RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 CTSWP56202 376 aa3.83□□□□□ -1.8
CD44-234ENST00000531873 RHDQ02161 417 aa3.83□□□□□ -1.8
CD44-234ENST00000531873 ROM1Q03395 351 aa3.83□□□□□ -1.8
CD44-234ENST00000531873 ADCY2Q08462 1091 aa3.83□□□□□ -1.8
CD44-234ENST00000531873 SLC9A5Q14940 896 aa3.83□□□□□ -1.8
CD44-234ENST00000531873 NOLC1Q14978 699 aaKnown RBP eCLIP3.83□□□□□ -1.8
CD44-234ENST00000531873 NR1I3Q14994 352 aa3.83□□□□□ -1.8
CD44-234ENST00000531873 BRD3Q15059 726 aa3.83□□□□□ -1.8
CD44-234ENST00000531873 KCNMB1Q16558 191 aa3.83□□□□□ -1.8
CD44-234ENST00000531873 CR1LQ2VPA4 569 aa3.83□□□□□ -1.8
CD44-234ENST00000531873 UAP1L1Q3KQV9 507 aa3.83□□□□□ -1.8
CD44-234ENST00000531873 SYDE1Q6ZW31 735 aaPredicted RBP3.83□□□□□ -1.8
CD44-234ENST00000531873 USP45Q70EL2 814 aa3.83□□□□□ -1.8
CD44-234ENST00000531873 PPM1NQ8N819 430 aa3.83□□□□□ -1.8
CD44-234ENST00000531873 PPP1R35Q8TAP8 253 aa3.83□□□□□ -1.8
CD44-234ENST00000531873 E2F7Q96AV8 911 aa3.83□□□□□ -1.8
CD44-234ENST00000531873 TOE1Q96GM8 510 aaKnown RBP3.83□□□□□ -1.8
CD44-234ENST00000531873 FAM193BQ96PV7 902 aaPredicted RBP3.83□□□□□ -1.8
CD44-234ENST00000531873 MTG2Q9H4K7 406 aa3.83□□□□□ -1.8
CD44-234ENST00000531873 INCENPQ9NQS7 918 aa3.83□□□□□ -1.8
CD44-234ENST00000531873 KLHL14Q9P2G3 628 aa3.83□□□□□ -1.8
CD44-234ENST00000531873 EVLQ9UI08 416 aaPredicted RBP3.83□□□□□ -1.8
CD44-234ENST00000531873 SCOCQ9UIL1 159 aa3.83□□□□□ -1.8
CD44-234ENST00000531873 LIMCH1Q9UPQ0 1083 aa3.83□□□□□ -1.8
CD44-234ENST00000531873 FAM50BQ9Y247 325 aa3.83□□□□□ -1.8
CD44-234ENST00000531873 IPPQ9Y573 584 aa3.83□□□□□ -1.8
CD44-234ENST00000531873 CDY2AQ9Y6F7 541 aa3.83□□□□□ -1.8
CD44-234ENST00000531873 COMMD10Q9Y6G5 202 aa3.83□□□□□ -1.8
CD44-234ENST00000531873 MYPNQ86TC9 1320 aa3.83□□□□□ -1.8
CD44-234ENST00000531873 ANO9A1A5B4 782 aa3.82□□□□□ -1.8
CD44-234ENST00000531873 PMM2O15305 246 aa3.82□□□□□ -1.8
CD44-234ENST00000531873 HTRA2O43464 458 aaPredicted RBP3.82□□□□□ -1.8
CD44-234ENST00000531873 CTNND1O60716 968 aaKnown RBP3.82□□□□□ -1.8
CD44-234ENST00000531873 OPHN1O60890 802 aa3.82□□□□□ -1.8
CD44-234ENST00000531873 PCDH8O95206 1070 aa3.82□□□□□ -1.8
CD44-234ENST00000531873 C1QTNF9P0C862 333 aa3.82□□□□□ -1.8
CD44-234ENST00000531873 RAC2P15153 192 aa3.82□□□□□ -1.8
CD44-234ENST00000531873 PDCP20941 246 aa3.82□□□□□ -1.8
CD44-234ENST00000531873 PDE6BP35913 854 aa3.82□□□□□ -1.8
CD44-234ENST00000531873 MAPKAPK2P49137 400 aa3.82□□□□□ -1.8
CD44-234ENST00000531873 CCT2P78371 535 aaKnown RBP3.82□□□□□ -1.8
CD44-234ENST00000531873 CDK17Q00537 523 aa3.82□□□□□ -1.8
CD44-234ENST00000531873 SPIDRQ14159 915 aa3.82□□□□□ -1.8
CD44-234ENST00000531873 RAB3GAP1Q15042 981 aa3.82□□□□□ -1.8
CD44-234ENST00000531873 SAFBQ15424 915 aaKnown RBP eCLIP3.82□□□□□ -1.8
CD44-234ENST00000531873 VPS72Q15906 364 aa3.82□□□□□ -1.8
CD44-234ENST00000531873 ADRM1Q16186 407 aa3.82□□□□□ -1.8
CD44-234ENST00000531873 ANO4Q32M45 955 aa3.82□□□□□ -1.8
CD44-234ENST00000531873 COBLL1Q53SF7 1204 aa3.82□□□□□ -1.8
CD44-234ENST00000531873 ADGRF1Q5T601 910 aa3.82□□□□□ -1.8
CD44-234ENST00000531873 FYB2Q5VWT5 728 aa3.82□□□□□ -1.8
CD44-234ENST00000531873 TIGD7Q6NT04 549 aaPredicted RBP3.82□□□□□ -1.8
CD44-234ENST00000531873 ETV3LQ6ZN32 361 aa3.82□□□□□ -1.8
CD44-234ENST00000531873 GRAMD1CQ8IYS0 662 aa3.82□□□□□ -1.8
CD44-234ENST00000531873 SPICE1Q8N0Z3 855 aa3.82□□□□□ -1.8
CD44-234ENST00000531873 FAM43AQ8N2R8 423 aa3.82□□□□□ -1.8
CD44-234ENST00000531873 FAM26EQ8N5C1 309 aa3.82□□□□□ -1.8
CD44-234ENST00000531873 OR14C36Q8NHC7 312 aa3.82□□□□□ -1.8
CD44-234ENST00000531873 MVB12AQ96EY5 273 aa3.82□□□□□ -1.8
CD44-234ENST00000531873 INTS4Q96HW7 963 aaKnown RBP3.82□□□□□ -1.8
CD44-234ENST00000531873 STRBPQ96SI9 672 aaKnown RBP3.82□□□□□ -1.8
CD44-234ENST00000531873 HAPLN2Q9GZV7 340 aa3.82□□□□□ -1.8
CD44-234ENST00000531873 RNF38Q9H0F5 515 aa3.82□□□□□ -1.8
CD44-234ENST00000531873 MAN1C1Q9NR34 630 aa3.82□□□□□ -1.8
CD44-234ENST00000531873 ARHGAP28Q9P2N2 729 aa3.82□□□□□ -1.8
CD44-234ENST00000531873 USP25Q9UHP3 1055 aa3.82□□□□□ -1.8
CD44-234ENST00000531873 TAGLN3Q9UI15 199 aa3.82□□□□□ -1.8
CD44-234ENST00000531873 KCNG1Q9UIX4 513 aa3.82□□□□□ -1.8
CD44-234ENST00000531873 DBR1Q9UK59 544 aaKnown RBP3.82□□□□□ -1.8
CD44-234ENST00000531873 H3BML4 177 aa3.81□□□□□ -1.8
CD44-234ENST00000531873 TUSC2O75896 110 aa3.81□□□□□ -1.8
CD44-234ENST00000531873 SEC24DO94855 1032 aaPredicted RBP3.81□□□□□ -1.8
CD44-234ENST00000531873 ZBED1O96006 694 aa3.81□□□□□ -1.8
CD44-234ENST00000531873 MPOP05164 745 aa3.81□□□□□ -1.8
CD44-234ENST00000531873 C8BP07358 591 aa3.81□□□□□ -1.8
CD44-234ENST00000531873 SLC5A1P13866 664 aa3.81□□□□□ -1.8
CD44-234ENST00000531873 SERPINB3P29508 390 aa3.81□□□□□ -1.8
CD44-234ENST00000531873 ZNF200P98182 395 aaPredicted RBP3.81□□□□□ -1.8
CD44-234ENST00000531873 PFKPQ01813 784 aa3.81□□□□□ -1.8
CD44-234ENST00000531873 PPARAQ07869 468 aa3.81□□□□□ -1.8
CD44-234ENST00000531873 MALLQ13021 153 aa3.81□□□□□ -1.8
CD44-234ENST00000531873 PGS1Q32NB8 556 aa3.81□□□□□ -1.8
CD44-234ENST00000531873 C3orf36Q3SXR2 165 aa3.81□□□□□ -1.8
CD44-234ENST00000531873 KANK2Q63ZY3 851 aa3.81□□□□□ -1.8
CD44-234ENST00000531873 ZC3H14Q6PJT7 736 aaKnown RBP3.81□□□□□ -1.8
CD44-234ENST00000531873 DBX2Q6ZNG2 339 aa3.81□□□□□ -1.8
CD44-234ENST00000531873 GAREM2Q75VX8 874 aa3.81□□□□□ -1.8
CD44-234ENST00000531873 CDYL2Q8N8U2 506 aa3.81□□□□□ -1.8
CD44-234ENST00000531873 DTX3Q8N9I9 347 aa3.81□□□□□ -1.8
CD44-234ENST00000531873 MARCH10Q8NA82 808 aaPredicted RBP3.81□□□□□ -1.8
CD44-234ENST00000531873 ABHD4Q8TB40 342 aa3.81□□□□□ -1.8
CD44-234ENST00000531873 IGDCC4Q8TDY8 1250 aa3.81□□□□□ -1.8
CD44-234ENST00000531873 RSAD2Q8WXG1 361 aa3.81□□□□□ -1.8
CD44-234ENST00000531873 TTC17Q96AE7 1141 aa3.81□□□□□ -1.8
CD44-234ENST00000531873 LIN37Q96GY3 246 aaPredicted RBP3.81□□□□□ -1.8
CD44-234ENST00000531873 C20orf173Q96LM9 149 aa3.81□□□□□ -1.8
CD44-234ENST00000531873 MAP3K14Q99558 947 aa3.81□□□□□ -1.8
CD44-234ENST00000531873 FDXACB1Q9BRP7 624 aaPredicted RBP3.81□□□□□ -1.8
CD44-234ENST00000531873 LRFN3Q9BTN0 628 aa3.81□□□□□ -1.8
CD44-234ENST00000531873 ACE2Q9BYF1 805 aaPredicted RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms