RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 BTBD2Q9BX70 525 aa5.86□□□□□ -1.47
USP47-211ENST00000531513 ASPSCR1Q9BZE9 553 aa5.86□□□□□ -1.47
USP47-211ENST00000531513 SLC5A4Q9NY91 659 aa5.86□□□□□ -1.47
USP47-211ENST00000531513 PCDHA9Q9Y5H5 950 aa5.86□□□□□ -1.47
USP47-211ENST00000531513 LOC102724159A0A0B4J2E5 919 aa5.85□□□□□ -1.47
USP47-211ENST00000531513 KIF3BO15066 747 aa5.85□□□□□ -1.47
USP47-211ENST00000531513 GPR39O43194 453 aa5.85□□□□□ -1.47
USP47-211ENST00000531513 BRINP1O60477 761 aa5.85□□□□□ -1.47
USP47-211ENST00000531513 FLT3P36888 993 aa5.85□□□□□ -1.47
USP47-211ENST00000531513 MEOX1P50221 254 aa5.85□□□□□ -1.47
USP47-211ENST00000531513 HERVK_113P62684 666 aa5.85□□□□□ -1.47
USP47-211ENST00000531513 LACTBP83111 547 aaPredicted RBP5.85□□□□□ -1.47
USP47-211ENST00000531513 HGFACQ04756 655 aa5.85□□□□□ -1.47
USP47-211ENST00000531513 MCL1Q07820 350 aa5.85□□□□□ -1.47
USP47-211ENST00000531513 ZNF460Q14592 562 aa5.85□□□□□ -1.47
USP47-211ENST00000531513 STAT4Q14765 748 aa5.85□□□□□ -1.47
USP47-211ENST00000531513 PPP2R5AQ15172 486 aa5.85□□□□□ -1.47
USP47-211ENST00000531513 PWP2Q15269 919 aaKnown RBP5.85□□□□□ -1.47
USP47-211ENST00000531513 SEC23AQ15436 765 aa5.85□□□□□ -1.47
USP47-211ENST00000531513 TMEM200BQ69YZ2 307 aa5.85□□□□□ -1.47
USP47-211ENST00000531513 RTKN2Q8IZC4 609 aa5.85□□□□□ -1.47
USP47-211ENST00000531513 LARP4BQ92615 738 aaKnown RBP5.85□□□□□ -1.47
USP47-211ENST00000531513 TMEM176AQ96HP8 235 aa5.85□□□□□ -1.47
USP47-211ENST00000531513 MAGEB10Q96LZ2 347 aaPredicted RBP5.85□□□□□ -1.47
USP47-211ENST00000531513 NELFAQ9H3P2 528 aa5.85□□□□□ -1.47
USP47-211ENST00000531513 SMURF1Q9HCE7 757 aa5.85□□□□□ -1.47
USP47-211ENST00000531513 UCKL1Q9NWZ5 548 aa5.85□□□□□ -1.47
USP47-211ENST00000531513 CEP72Q9P209 647 aa5.85□□□□□ -1.47
USP47-211ENST00000531513 HECAQ9UBI9 543 aaPredicted RBP5.85□□□□□ -1.47
USP47-211ENST00000531513 A0A0G2JNJ9 132 aa5.84□□□□□ -1.47
USP47-211ENST00000531513 CCDC66A2RUB6 948 aa5.84□□□□□ -1.47
USP47-211ENST00000531513 PEX14O75381 377 aa5.84□□□□□ -1.47
USP47-211ENST00000531513 MMEP08473 750 aa5.84□□□□□ -1.47
USP47-211ENST00000531513 SRGAP2CP0DJJ0 459 aa5.84□□□□□ -1.47
USP47-211ENST00000531513 IGFALSP35858 605 aa5.84□□□□□ -1.47
USP47-211ENST00000531513 ECE1P42892 770 aa5.84□□□□□ -1.47
USP47-211ENST00000531513 ST5P78524 1137 aa5.84□□□□□ -1.47
USP47-211ENST00000531513 GRM7Q14831 915 aa5.84□□□□□ -1.47
USP47-211ENST00000531513 SEPT7Q16181 437 aaKnown RBP5.84□□□□□ -1.47
USP47-211ENST00000531513 KRTAP15-1Q3LI76 137 aa5.84□□□□□ -1.47
USP47-211ENST00000531513 CFAP100Q494V2 611 aa5.84□□□□□ -1.47
USP47-211ENST00000531513 LHFPL2Q6ZUX7 228 aa5.84□□□□□ -1.47
USP47-211ENST00000531513 UBE2R2Q712K3 238 aaPredicted RBP5.84□□□□□ -1.47
USP47-211ENST00000531513 SGMS1Q86VZ5 419 aa5.84□□□□□ -1.47
USP47-211ENST00000531513 ZNF575Q86XF7 245 aa5.84□□□□□ -1.47
USP47-211ENST00000531513 WDR75Q8IWA0 830 aaKnown RBP5.84□□□□□ -1.47
USP47-211ENST00000531513 PCGF6Q9BYE7 350 aa5.84□□□□□ -1.47
USP47-211ENST00000531513 OR10A5Q9H207 317 aa5.84□□□□□ -1.47
USP47-211ENST00000531513 ZNF703Q9H7S9 590 aaPredicted RBP5.84□□□□□ -1.47
USP47-211ENST00000531513 AURKAIP1Q9NWT8 199 aaPredicted RBP5.84□□□□□ -1.47
USP47-211ENST00000531513 Q9UFV3 132 aa5.84□□□□□ -1.47
USP47-211ENST00000531513 TCRBV16S1A1N1A0A5B0 115 aa5.83□□□□□ -1.48
USP47-211ENST00000531513 CAPN14A8MX76 684 aa5.83□□□□□ -1.48
USP47-211ENST00000531513 B4E1Z4 1266 aa5.83□□□□□ -1.48
USP47-211ENST00000531513 GSTA4O15217 222 aa5.83□□□□□ -1.48
USP47-211ENST00000531513 SLC26A4O43511 780 aa5.83□□□□□ -1.48
USP47-211ENST00000531513 KPNA6O60684 536 aa5.83□□□□□ -1.48
USP47-211ENST00000531513 CLASP2O75122 1294 aaKnown RBP5.83□□□□□ -1.48
USP47-211ENST00000531513 JMJD7P0C870 316 aa5.83□□□□□ -1.48
USP47-211ENST00000531513 MAKP20794 623 aa5.83□□□□□ -1.48
USP47-211ENST00000531513 STAT5BP51692 787 aa5.83□□□□□ -1.48
USP47-211ENST00000531513 NEK2P51955 445 aa5.83□□□□□ -1.48
USP47-211ENST00000531513 NANOS3P60323 173 aaKnown RBP5.83□□□□□ -1.48
USP47-211ENST00000531513 HHEXQ03014 270 aa5.83□□□□□ -1.48
USP47-211ENST00000531513 MTMR1Q13613 665 aa5.83□□□□□ -1.48
USP47-211ENST00000531513 MOGSQ13724 837 aa5.83□□□□□ -1.48
USP47-211ENST00000531513 CRY1Q16526 586 aa5.83□□□□□ -1.48
USP47-211ENST00000531513 FAM47CQ5HY64 1035 aa5.83□□□□□ -1.48
USP47-211ENST00000531513 CDCA2Q69YH5 1023 aaPredicted RBP5.83□□□□□ -1.48
USP47-211ENST00000531513 ADGRE4PQ86SQ3 457 aa5.83□□□□□ -1.48
USP47-211ENST00000531513 D2HGDHQ8N465 521 aa5.83□□□□□ -1.48
USP47-211ENST00000531513 SHCBP1Q8NEM2 672 aa5.83□□□□□ -1.48
USP47-211ENST00000531513 PUS7LQ9H0K6 701 aaKnown RBP5.83□□□□□ -1.48
USP47-211ENST00000531513 MYH16Q9H6N6 1097 aa5.83□□□□□ -1.48
USP47-211ENST00000531513 AGO3Q9H9G7 860 aaKnown RBP5.83□□□□□ -1.48
USP47-211ENST00000531513 FAM184BQ9ULE4 1060 aa5.83□□□□□ -1.48
USP47-211ENST00000531513 GIT1Q9Y2X7 761 aa5.83□□□□□ -1.48
USP47-211ENST00000531513 SHTN1A0MZ66 631 aa5.82□□□□□ -1.48
USP47-211ENST00000531513 ZEB2O60315 1214 aa5.82□□□□□ -1.48
USP47-211ENST00000531513 DNM2P50570 870 aa5.82□□□□□ -1.48
USP47-211ENST00000531513 RAB27AP51159 221 aa5.82□□□□□ -1.48
USP47-211ENST00000531513 ITKQ08881 620 aa5.82□□□□□ -1.48
USP47-211ENST00000531513 LRRC41Q15345 812 aa5.82□□□□□ -1.48
USP47-211ENST00000531513 FSTL4Q6MZW2 842 aa5.82□□□□□ -1.48
USP47-211ENST00000531513 ZNF627Q7L945 461 aa5.82□□□□□ -1.48
USP47-211ENST00000531513 SPATS2Q86XZ4 545 aaKnown RBP5.82□□□□□ -1.48
USP47-211ENST00000531513 ZC3H7AQ8IWR0 971 aaKnown RBP5.82□□□□□ -1.48
USP47-211ENST00000531513 WDR48Q8TAF3 677 aa5.82□□□□□ -1.48
USP47-211ENST00000531513 USP7Q93009 1102 aa5.82□□□□□ -1.48
USP47-211ENST00000531513 TTC1Q99614 292 aa5.82□□□□□ -1.48
USP47-211ENST00000531513 CELF4Q9BZC1 486 aaKnown RBP5.82□□□□□ -1.48
USP47-211ENST00000531513 CCDC8Q9H0W5 538 aaPredicted RBP5.82□□□□□ -1.48
USP47-211ENST00000531513 KRTAP23-1A1A580 65 aa5.81□□□□□ -1.48
USP47-211ENST00000531513 AKAP10O43572 662 aa5.81□□□□□ -1.48
USP47-211ENST00000531513 BPIP17213 487 aa5.81□□□□□ -1.48
USP47-211ENST00000531513 KCNA6P17658 529 aa5.81□□□□□ -1.48
USP47-211ENST00000531513 RIN1Q13671 783 aa5.81□□□□□ -1.48
USP47-211ENST00000531513 SPTY2D1Q68D10 685 aaPredicted RBP5.81□□□□□ -1.48
USP47-211ENST00000531513 GRAMD4Q6IC98 578 aa5.81□□□□□ -1.48
USP47-211ENST00000531513 PCSK4Q6UW60 755 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms