RNA–Protein interactions for RNA: ENST00000528922.1

CD44-230, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 1,319 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-230ENST00000528922 C14orf119Q9NWQ9 140 aa6.49□□□□□ -1.37
CD44-230ENST00000528922 KCMF1Q9P0J7 381 aa6.49□□□□□ -1.37
CD44-230ENST00000528922 PTPN22Q9Y2R2 807 aa6.49□□□□□ -1.37
CD44-230ENST00000528922 MYPNQ86TC9 1320 aa6.48□□□□□ -1.37
CD44-230ENST00000528922 WASHC2CQ9Y4E1 1318 aa6.48□□□□□ -1.37
CD44-230ENST00000528922 CCDC18Q5T9S5 1454 aa6.48□□□□□ -1.37
CD44-230ENST00000528922 A0A0A6YYJ9 748 aa6.48□□□□□ -1.37
CD44-230ENST00000528922 GOLGA8AA7E2F4 631 aa6.48□□□□□ -1.37
CD44-230ENST00000528922 GOLGA8BA8MQT2 603 aa6.48□□□□□ -1.37
CD44-230ENST00000528922 K7ESF4 209 aa6.48□□□□□ -1.37
CD44-230ENST00000528922 CUTAO60888 179 aa6.48□□□□□ -1.37
CD44-230ENST00000528922 PCDH8O95206 1070 aa6.48□□□□□ -1.37
CD44-230ENST00000528922 PFKMP08237 780 aa6.48□□□□□ -1.37
CD44-230ENST00000528922 ZNF888P0CJ79 500 aaPredicted RBP6.48□□□□□ -1.37
CD44-230ENST00000528922 STAT5BP51692 787 aa6.48□□□□□ -1.37
CD44-230ENST00000528922 ANAPC15P60006 121 aa6.48□□□□□ -1.37
CD44-230ENST00000528922 IGBP1P78318 339 aa6.48□□□□□ -1.37
CD44-230ENST00000528922 FAPQ12884 760 aa6.48□□□□□ -1.37
CD44-230ENST00000528922 MTMR1Q13613 665 aa6.48□□□□□ -1.37
CD44-230ENST00000528922 KRTAP19-4Q3LI73 84 aa6.48□□□□□ -1.37
CD44-230ENST00000528922 CT83Q5H943 113 aa6.48□□□□□ -1.37
CD44-230ENST00000528922 ERICH6BQ5W0A0 696 aa6.48□□□□□ -1.37
CD44-230ENST00000528922 TRIM68Q6AZZ1 485 aa6.48□□□□□ -1.37
CD44-230ENST00000528922 GPR155Q7Z3F1 870 aa6.48□□□□□ -1.37
CD44-230ENST00000528922 SP8Q8IXZ3 490 aa6.48□□□□□ -1.37
CD44-230ENST00000528922 OR5AN1Q8NGI8 311 aa6.48□□□□□ -1.37
CD44-230ENST00000528922 RPGRQ92834 1020 aaKnown RBP6.48□□□□□ -1.37
CD44-230ENST00000528922 FERMT2Q96AC1 680 aa6.48□□□□□ -1.37
CD44-230ENST00000528922 KRTAP9-9Q9BYP9 154 aa6.48□□□□□ -1.37
CD44-230ENST00000528922 KRTAP9-4Q9BYQ2 154 aa6.48□□□□□ -1.37
CD44-230ENST00000528922 HAPLN2Q9GZV7 340 aa6.48□□□□□ -1.37
CD44-230ENST00000528922 CCDC8Q9H0W5 538 aaPredicted RBP6.48□□□□□ -1.37
CD44-230ENST00000528922 BARX1Q9HBU1 254 aaPredicted RBP6.48□□□□□ -1.37
CD44-230ENST00000528922 SUPT6HQ7KZ85 1726 aaKnown RBP6.47□□□□□ -1.37
CD44-230ENST00000528922 TARBP1Q13395 1621 aaKnown RBP6.47□□□□□ -1.37
CD44-230ENST00000528922 TONSLQ96HA7 1378 aa6.47□□□□□ -1.37
CD44-230ENST00000528922 MAPKBP1O60336 1514 aa6.47□□□□□ -1.37
CD44-230ENST00000528922 TOPBP1Q92547 1522 aa6.47□□□□□ -1.37
CD44-230ENST00000528922 ALG1L2C9J202 215 aa6.47□□□□□ -1.37
CD44-230ENST00000528922 OPHN1O60890 802 aa6.47□□□□□ -1.37
CD44-230ENST00000528922 HMGCRP04035 888 aa6.47□□□□□ -1.37
CD44-230ENST00000528922 GJA9P57773 515 aa6.47□□□□□ -1.37
CD44-230ENST00000528922 MAP3K12Q12852 859 aa6.47□□□□□ -1.37
CD44-230ENST00000528922 DGKDQ16760 1214 aa6.47□□□□□ -1.37
CD44-230ENST00000528922 PITRM1Q5JRX3 1037 aa6.47□□□□□ -1.37
CD44-230ENST00000528922 CCDC62Q6P9F0 684 aa6.47□□□□□ -1.37
CD44-230ENST00000528922 BMP8AQ7Z5Y6 402 aa6.47□□□□□ -1.37
CD44-230ENST00000528922 REXO1L1PQ8IX06 675 aa6.47□□□□□ -1.37
CD44-230ENST00000528922 TGFBRAP1Q8WUH2 860 aa6.47□□□□□ -1.37
CD44-230ENST00000528922 EAF2Q96CJ1 260 aaPredicted RBP6.47□□□□□ -1.37
CD44-230ENST00000528922 CARD11Q9BXL7 1154 aa6.47□□□□□ -1.37
CD44-230ENST00000528922 KCNG1Q9UIX4 513 aa6.47□□□□□ -1.37
CD44-230ENST00000528922 MTUS2Q5JR59 1369 aa6.46□□□□□ -1.38
CD44-230ENST00000528922 AKNAQ7Z591 1439 aa6.46□□□□□ -1.38
CD44-230ENST00000528922 UACAQ9BZF9 1416 aa6.46□□□□□ -1.38
CD44-230ENST00000528922 B4GALT3O60512 393 aa6.46□□□□□ -1.38
CD44-230ENST00000528922 CELA3BP08861 270 aa6.46□□□□□ -1.38
CD44-230ENST00000528922 GPR3P46089 330 aa6.46□□□□□ -1.38
CD44-230ENST00000528922 KIAA2012Q0VF49 1180 aa6.46□□□□□ -1.38
CD44-230ENST00000528922 TRIM25Q14258 630 aaKnown RBP6.46□□□□□ -1.38
CD44-230ENST00000528922 FSCN1Q16658 493 aaKnown RBP6.46□□□□□ -1.38
CD44-230ENST00000528922 SLC41A1Q8IVJ1 513 aa6.46□□□□□ -1.38
CD44-230ENST00000528922 KBTBD2Q8IY47 623 aa6.46□□□□□ -1.38
CD44-230ENST00000528922 IFNL2Q8IZJ0 200 aa6.46□□□□□ -1.38
CD44-230ENST00000528922 ZDHHC14Q8IZN3 488 aa6.46□□□□□ -1.38
CD44-230ENST00000528922 CBARPQ8N350 705 aaPredicted RBP6.46□□□□□ -1.38
CD44-230ENST00000528922 STAG1Q8WVM7 1258 aa6.46□□□□□ -1.38
CD44-230ENST00000528922 MENTQ9BUN1 341 aa6.46□□□□□ -1.38
CD44-230ENST00000528922 XYLT2Q9H1B5 865 aa6.46□□□□□ -1.38
CD44-230ENST00000528922 HOMER2Q9NSB8 354 aa6.46□□□□□ -1.38
CD44-230ENST00000528922 SAE1Q9UBE0 346 aaPredicted RBP6.46□□□□□ -1.38
CD44-230ENST00000528922 NUMBLQ9Y6R0 609 aa6.46□□□□□ -1.38
CD44-230ENST00000528922 DUSP10Q9Y6W6 482 aa6.46□□□□□ -1.38
CD44-230ENST00000528922 ADAMTS20P59510 1910 aa6.46□□□□□ -1.38
CD44-230ENST00000528922 EHBP1L1Q8N3D4 1523 aa6.45□□□□□ -1.38
CD44-230ENST00000528922 MED1Q15648 1581 aaPredicted RBP6.45□□□□□ -1.38
CD44-230ENST00000528922 HFM1A2PYH4 1435 aa6.45□□□□□ -1.38
CD44-230ENST00000528922 A0A0A6YYK5 440 aaPredicted RBP6.45□□□□□ -1.38
CD44-230ENST00000528922 OTOL1A6NHN0 477 aaPredicted RBP6.45□□□□□ -1.38
CD44-230ENST00000528922 SASH1O94885 1247 aa6.45□□□□□ -1.38
CD44-230ENST00000528922 LPLP06858 475 aa6.45□□□□□ -1.38
CD44-230ENST00000528922 ENPP1P22413 925 aa6.45□□□□□ -1.38
CD44-230ENST00000528922 RRADP55042 308 aa6.45□□□□□ -1.38
CD44-230ENST00000528922 ITKQ08881 620 aa6.45□□□□□ -1.38
CD44-230ENST00000528922 USP10Q14694 798 aaKnown RBP6.45□□□□□ -1.38
CD44-230ENST00000528922 PCOLCEQ15113 449 aa6.45□□□□□ -1.38
CD44-230ENST00000528922 ZNF827Q17R98 1081 aa6.45□□□□□ -1.38
CD44-230ENST00000528922 INAVAQ3KP66 663 aa6.45□□□□□ -1.38
CD44-230ENST00000528922 BRDTQ58F21 947 aaPredicted RBP6.45□□□□□ -1.38
CD44-230ENST00000528922 SPOCD1Q6ZMY3 1216 aa6.45□□□□□ -1.38
CD44-230ENST00000528922 FAM124AQ86V42 546 aa6.45□□□□□ -1.38
CD44-230ENST00000528922 NKD2Q969F2 451 aaPredicted RBP6.45□□□□□ -1.38
CD44-230ENST00000528922 DYDC2Q96IM9 177 aa6.45□□□□□ -1.38
CD44-230ENST00000528922 ACAP3Q96P50 834 aa6.45□□□□□ -1.38
CD44-230ENST00000528922 ORAI2Q96SN7 254 aa6.45□□□□□ -1.38
CD44-230ENST00000528922 NOL10Q9BSC4 688 aaKnown RBP6.45□□□□□ -1.38
CD44-230ENST00000528922 SOX7Q9BT81 388 aa6.45□□□□□ -1.38
CD44-230ENST00000528922 KIAA1683Q9H0B3 1180 aa6.45□□□□□ -1.38
CD44-230ENST00000528922 WNT8AQ9H1J5 351 aa6.45□□□□□ -1.38
CD44-230ENST00000528922 ZCCHC4Q9H5U6 513 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms