RNA–Protein interactions for RNA: ENST00000528621.5

CTNND1-219, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-219ENST00000528621 DCP1AQ9NPI6 582 aaPredicted RBP9.08□□□□□ -0.96
CTNND1-219ENST00000528621 HERC5Q9UII4 1024 aaKnown RBP9.08□□□□□ -0.96
CTNND1-219ENST00000528621 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.08□□□□□ -0.96
CTNND1-219ENST00000528621 NEXMIFQ5QGS0 1516 aa9.08□□□□□ -0.96
CTNND1-219ENST00000528621 KPNA7A9QM74 516 aa9.07□□□□□ -0.96
CTNND1-219ENST00000528621 CYP27B1O15528 508 aa9.07□□□□□ -0.96
CTNND1-219ENST00000528621 CTNND1O60716 968 aaKnown RBP9.07□□□□□ -0.96
CTNND1-219ENST00000528621 SMIM24O75264 130 aa9.07□□□□□ -0.96
CTNND1-219ENST00000528621 ZFXP17010 805 aaPredicted RBP9.07□□□□□ -0.96
CTNND1-219ENST00000528621 FOXO4P98177 505 aa9.07□□□□□ -0.96
CTNND1-219ENST00000528621 BBS9Q3SYG4 887 aa9.07□□□□□ -0.96
CTNND1-219ENST00000528621 FSCBQ5H9T9 825 aa9.07□□□□□ -0.96
CTNND1-219ENST00000528621 FRA10AC1Q70Z53 315 aa9.07□□□□□ -0.96
CTNND1-219ENST00000528621 SCYL3Q8IZE3 742 aa9.07□□□□□ -0.96
CTNND1-219ENST00000528621 KCTD17Q8N5Z5 321 aa9.07□□□□□ -0.96
CTNND1-219ENST00000528621 IFT43Q96FT9 208 aa9.07□□□□□ -0.96
CTNND1-219ENST00000528621 FAM49AQ9H0Q0 323 aaPredicted RBP9.07□□□□□ -0.96
CTNND1-219ENST00000528621 TSPYL2Q9H2G4 693 aaPredicted RBP9.07□□□□□ -0.96
CTNND1-219ENST00000528621 SAYSD1Q9NPB0 183 aa9.07□□□□□ -0.96
CTNND1-219ENST00000528621 IRAK4Q9NWZ3 460 aa9.07□□□□□ -0.96
CTNND1-219ENST00000528621 LMCD1Q9NZU5 365 aa9.07□□□□□ -0.96
CTNND1-219ENST00000528621 TRIM49BA6NDI0 452 aa9.07□□□□□ -0.96
CTNND1-219ENST00000528621 LRRC53A6NM62 1247 aa9.07□□□□□ -0.96
CTNND1-219ENST00000528621 NMT2O60551 498 aa9.07□□□□□ -0.96
CTNND1-219ENST00000528621 PYGBP11216 843 aa9.07□□□□□ -0.96
CTNND1-219ENST00000528621 VAMP7P51809 220 aa9.07□□□□□ -0.96
CTNND1-219ENST00000528621 PHEXP78562 749 aa9.07□□□□□ -0.96
CTNND1-219ENST00000528621 SPARCL1Q14515 664 aa9.07□□□□□ -0.96
CTNND1-219ENST00000528621 CASP8Q14790 479 aa9.07□□□□□ -0.96
CTNND1-219ENST00000528621 BCORL1Q5H9F3 1711 aa9.07□□□□□ -0.96
CTNND1-219ENST00000528621 EPHA10Q5JZY3 1008 aa9.07□□□□□ -0.96
CTNND1-219ENST00000528621 TMTC4Q5T4D3 741 aa9.07□□□□□ -0.96
CTNND1-219ENST00000528621 SYDE1Q6ZW31 735 aaPredicted RBP9.07□□□□□ -0.96
CTNND1-219ENST00000528621 CRLF3Q8IUI8 442 aa9.07□□□□□ -0.96
CTNND1-219ENST00000528621 SH3TC2Q8TF17 1288 aa9.07□□□□□ -0.96
CTNND1-219ENST00000528621 MRPL4Q9BYD3 311 aaKnown RBP9.07□□□□□ -0.96
CTNND1-219ENST00000528621 MAGEB5Q9BZ81 275 aa9.07□□□□□ -0.96
CTNND1-219ENST00000528621 ADAM22Q9P0K1 906 aa9.07□□□□□ -0.96
CTNND1-219ENST00000528621 CNOT8Q9UFF9 292 aaKnown RBP9.07□□□□□ -0.96
CTNND1-219ENST00000528621 PPME1Q9Y570 386 aa9.07□□□□□ -0.96
CTNND1-219ENST00000528621 CLTCQ00610 1675 aaKnown RBP9.07□□□□□ -0.96
CTNND1-219ENST00000528621 KDM6AO15550 1401 aaPredicted RBP9.07□□□□□ -0.96
CTNND1-219ENST00000528621 E9PMD0 336 aa9.07□□□□□ -0.96
CTNND1-219ENST00000528621 SLC16A4O15374 487 aa9.07□□□□□ -0.96
CTNND1-219ENST00000528621 CA4P22748 312 aa9.07□□□□□ -0.96
CTNND1-219ENST00000528621 OXER1Q8TDS5 423 aa9.07□□□□□ -0.96
CTNND1-219ENST00000528621 ANAPC7Q9UJX3 599 aa9.07□□□□□ -0.96
CTNND1-219ENST00000528621 DENND3A2RUS2 1198 aa9.07□□□□□ -0.96
CTNND1-219ENST00000528621 MX2P20592 715 aa9.07□□□□□ -0.96
CTNND1-219ENST00000528621 QARSP47897 775 aaKnown RBP9.07□□□□□ -0.96
CTNND1-219ENST00000528621 FBXL13Q8NEE6 735 aa9.07□□□□□ -0.96
CTNND1-219ENST00000528621 MAML1Q92585 1016 aa9.07□□□□□ -0.96
CTNND1-219ENST00000528621 CEP95Q96GE4 821 aa9.07□□□□□ -0.96
CTNND1-219ENST00000528621 VPS39Q96JC1 886 aa9.07□□□□□ -0.96
CTNND1-219ENST00000528621 WRNIP1Q96S55 665 aa9.07□□□□□ -0.96
CTNND1-219ENST00000528621 ZBTB18Q99592 522 aa9.07□□□□□ -0.96
CTNND1-219ENST00000528621 FAM213AQ9BRX8 229 aa9.07□□□□□ -0.96
CTNND1-219ENST00000528621 NUP85Q9BW27 656 aa9.07□□□□□ -0.96
CTNND1-219ENST00000528621 ABCB6Q9NP58 842 aa9.07□□□□□ -0.96
CTNND1-219ENST00000528621 RRP15Q9Y3B9 282 aaKnown RBP9.07□□□□□ -0.96
CTNND1-219ENST00000528621 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.07□□□□□ -0.96
CTNND1-219ENST00000528621 FRMPD1Q5SYB0 1578 aa9.07□□□□□ -0.96
CTNND1-219ENST00000528621 PTPRUQ92729 1446 aa9.07□□□□□ -0.96
CTNND1-219ENST00000528621 SPECC1L-ADORA2AF8WAN1 911 aa9.07□□□□□ -0.96
CTNND1-219ENST00000528621 HUS1O60921 280 aa9.07□□□□□ -0.96
CTNND1-219ENST00000528621 CHRNA3P32297 505 aa9.07□□□□□ -0.96
CTNND1-219ENST00000528621 PRCPP42785 496 aa9.07□□□□□ -0.96
CTNND1-219ENST00000528621 CACNB3P54284 484 aa9.07□□□□□ -0.96
CTNND1-219ENST00000528621 GFPT1Q06210 699 aaPredicted RBP9.07□□□□□ -0.96
CTNND1-219ENST00000528621 DMTNQ08495 405 aa9.07□□□□□ -0.96
CTNND1-219ENST00000528621 DRP2Q13474 957 aa9.07□□□□□ -0.96
CTNND1-219ENST00000528621 PDIA5Q14554 519 aa9.07□□□□□ -0.96
CTNND1-219ENST00000528621 CLEC17AQ6ZS10 378 aa9.07□□□□□ -0.96
CTNND1-219ENST00000528621 CDKL3Q8IVW4 592 aaPredicted RBP9.07□□□□□ -0.96
CTNND1-219ENST00000528621 THNSL1Q8IYQ7 743 aa9.07□□□□□ -0.96
CTNND1-219ENST00000528621 GPD1LQ8N335 351 aa9.07□□□□□ -0.96
CTNND1-219ENST00000528621 MICAL1Q8TDZ2 1067 aa9.07□□□□□ -0.96
CTNND1-219ENST00000528621 ZHX2Q9Y6X8 837 aa9.07□□□□□ -0.96
CTNND1-219ENST00000528621 M0QYV0 167 aa9.06□□□□□ -0.96
CTNND1-219ENST00000528621 KRT38O76015 456 aa9.06□□□□□ -0.96
CTNND1-219ENST00000528621 HSPA4LO95757 839 aa9.06□□□□□ -0.96
CTNND1-219ENST00000528621 KRT7P08729 469 aa9.06□□□□□ -0.96
CTNND1-219ENST00000528621 SCP2P22307 547 aa9.06□□□□□ -0.96
CTNND1-219ENST00000528621 CLCN6P51797 869 aa9.06□□□□□ -0.96
CTNND1-219ENST00000528621 KRT33BQ14525 404 aa9.06□□□□□ -0.96
CTNND1-219ENST00000528621 PDCD2Q16342 344 aaPredicted RBP9.06□□□□□ -0.96
CTNND1-219ENST00000528621 LRRC43Q8N309 656 aa9.06□□□□□ -0.96
CTNND1-219ENST00000528621 DACT3Q96B18 629 aaPredicted RBP9.06□□□□□ -0.96
CTNND1-219ENST00000528621 TRIM4Q9C037 500 aa9.06□□□□□ -0.96
CTNND1-219ENST00000528621 OLA1Q9NTK5 396 aaKnown RBP9.06□□□□□ -0.96
CTNND1-219ENST00000528621 KCND2Q9NZV8 630 aa9.06□□□□□ -0.96
CTNND1-219ENST00000528621 KIAA1210Q9ULL0 1709 aa9.06□□□□□ -0.96
CTNND1-219ENST00000528621 ASB14A6NK59 587 aa9.06□□□□□ -0.96
CTNND1-219ENST00000528621 AP3B1O00203 1094 aa9.06□□□□□ -0.96
CTNND1-219ENST00000528621 ASAP2O43150 1006 aa9.06□□□□□ -0.96
CTNND1-219ENST00000528621 PRDX5P30044 214 aa9.06□□□□□ -0.96
CTNND1-219ENST00000528621 SNRPFP62306 86 aaKnown RBP9.06□□□□□ -0.96
CTNND1-219ENST00000528621 ATP2C1P98194 919 aaPredicted RBP9.06□□□□□ -0.96
CTNND1-219ENST00000528621 ITPRIPL1Q6GPH6 555 aa9.06□□□□□ -0.96
CTNND1-219ENST00000528621 GUF1Q8N442 669 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms