532088 C7orf25Q9BPX7 421 aa13.89□□□□□ -0.19
COPB1-208ENST00000532088 PANK2Q9BZ23 570 aa13.89□□□□□ -0.19
COPB1-208ENST00000532088 ATP6V0A4Q9HBG4 840 aa13.89□□□□□ -0.19
COPB1-208ENST00000532088 DACT1Q9NYF0 836 aa13.89□□□□□ -0.19
COPB1-208ENST00000532088 ODF2LQ9ULJ1 636 aa13.89□□□□□ -0.19
COPB1-208ENST00000532088 PCDHA2Q9Y5H9 948 aa13.89□□□□□ -0.19
COPB1-208ENST00000532088 SMIM35A0A1B0GVV1 85 aa13.88□□□□□ -0.19
COPB1-208ENST00000532088 TMOD1P28289 359 aa13.88□□□□□ -0.19
COPB1-208ENST00000532088 POLGP54098 1239 aaPredicted RBP13.88□□□□□ -0.19
COPB1-208ENST00000532088 RTP1P59025 263 aa13.88□□□□□ -0.19
COPB1-208ENST00000532088 CDC42EP1Q00587 391 aa13.88□□□□□ -0.19
COPB1-208ENST00000532088 SKOR2Q2VWA4 1001 aaPredicted RBP13.88□□□□□ -0.19
COPB1-208ENST00000532088 MARCH8Q5T0T0 291 aa13.88□□□□□ -0.19
COPB1-208ENST00000532088 TAF2Q6P1X5 1199 aa13.88□□□□□ -0.19
COPB1-208ENST00000532088 SLC39A5Q6ZMH5 540 aa13.88□□□□□ -0.19
COPB1-208ENST00000532088 ANKRD33Q7Z3H0 272 aa13.88□□□□□ -0.19
COPB1-208ENST00000532088 RPAINQ86UA6 219 aa13.88□□□□□ -0.19
COPB1-208ENST00000532088 LINC01465Q8N7H1 131 aa13.88□□□□□ -0.19
COPB1-208ENST00000532088 GPT2Q8TD30 523 aa13.88□□□□□ -0.19
COPB1-208ENST00000532088 TCP11Q8WWU5 503 aa13.88□□□□□ -0.19
COPB1-208ENST00000532088 TOX2Q96NM4 488 aa13.88□□□□□ -0.19
COPB1-208ENST00000532088 MTRQ99707 1265 aa13.88□□□□□ -0.19
COPB1-208ENST00000532088 C17orf75Q9HAS0 396 aa13.88□□□□□ -0.19
COPB1-208ENST00000532088 SETD4Q9NVD3 440 aa13.88□□□□□ -0.19
COPB1-208ENST00000532088 KCNG1Q9UIX4 513 aa13.88□□□□□ -0.19
COPB1-208ENST00000532088 TUBE1Q9UJT0 475 aa13.88□□□□□ -0.19
COPB1-208ENST00000532088 PCDHB3Q9Y5E6 796 aa13.88□□□□□ -0.19
COPB1-208ENST00000532088 TMEM150BA6NC51 233 aa13.87□□□□□ -0.19
COPB1-208ENST00000532088 SPTLC1O15269 473 aa13.87□□□□□ -0.19
COPB1-208ENST00000532088 CAND2O75155 1236 aa13.87□□□□□ -0.19
COPB1-208ENST00000532088 KLRC1P26715 233 aa13.87□□□□□ -0.19
COPB1-208ENST00000532088 PTK7Q13308 1070 aa13.87□□□□□ -0.19
COPB1-208ENST00000532088 EMC2Q15006 297 aa13.87□□□□□ -0.19
COPB1-208ENST00000532088 KLHL40Q2TBA0 621 aa13.87□□□□□ -0.19
COPB1-208ENST00000532088 ARSHQ5FYA8 562 aa13.87□□□□□ -0.19
COPB1-208ENST00000532088 IER5Q5VY09 327 aa13.87□□□□□ -0.19
COPB1-208ENST00000532088 GDF6Q6KF10 455 aaPredicted RBP13.87□□□□□ -0.19
COPB1-208ENST00000532088 GPBP1Q86WP2 473 aa13.87□□□□□ -0.19
COPB1-208ENST00000532088 NME8Q8N427 588 aa13.87□□□□□ -0.19
COPB1-208ENST00000532088 KIFAP3Q92845 792 aa13.87□□□□□ -0.19
COPB1-208ENST00000532088 PAGE5Q96GU1 130 aa13.87□□□□□ -0.19
COPB1-208ENST00000532088 DRC1Q96MC2 740 aa13.87□□□□□ -0.19
COPB1-208ENST00000532088 TRIM9Q9C026 710 aa13.87□□□□□ -0.19
COPB1-208ENST00000532088 SENP6Q9GZR1 1112 aaPredicted RBP13.87□□□□□ -0.19
COPB1-208ENST00000532088 FRMD3A2A2Y4 597 aa13.86□□□□□ -0.19
COPB1-208ENST00000532088 MYMKA6NI61 221 aa13.86□□□□□ -0.19
COPB1-208ENST00000532088 TLR3O15455 904 aaKnown RBP13.86□□□□□ -0.19
COPB1-208ENST00000532088 ASAP2O43150 1006 aa13.86□□□□□ -0.19
COPB1-208ENST00000532088 USO1O60763 962 aaKnown RBP13.86□□□□□ -0.19
COPB1-208ENST00000532088 SSBP05455 408 aaKnown RBP eCLIP13.86□□□□□ -0.19
COPB1-208ENST00000532088 NDUFV2P19404 249 aa13.86□□□□□ -0.19
COPB1-208ENST00000532088 EN2P19622 333 aaPredicted RBP13.86□□□□□ -0.19
COPB1-208ENST00000532088 SCP2P22307 547 aa13.86□□□□□ -0.19
COPB1-208ENST00000532088 DNM2P50570 870 aa13.86□□□□□ -0.19
COPB1-208ENST00000532088 ZNF131P52739 623 aa13.86□□□□□ -0.19
COPB1-208ENST00000532088 RBL2Q08999 1139 aa13.86□□□□□ -0.19
COPB1-208ENST00000532088 NFKBIBQ15653 356 aa13.86□□□□□ -0.19
COPB1-208ENST00000532088 FAM47CQ5HY64 1035 aa13.86□□□□□ -0.19
COPB1-208ENST00000532088 SERINC5Q86VE9 423 aa13.86□□□□□ -0.19
COPB1-208ENST00000532088 FAM126BQ8IXS8 530 aa13.86□□□□□ -0.19
COPB1-208ENST00000532088 DIS3LQ8TF46 1054 aaKnown RBP13.86□□□□□ -0.19
COPB1-208ENST00000532088 KCNN1Q92952 543 aa13.86□□□□□ -0.19
COPB1-208ENST00000532088 DNAJC19Q96DA6 116 aa13.86□□□□□ -0.19
COPB1-208ENST00000532088 PAWRQ96IZ0 340 aaKnown RBP13.86□□□□□ -0.19
COPB1-208ENST00000532088 RUSC1Q9BVN2 902 aa13.86□□□□□ -0.19
COPB1-208ENST00000532088 CLSTN2Q9H4D0 955 aa13.86□□□□□ -0.19
COPB1-208ENST00000532088 XPNPEP1Q9NQW7 623 aa13.86□□□□□ -0.19
COPB1-208ENST00000532088 KAT6AQ92794 2004 aa13.86□□□□□ -0.19
COPB1-208ENST00000532088 KIAA0100Q14667 2235 aaKnown RBP13.85□□□□□ -0.19
COPB1-208ENST00000532088 A0A087WWV3 80 aa13.85□□□□□ -0.19
COPB1-208ENST00000532088 PVALEFA0A1B0GWK0 134 aa13.85□□□□□ -0.19
COPB1-208ENST00000532088 TREHO43280 583 aa13.85□□□□□ -0.19
COPB1-208ENST00000532088 CD4P01730 458 aa13.85□□□□□ -0.19
COPB1-208ENST00000532088 ARL2P36404 184 aa13.85□□□□□ -0.19
COPB1-208ENST00000532088 IGBP1P78318 339 aa13.85□□□□□ -0.19
COPB1-208ENST00000532088 POU5F1BQ06416 359 aa13.85□□□□□ -0.19
COPB1-208ENST00000532088 GIT2Q14161 759 aa13.85□□□□□ -0.19
COPB1-208ENST00000532088 MXD4Q14582 209 aaPredicted RBP13.85□□□□□ -0.19
COPB1-208ENST00000532088 POSTNQ15063 836 aa13.85□□□□□ -0.19
COPB1-208ENST00000532088 PTGISQ16647 500 aa13.85□□□□□ -0.19
COPB1-208ENST00000532088 PUS10Q3MIT2 529 aaKnown RBP13.85□□□□□ -0.19
COPB1-208ENST00000532088 EFCAB12Q6NXP0 572 aa13.85□□□□□ -0.19
COPB1-208ENST00000532088 TRMT1LQ7Z2T5 733 aaKnown RBP13.85□□□□□ -0.19
COPB1-208ENST00000532088 RSPH3Q86UC2 560 aa13.85□□□□□ -0.19
COPB1-208ENST00000532088 TNS4Q8IZW8 715 aa13.85□□□□□ -0.19
COPB1-208ENST00000532088 SLC17A8Q8NDX2 589 aa13.85□□□□□ -0.19
COPB1-208ENST00000532088 SPATA20Q8TB22 786 aa13.85□□□□□ -0.19
COPB1-208ENST00000532088 TRAPPC12Q8WVT3 735 aa13.85□□□□□ -0.19
COPB1-208ENST00000532088 PSPC1Q8WXF1 523 aaKnown RBP13.85□□□□□ -0.19
COPB1-208ENST00000532088 HLA-CQ95604 372 aa13.85□□□□□ -0.19
COPB1-208ENST00000532088 SYAP1Q96A49 352 aaPredicted RBP13.85□□□□□ -0.19
COPB1-208ENST00000532088 CTAGE1Q96RT6 745 aa13.85□□□□□ -0.19
COPB1-208ENST00000532088 MAP7D2Q96T17 732 aa13.85□□□□□ -0.19
COPB1-208ENST00000532088 GTPBP4Q9BZE4 634 aaKnown RBP13.85□□□□□ -0.19
COPB1-208ENST00000532088 SEL1LQ9UBV2 794 aa13.85□□□□□ -0.19
COPB1-208ENST00000532088 COL4A3BPQ9Y5P4 624 aa13.85□□□□□ -0.19
COPB1-208ENST00000532088 HIP1RO75146 1068 aa13.84□□□□□ -0.19
COPB1-208ENST00000532088 KRT18P05783 430 aaKnown RBP13.84□□□□□ -0.19
COPB1-208ENST00000532088 MAPTP10636 758 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms