RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 LONRF3Q496Y0 759 aa15.91■□□□□ 0.14
CAPN1-216ENST00000528739 HAUS3Q68CZ6 603 aa15.91■□□□□ 0.14
CAPN1-216ENST00000528739 FERMT3Q86UX7 667 aa15.91■□□□□ 0.14
CAPN1-216ENST00000528739 ECHDC2Q86YB7 292 aa15.91■□□□□ 0.14
CAPN1-216ENST00000528739 ATXN2LQ8WWM7 1075 aaKnown RBP15.91■□□□□ 0.14
CAPN1-216ENST00000528739 MRPL38Q96DV4 380 aaKnown RBP15.91■□□□□ 0.14
CAPN1-216ENST00000528739 NACC1Q96RE7 527 aa15.91■□□□□ 0.14
CAPN1-216ENST00000528739 ELAC1Q9H777 363 aaKnown RBP15.91■□□□□ 0.14
CAPN1-216ENST00000528739 ALG13Q9NP73 1137 aaKnown RBP15.91■□□□□ 0.14
CAPN1-216ENST00000528739 CHST12Q9NRB3 414 aa15.91■□□□□ 0.14
CAPN1-216ENST00000528739 AAASQ9NRG9 546 aa15.91■□□□□ 0.14
CAPN1-216ENST00000528739 LRWD1Q9UFC0 647 aa15.91■□□□□ 0.14
CAPN1-216ENST00000528739 PCDHB12Q9Y5F1 795 aa15.91■□□□□ 0.14
CAPN1-216ENST00000528739 ARHGEF35A5YM69 484 aa15.9■□□□□ 0.14
CAPN1-216ENST00000528739 ERLIN2O94905 339 aa15.9■□□□□ 0.14
CAPN1-216ENST00000528739 PHKA2P46019 1235 aa15.9■□□□□ 0.14
CAPN1-216ENST00000528739 RARRES1P49788 294 aa15.9■□□□□ 0.14
CAPN1-216ENST00000528739 FAM189BP81408 668 aa15.9■□□□□ 0.14
CAPN1-216ENST00000528739 MXD4Q14582 209 aaPredicted RBP15.9■□□□□ 0.14
CAPN1-216ENST00000528739 ZRSR1Q15695 479 aaKnown RBP15.9■□□□□ 0.14
CAPN1-216ENST00000528739 AAK1Q2M2I8 961 aa15.9■□□□□ 0.14
CAPN1-216ENST00000528739 RILPL1Q5EBL4 403 aa15.9■□□□□ 0.14
CAPN1-216ENST00000528739 TJAP1Q5JTD0 557 aa15.9■□□□□ 0.14
CAPN1-216ENST00000528739 POTEGQ6S5H5 508 aa15.9■□□□□ 0.14
CAPN1-216ENST00000528739 DTHD1Q6ZMT9 781 aa15.9■□□□□ 0.14
CAPN1-216ENST00000528739 SRGAP1Q7Z6B7 1085 aa15.9■□□□□ 0.14
CAPN1-216ENST00000528739 SYMPKQ92797 1274 aaKnown RBP15.9■□□□□ 0.14
CAPN1-216ENST00000528739 CLP1Q92989 425 aaKnown RBP15.9■□□□□ 0.14
CAPN1-216ENST00000528739 HLA-CQ95604 372 aa15.9■□□□□ 0.14
CAPN1-216ENST00000528739 POLR3CQ9BUI4 534 aaPredicted RBP15.9■□□□□ 0.14
CAPN1-216ENST00000528739 RC3H2Q9HBD1 1191 aaKnown RBP15.9■□□□□ 0.14
CAPN1-216ENST00000528739 FOXD4L1Q9NU39 408 aa15.9■□□□□ 0.14
CAPN1-216ENST00000528739 TYW1Q9NV66 732 aaKnown RBP15.9■□□□□ 0.14
CAPN1-216ENST00000528739 VPS37CA5D8V6 355 aaPredicted RBP15.89■□□□□ 0.13
CAPN1-216ENST00000528739 INO80B-WBP1J3KQ70 363 aa15.89■□□□□ 0.13
CAPN1-216ENST00000528739 GRM6O15303 877 aa15.89■□□□□ 0.13
CAPN1-216ENST00000528739 SPATA31C1P0DKV0 1188 aa15.89■□□□□ 0.13
CAPN1-216ENST00000528739 SKIP12755 728 aa15.89■□□□□ 0.13
CAPN1-216ENST00000528739 XRCC6P12956 609 aaKnown RBP eCLIP15.89■□□□□ 0.13
CAPN1-216ENST00000528739 TOB1P50616 345 aaPredicted RBP15.89■□□□□ 0.13
CAPN1-216ENST00000528739 TFF2Q03403 129 aa15.89■□□□□ 0.13
CAPN1-216ENST00000528739 TIGD5Q53EQ6 642 aa15.89■□□□□ 0.13
CAPN1-216ENST00000528739 THNSL1Q8IYQ7 743 aa15.89■□□□□ 0.13
CAPN1-216ENST00000528739 KLHL23Q8NBE8 558 aa15.89■□□□□ 0.13
CAPN1-216ENST00000528739 MICAL1Q8TDZ2 1067 aa15.89■□□□□ 0.13
CAPN1-216ENST00000528739 SNX29Q8TEQ0 813 aa15.89■□□□□ 0.13
CAPN1-216ENST00000528739 ASB2Q96Q27 587 aa15.89■□□□□ 0.13
CAPN1-216ENST00000528739 PLVAPQ9BX97 442 aa15.89■□□□□ 0.13
CAPN1-216ENST00000528739 TMEM117Q9H0C3 514 aa15.89■□□□□ 0.13
CAPN1-216ENST00000528739 POLR3FQ9H1D9 316 aaPredicted RBP15.89■□□□□ 0.13
CAPN1-216ENST00000528739 IFT122Q9HBG6 1241 aa15.89■□□□□ 0.13
CAPN1-216ENST00000528739 COG5Q9UP83 839 aa15.89■□□□□ 0.13
CAPN1-216ENST00000528739 STK24Q9Y6E0 443 aa15.89■□□□□ 0.13
CAPN1-216ENST00000528739 A0A0U1RQF3 1178 aa15.88■□□□□ 0.13
CAPN1-216ENST00000528739 C5orf67F2Z3F1 127 aa15.88■□□□□ 0.13
CAPN1-216ENST00000528739 EOMESO95936 686 aa15.88■□□□□ 0.13
CAPN1-216ENST00000528739 RPA1P27694 616 aa15.88■□□□□ 0.13
CAPN1-216ENST00000528739 FXR2P51116 673 aaKnown RBP eCLIP15.88■□□□□ 0.13
CAPN1-216ENST00000528739 TMEM132AQ24JP5 1023 aa15.88■□□□□ 0.13
CAPN1-216ENST00000528739 TCEAL5Q5H9L2 206 aa15.88■□□□□ 0.13
CAPN1-216ENST00000528739 KRT79Q5XKE5 535 aa15.88■□□□□ 0.13
CAPN1-216ENST00000528739 CRIPAKQ8N1N5 446 aa15.88■□□□□ 0.13
CAPN1-216ENST00000528739 HELQQ8TDG4 1101 aa15.88■□□□□ 0.13
CAPN1-216ENST00000528739 COL25A1Q9BXS0 654 aaPredicted RBP15.88■□□□□ 0.13
CAPN1-216ENST00000528739 NSUN3Q9H649 340 aaKnown RBP15.88■□□□□ 0.13
CAPN1-216ENST00000528739 IGFLR1Q9H665 355 aa15.88■□□□□ 0.13
CAPN1-216ENST00000528739 XPNPEP1Q9NQW7 623 aa15.88■□□□□ 0.13
CAPN1-216ENST00000528739 PLAGL2Q9UPG8 496 aa15.88■□□□□ 0.13
CAPN1-216ENST00000528739 KIAA1024Q9UPX6 916 aa15.88■□□□□ 0.13
CAPN1-216ENST00000528739 INPP5FQ9Y2H2 1132 aa15.88■□□□□ 0.13
CAPN1-216ENST00000528739 LRRIQ4A6NIV6 560 aa15.87■□□□□ 0.13
CAPN1-216ENST00000528739 LAD1O00515 517 aa15.87■□□□□ 0.13
CAPN1-216ENST00000528739 PDIA5Q14554 519 aa15.87■□□□□ 0.13
CAPN1-216ENST00000528739 NAALADL2Q58DX5 795 aa15.87■□□□□ 0.13
CAPN1-216ENST00000528739 C4orf32Q8N8J7 132 aa15.87■□□□□ 0.13
CAPN1-216ENST00000528739 ASAP3Q8TDY4 903 aa15.87■□□□□ 0.13
CAPN1-216ENST00000528739 POF1BQ8WVV4 589 aa15.87■□□□□ 0.13
CAPN1-216ENST00000528739 LPPQ93052 612 aa15.87■□□□□ 0.13
CAPN1-216ENST00000528739 PGBD4Q96DM1 585 aa15.87■□□□□ 0.13
CAPN1-216ENST00000528739 CASD1Q96PB1 797 aa15.87■□□□□ 0.13
CAPN1-216ENST00000528739 LMAN2LQ9H0V9 348 aa15.87■□□□□ 0.13
CAPN1-216ENST00000528739 MINDY3Q9H8M7 445 aa15.87■□□□□ 0.13
CAPN1-216ENST00000528739 GPRC5CQ9NQ84 441 aa15.87■□□□□ 0.13
CAPN1-216ENST00000528739 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.87■□□□□ 0.13
CAPN1-216ENST00000528739 FAM105AQ9NUU6 356 aa15.87■□□□□ 0.13
CAPN1-216ENST00000528739 DDX19AQ9NUU7 478 aaKnown RBP15.87■□□□□ 0.13
CAPN1-216ENST00000528739 HCSTQ9UBK5 93 aa15.87■□□□□ 0.13
CAPN1-216ENST00000528739 DBR1Q9UK59 544 aaKnown RBP15.87■□□□□ 0.13
CAPN1-216ENST00000528739 LOXHD1Q8IVV2 1947 aa15.87■□□□□ 0.13
CAPN1-216ENST00000528739 TTC3P53804 2025 aa15.87■□□□□ 0.13
CAPN1-216ENST00000528739 ITGB1P05556 798 aa15.86■□□□□ 0.13
CAPN1-216ENST00000528739 LAG3P18627 525 aa15.86■□□□□ 0.13
CAPN1-216ENST00000528739 LIG1P18858 919 aa15.86■□□□□ 0.13
CAPN1-216ENST00000528739 RNASELQ05823 741 aaKnown RBP15.86■□□□□ 0.13
CAPN1-216ENST00000528739 PADI6Q6TGC4 694 aa15.86■□□□□ 0.13
CAPN1-216ENST00000528739 LRRC43Q8N309 656 aa15.86■□□□□ 0.13
CAPN1-216ENST00000528739 COLGALT1Q8NBJ5 622 aa15.86■□□□□ 0.13
CAPN1-216ENST00000528739 MCPH1Q8NEM0 835 aa15.86■□□□□ 0.13
CAPN1-216ENST00000528739 P2RX5Q93086 422 aa15.86■□□□□ 0.13
CAPN1-216ENST00000528739 PPP2R3CQ969Q6 453 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms