RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 ZNF697Q5TEC3 545 aa15.53■□□□□ 0.08
USF1-209ENST00000529476 SV2BQ7L1I2 683 aa15.53■□□□□ 0.08
USF1-209ENST00000529476 DEFB128Q7Z7B8 93 aa15.53■□□□□ 0.08
USF1-209ENST00000529476 NLRP7Q8WX94 980 aa15.53■□□□□ 0.08
USF1-209ENST00000529476 STAMQ92783 540 aa15.53■□□□□ 0.08
USF1-209ENST00000529476 NLRP4Q96MN2 994 aa15.53■□□□□ 0.08
USF1-209ENST00000529476 SCLT1Q96NL6 688 aa15.53■□□□□ 0.08
USF1-209ENST00000529476 OSMRQ99650 979 aa15.53■□□□□ 0.08
USF1-209ENST00000529476 LBHD1Q9BQE6 289 aaPredicted RBP15.53■□□□□ 0.08
USF1-209ENST00000529476 CUEDC2Q9H467 287 aa15.53■□□□□ 0.08
USF1-209ENST00000529476 KCND2Q9NZV8 630 aa15.53■□□□□ 0.08
USF1-209ENST00000529476 SERTAD1Q9UHV2 236 aa15.53■□□□□ 0.08
USF1-209ENST00000529476 TET1Q8NFU7 2136 aa15.53■□□□□ 0.08
USF1-209ENST00000529476 LAMA2P24043 3122 aaKnown RBP15.52■□□□□ 0.08
USF1-209ENST00000529476 PRUNE2Q8WUY3 3088 aa15.52■□□□□ 0.08
USF1-209ENST00000529476 A0A087WZ62 844 aa15.52■□□□□ 0.08
USF1-209ENST00000529476 MYMKA6NI61 221 aa15.52■□□□□ 0.08
USF1-209ENST00000529476 ACTN4O43707 911 aaKnown RBP15.52■□□□□ 0.08
USF1-209ENST00000529476 PRPF40AO75400 957 aaKnown RBP15.52■□□□□ 0.08
USF1-209ENST00000529476 KRT18P05783 430 aaKnown RBP15.52■□□□□ 0.08
USF1-209ENST00000529476 SRGAP2CP0DJJ0 459 aa15.52■□□□□ 0.08
USF1-209ENST00000529476 GHRP10912 638 aa15.52■□□□□ 0.08
USF1-209ENST00000529476 CRYBB1P53674 252 aaPredicted RBP15.52■□□□□ 0.08
USF1-209ENST00000529476 FPGSQ05932 587 aa15.52■□□□□ 0.08
USF1-209ENST00000529476 CAPSQ13938 189 aa15.52■□□□□ 0.08
USF1-209ENST00000529476 LPIN1Q14693 890 aa15.52■□□□□ 0.08
USF1-209ENST00000529476 LONRF3Q496Y0 759 aa15.52■□□□□ 0.08
USF1-209ENST00000529476 FBXO47Q5MNV8 452 aa15.52■□□□□ 0.08
USF1-209ENST00000529476 DAW1Q8N136 415 aa15.52■□□□□ 0.08
USF1-209ENST00000529476 TMEM40Q8WWA1 233 aa15.52■□□□□ 0.08
USF1-209ENST00000529476 BSNDQ8WZ55 320 aa15.52■□□□□ 0.08
USF1-209ENST00000529476 VWCEQ96DN2 955 aa15.52■□□□□ 0.08
USF1-209ENST00000529476 GBP4Q96PP9 640 aa15.52■□□□□ 0.08
USF1-209ENST00000529476 REEP2Q9BRK0 252 aa15.52■□□□□ 0.08
USF1-209ENST00000529476 FDXACB1Q9BRP7 624 aaPredicted RBP15.52■□□□□ 0.08
USF1-209ENST00000529476 PYM1Q9BRP8 204 aaKnown RBP15.52■□□□□ 0.08
USF1-209ENST00000529476 SFI1A8K8P3 1242 aa15.51■□□□□ 0.07
USF1-209ENST00000529476 ASAP2O43150 1006 aa15.51■□□□□ 0.07
USF1-209ENST00000529476 SLFN14P0C7P3 912 aa15.51■□□□□ 0.07
USF1-209ENST00000529476 ACRP10323 421 aa15.51■□□□□ 0.07
USF1-209ENST00000529476 RFC2P35250 354 aa15.51■□□□□ 0.07
USF1-209ENST00000529476 EPHB4P54760 987 aa15.51■□□□□ 0.07
USF1-209ENST00000529476 PPIGQ13427 754 aaKnown RBP eCLIP15.51■□□□□ 0.073e-7■■■■□ 19.5
USF1-209ENST00000529476 GIT2Q14161 759 aa15.51■□□□□ 0.07
USF1-209ENST00000529476 MXD4Q14582 209 aaPredicted RBP15.51■□□□□ 0.07
USF1-209ENST00000529476 DYMQ7RTS9 669 aa15.51■□□□□ 0.07
USF1-209ENST00000529476 CEP57L1Q8IYX8 460 aa15.51■□□□□ 0.07
USF1-209ENST00000529476 RNF149Q8NC42 400 aa15.51■□□□□ 0.07
USF1-209ENST00000529476 DDX12PQ92771 950 aa15.51■□□□□ 0.07
USF1-209ENST00000529476 KIFAP3Q92845 792 aa15.51■□□□□ 0.07
USF1-209ENST00000529476 DRC1Q96MC2 740 aa15.51■□□□□ 0.07
USF1-209ENST00000529476 TIPINQ9BVW5 301 aa15.51■□□□□ 0.07
USF1-209ENST00000529476 TNMDQ9H2S6 317 aa15.51■□□□□ 0.07
USF1-209ENST00000529476 SEMA6BQ9H3T3 888 aa15.51■□□□□ 0.07
USF1-209ENST00000529476 KBTBD4Q9NVX7 518 aa15.51■□□□□ 0.07
USF1-209ENST00000529476 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.5■□□□□ 0.07
USF1-209ENST00000529476 CSDE1O75534 798 aaKnown RBP15.5■□□□□ 0.07
USF1-209ENST00000529476 ZNF202O95125 648 aa15.5■□□□□ 0.07
USF1-209ENST00000529476 PARNO95453 639 aaKnown RBP15.5■□□□□ 0.07
USF1-209ENST00000529476 CXCL10P02778 98 aa15.5■□□□□ 0.07
USF1-209ENST00000529476 DARSP14868 501 aaKnown RBP15.5■□□□□ 0.07
USF1-209ENST00000529476 LIG1P18858 919 aa15.5■□□□□ 0.07
USF1-209ENST00000529476 CDC42EP1Q00587 391 aa15.5■□□□□ 0.07
USF1-209ENST00000529476 TFDP1Q14186 410 aa15.5■□□□□ 0.07
USF1-209ENST00000529476 C16orf59Q7L2K0 433 aa15.5■□□□□ 0.07
USF1-209ENST00000529476 ZNF410Q86VK4 478 aa15.5■□□□□ 0.07
USF1-209ENST00000529476 GRAMD1CQ8IYS0 662 aa15.5■□□□□ 0.07
USF1-209ENST00000529476 FMR1NBQ8N0W7 255 aaPredicted RBP15.5■□□□□ 0.07
USF1-209ENST00000529476 ZNF710Q8N1W2 664 aa15.5■□□□□ 0.07
USF1-209ENST00000529476 ENGASEQ8NFI3 743 aa15.5■□□□□ 0.07
USF1-209ENST00000529476 AGO3Q9H9G7 860 aaKnown RBP15.5■□□□□ 0.07
USF1-209ENST00000529476 MAGEF1Q9HAY2 307 aa15.5■□□□□ 0.07
USF1-209ENST00000529476 IFT122Q9HBG6 1241 aa15.5■□□□□ 0.07
USF1-209ENST00000529476 IL23AQ9NPF7 189 aa15.5■□□□□ 0.07
USF1-209ENST00000529476 USP25Q9UHP3 1055 aa15.5■□□□□ 0.07
USF1-209ENST00000529476 NOC2LQ9Y3T9 749 aaKnown RBP15.5■□□□□ 0.07
USF1-209ENST00000529476 TTC28Q96AY4 2481 aa15.5■□□□□ 0.07
USF1-209ENST00000529476 LRRIQ4A6NIV6 560 aa15.49■□□□□ 0.07
USF1-209ENST00000529476 FGFR4P22455 802 aa15.49■□□□□ 0.07
USF1-209ENST00000529476 EIF4BP23588 611 aaKnown RBP15.49■□□□□ 0.07
USF1-209ENST00000529476 CASP1P29466 404 aa15.49■□□□□ 0.07
USF1-209ENST00000529476 CD52P31358 61 aa15.49■□□□□ 0.07
USF1-209ENST00000529476 AFMP43652 599 aa15.49■□□□□ 0.07
USF1-209ENST00000529476 UBE2HP62256 183 aa15.49■□□□□ 0.07
USF1-209ENST00000529476 FAM160A1Q05DH4 1040 aa15.49■□□□□ 0.07
USF1-209ENST00000529476 SNW1Q13573 536 aaKnown RBP15.49■□□□□ 0.07
USF1-209ENST00000529476 TCTN1Q2MV58 587 aa15.49■□□□□ 0.07
USF1-209ENST00000529476 KRBA2Q6ZNG9 492 aa15.49■□□□□ 0.07
USF1-209ENST00000529476 TSHZ1Q6ZSZ6 1077 aa15.49■□□□□ 0.07
USF1-209ENST00000529476 RPUSD2Q8IZ73 545 aaKnown RBP15.49■□□□□ 0.07
USF1-209ENST00000529476 MYLIPQ8WY64 445 aa15.49■□□□□ 0.07
USF1-209ENST00000529476 DNAJC19Q96DA6 116 aa15.49■□□□□ 0.07
USF1-209ENST00000529476 PAGE5Q96GU1 130 aa15.49■□□□□ 0.07
USF1-209ENST00000529476 IFT74Q96LB3 600 aa15.49■□□□□ 0.07
USF1-209ENST00000529476 GCOM2Q9BZD3 368 aaPredicted RBP15.49■□□□□ 0.07
USF1-209ENST00000529476 ZHX3Q9H4I2 956 aa15.49■□□□□ 0.07
USF1-209ENST00000529476 ODF2LQ9ULJ1 636 aa15.49■□□□□ 0.07
USF1-209ENST00000529476 SQORQ9Y6N5 450 aa15.49■□□□□ 0.07
USF1-209ENST00000529476 TBCAO75347 108 aaKnown RBP15.48■□□□□ 0.07
USF1-209ENST00000529476 NR1I2O75469 434 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms