RNA–Protein interactions for RNA: ENST00000528865.5

CSTF3-208, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 5

Gene CSTF3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-208ENST00000528865 RIT2Q99578 217 aa9.09□□□□□ -0.95
CSTF3-208ENST00000528865 AGPAT1Q99943 283 aa9.09□□□□□ -0.95
CSTF3-208ENST00000528865 AP1M1Q9BXS5 423 aa9.09□□□□□ -0.95
CSTF3-208ENST00000528865 DDX47Q9H0S4 455 aaKnown RBP9.09□□□□□ -0.95
CSTF3-208ENST00000528865 GOLPH3Q9H4A6 298 aa9.09□□□□□ -0.95
CSTF3-208ENST00000528865 EHMT1Q9H9B1 1298 aa9.09□□□□□ -0.95
CSTF3-208ENST00000528865 DBNDD1Q9H9R9 158 aa9.09□□□□□ -0.95
CSTF3-208ENST00000528865 APEX2Q9UBZ4 518 aa9.09□□□□□ -0.95
CSTF3-208ENST00000528865 HERC5Q9UII4 1024 aaKnown RBP9.09□□□□□ -0.95
CSTF3-208ENST00000528865 PPP1R9AQ9ULJ8 1098 aa9.09□□□□□ -0.95
CSTF3-208ENST00000528865 FRMD4BQ9Y2L6 1034 aa9.09□□□□□ -0.95
CSTF3-208ENST00000528865 MRPL11Q9Y3B7 192 aaKnown RBP9.09□□□□□ -0.95
CSTF3-208ENST00000528865 ADAMTSL1Q8N6G6 1762 aa9.09□□□□□ -0.95
CSTF3-208ENST00000528865 PFASO15067 1338 aa9.08□□□□□ -0.96
CSTF3-208ENST00000528865 C5orf60A6NFR6 353 aa9.08□□□□□ -0.96
CSTF3-208ENST00000528865 GOLGA6L10A6NI86 522 aa9.08□□□□□ -0.96
CSTF3-208ENST00000528865 MYO1FO00160 1098 aa9.08□□□□□ -0.96
CSTF3-208ENST00000528865 NDUFAB1O14561 156 aa9.08□□□□□ -0.96
CSTF3-208ENST00000528865 MEFVO15553 781 aaPredicted RBP9.08□□□□□ -0.96
CSTF3-208ENST00000528865 DAPK3O43293 454 aa9.08□□□□□ -0.96
CSTF3-208ENST00000528865 RAD21O60216 631 aa9.08□□□□□ -0.96
CSTF3-208ENST00000528865 ECE2O60344 883 aa9.08□□□□□ -0.96
CSTF3-208ENST00000528865 FSBPO95073 299 aa9.08□□□□□ -0.96
CSTF3-208ENST00000528865 LYPLA2O95372 231 aa9.08□□□□□ -0.96
CSTF3-208ENST00000528865 GGPS1O95749 300 aa9.08□□□□□ -0.96
CSTF3-208ENST00000528865 FAM107AO95990 144 aa9.08□□□□□ -0.96
CSTF3-208ENST00000528865 BCRP11274 1271 aa9.08□□□□□ -0.96
CSTF3-208ENST00000528865 HSPA6P17066 643 aa9.08□□□□□ -0.96
CSTF3-208ENST00000528865 PTGIRP43119 386 aa9.08□□□□□ -0.96
CSTF3-208ENST00000528865 ATP1A2P50993 1020 aa9.08□□□□□ -0.96
CSTF3-208ENST00000528865 EIF3BP55884 814 aaKnown RBP9.08□□□□□ -0.96
CSTF3-208ENST00000528865 SETQ01105 290 aaPredicted RBP9.08□□□□□ -0.96
CSTF3-208ENST00000528865 GHRHRQ02643 423 aa9.08□□□□□ -0.96
CSTF3-208ENST00000528865 HLTFQ14527 1009 aaKnown RBP eCLIP9.08□□□□□ -0.96
CSTF3-208ENST00000528865 COG2Q14746 738 aa9.08□□□□□ -0.96
CSTF3-208ENST00000528865 CBWD6Q4V339 395 aa9.08□□□□□ -0.96
CSTF3-208ENST00000528865 CBWD3Q5JTY5 395 aa9.08□□□□□ -0.96
CSTF3-208ENST00000528865 KIAA1755Q5JYT7 1200 aa9.08□□□□□ -0.96
CSTF3-208ENST00000528865 CBWD5Q5RIA9 395 aa9.08□□□□□ -0.96
CSTF3-208ENST00000528865 NAA35Q5VZE5 725 aa9.08□□□□□ -0.96
CSTF3-208ENST00000528865 TTC19Q6DKK2 380 aaPredicted RBP9.08□□□□□ -0.96
CSTF3-208ENST00000528865 PHLDB3Q6NSJ2 640 aa9.08□□□□□ -0.96
CSTF3-208ENST00000528865 C11orf63Q6NUN7 778 aa9.08□□□□□ -0.96
CSTF3-208ENST00000528865 NIPA1Q7RTP0 329 aa9.08□□□□□ -0.96
CSTF3-208ENST00000528865 TMC3Q7Z5M5 1100 aa9.08□□□□□ -0.96
CSTF3-208ENST00000528865 DAAM2Q86T65 1068 aa9.08□□□□□ -0.96
CSTF3-208ENST00000528865 FAM160B2Q86V87 743 aa9.08□□□□□ -0.96
CSTF3-208ENST00000528865 FAM178BQ8IXR5 827 aa9.08□□□□□ -0.96
CSTF3-208ENST00000528865 DAW1Q8N136 415 aa9.08□□□□□ -0.96
CSTF3-208ENST00000528865 FLAD1Q8NFF5 587 aa9.08□□□□□ -0.96
CSTF3-208ENST00000528865 MYCBPAPQ8TBZ2 947 aa9.08□□□□□ -0.96
CSTF3-208ENST00000528865 MORC4Q8TE76 937 aa9.08□□□□□ -0.96
CSTF3-208ENST00000528865 ATP8B4Q8TF62 1192 aa9.08□□□□□ -0.96
CSTF3-208ENST00000528865 CHURC1Q8WUH1 139 aa9.08□□□□□ -0.96
CSTF3-208ENST00000528865 C7orf43Q8WVR3 580 aa9.08□□□□□ -0.96
CSTF3-208ENST00000528865 CTNNBL1Q8WYA6 563 aaPredicted RBP9.08□□□□□ -0.96
CSTF3-208ENST00000528865 CENPTQ96BT3 561 aa9.08□□□□□ -0.96
CSTF3-208ENST00000528865 TLCD1Q96CP7 247 aa9.08□□□□□ -0.96
CSTF3-208ENST00000528865 RPS6KC1Q96S38 1066 aa9.08□□□□□ -0.96
CSTF3-208ENST00000528865 TEKT3Q9BXF9 490 aa9.08□□□□□ -0.96
CSTF3-208ENST00000528865 RAB17Q9H0T7 212 aa9.08□□□□□ -0.96
CSTF3-208ENST00000528865 UNC45AQ9H3U1 944 aa9.08□□□□□ -0.96
CSTF3-208ENST00000528865 ST6GALNAC4Q9H4F1 302 aa9.08□□□□□ -0.96
CSTF3-208ENST00000528865 TMEM206Q9H813 350 aa9.08□□□□□ -0.96
CSTF3-208ENST00000528865 ARHGEF10LQ9HCE6 1279 aa9.08□□□□□ -0.96
CSTF3-208ENST00000528865 POLD4Q9HCU8 107 aa9.08□□□□□ -0.96
CSTF3-208ENST00000528865 OSGEPQ9NPF4 335 aa9.08□□□□□ -0.96
CSTF3-208ENST00000528865 ZDHHC18Q9NUE0 388 aa9.08□□□□□ -0.96
CSTF3-208ENST00000528865 AMACRQ9UHK6 382 aa9.08□□□□□ -0.96
CSTF3-208ENST00000528865 SLC12A6Q9UHW9 1150 aa9.08□□□□□ -0.96
CSTF3-208ENST00000528865 DBR1Q9UK59 544 aaKnown RBP9.08□□□□□ -0.96
CSTF3-208ENST00000528865 UTP11Q9Y3A2 253 aaKnown RBP9.08□□□□□ -0.96
CSTF3-208ENST00000528865 AFF2P51816 1311 aa9.07□□□□□ -0.96
CSTF3-208ENST00000528865 GMNCA6NCL1 334 aa9.07□□□□□ -0.96
CSTF3-208ENST00000528865 MIF4GDA9UHW6 222 aaKnown RBP9.07□□□□□ -0.96
CSTF3-208ENST00000528865 ANKRD65E5RJM6 399 aa9.07□□□□□ -0.96
CSTF3-208ENST00000528865 FOXN3O00409 490 aaPredicted RBP9.07□□□□□ -0.96
CSTF3-208ENST00000528865 ZBTB39O15060 712 aa9.07□□□□□ -0.96
CSTF3-208ENST00000528865 TTI1O43156 1089 aa9.07□□□□□ -0.96
CSTF3-208ENST00000528865 TBC1D12O60347 775 aa9.07□□□□□ -0.96
CSTF3-208ENST00000528865 GAS7O60861 476 aa9.07□□□□□ -0.96
CSTF3-208ENST00000528865 ERLIN2O94905 339 aa9.07□□□□□ -0.96
CSTF3-208ENST00000528865 FGGP02679 453 aa9.07□□□□□ -0.96
CSTF3-208ENST00000528865 NUDT17P0C025 328 aa9.07□□□□□ -0.96
CSTF3-208ENST00000528865 ARP10275 920 aa9.07□□□□□ -0.96
CSTF3-208ENST00000528865 ALAS1P13196 640 aa9.07□□□□□ -0.96
CSTF3-208ENST00000528865 TAL1P17542 331 aaPredicted RBP9.07□□□□□ -0.96
CSTF3-208ENST00000528865 INPP5BP32019 993 aa9.07□□□□□ -0.96
CSTF3-208ENST00000528865 CTNNA1P35221 906 aaKnown RBP9.07□□□□□ -0.96
CSTF3-208ENST00000528865 FLT3P36888 993 aa9.07□□□□□ -0.96
CSTF3-208ENST00000528865 STAT2P52630 851 aa9.07□□□□□ -0.96
CSTF3-208ENST00000528865 RBM5P52756 815 aaKnown RBP eCLIP9.07□□□□□ -0.96
CSTF3-208ENST00000528865 PPP2R2AP63151 447 aa9.07□□□□□ -0.96
CSTF3-208ENST00000528865 MYL7Q01449 175 aa9.07□□□□□ -0.96
CSTF3-208ENST00000528865 GUCY1A3Q02108 690 aa9.07□□□□□ -0.96
CSTF3-208ENST00000528865 BFSP1Q12934 665 aa9.07□□□□□ -0.96
CSTF3-208ENST00000528865 IKQ13123 557 aaPredicted RBP9.07□□□□□ -0.96
CSTF3-208ENST00000528865 DRP2Q13474 957 aa9.07□□□□□ -0.96
CSTF3-208ENST00000528865 DHX34Q14147 1143 aaKnown RBP9.07□□□□□ -0.96
CSTF3-208ENST00000528865 EPC2Q52LR7 807 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 341.2 ms