RNA–Protein interactions for RNA: ENST00000528471.1

CHRDL2-205, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-205ENST00000528471 ZSCAN31Q96LW9 406 aaPredicted RBP15.54■□□□□ 0.08
CHRDL2-205ENST00000528471 LLPHQ9BRT6 129 aaKnown RBP15.54■□□□□ 0.08
CHRDL2-205ENST00000528471 SH2B1Q9NRF2 756 aaPredicted RBP15.54■□□□□ 0.08
CHRDL2-205ENST00000528471 BMP2KQ9NSY1 1161 aaPredicted RBP15.54■□□□□ 0.08
CHRDL2-205ENST00000528471 TYW1Q9NV66 732 aaKnown RBP15.54■□□□□ 0.08
CHRDL2-205ENST00000528471 WRAP73Q9P2S5 460 aaPredicted RBP15.54■□□□□ 0.08
CHRDL2-205ENST00000528471 COL4A3BPQ9Y5P4 624 aa15.54■□□□□ 0.08
CHRDL2-205ENST00000528471 GAS2O43903 313 aaKnown RBP15.53■□□□□ 0.08
CHRDL2-205ENST00000528471 ATP2B1P20020 1258 aa15.53■□□□□ 0.08
CHRDL2-205ENST00000528471 DNAJB1P25685 340 aa15.53■□□□□ 0.08
CHRDL2-205ENST00000528471 TXKP42681 527 aa15.53■□□□□ 0.08
CHRDL2-205ENST00000528471 HMGN5P82970 282 aaKnown RBP15.53■□□□□ 0.08
CHRDL2-205ENST00000528471 HYAL1Q12794 435 aa15.53■□□□□ 0.08
CHRDL2-205ENST00000528471 GNL2Q13823 731 aaKnown RBP15.53■□□□□ 0.08
CHRDL2-205ENST00000528471 EMC2Q15006 297 aa15.53■□□□□ 0.08
CHRDL2-205ENST00000528471 PUS10Q3MIT2 529 aaKnown RBP15.53■□□□□ 0.08
CHRDL2-205ENST00000528471 TWF2Q6IBS0 349 aaKnown RBP15.53■□□□□ 0.08
CHRDL2-205ENST00000528471 CATSPER4Q7RTX7 472 aa15.53■□□□□ 0.08
CHRDL2-205ENST00000528471 KSR1Q8IVT5 923 aa15.53■□□□□ 0.08
CHRDL2-205ENST00000528471 TPH2Q8IWU9 490 aa15.53■□□□□ 0.08
CHRDL2-205ENST00000528471 FAM184AQ8NB25 1140 aa15.53■□□□□ 0.08
CHRDL2-205ENST00000528471 COLGALT1Q8NBJ5 622 aa15.53■□□□□ 0.08
CHRDL2-205ENST00000528471 SPPL3Q8TCT6 385 aa15.53■□□□□ 0.08
CHRDL2-205ENST00000528471 NEK9Q8TD19 979 aa15.53■□□□□ 0.08
CHRDL2-205ENST00000528471 TCP11Q8WWU5 503 aa15.53■□□□□ 0.08
CHRDL2-205ENST00000528471 IGFLR1Q9H665 355 aa15.53■□□□□ 0.08
CHRDL2-205ENST00000528471 DHX33Q9H6R0 707 aaKnown RBP15.53■□□□□ 0.08
CHRDL2-205ENST00000528471 TTC12Q9H892 705 aaPredicted RBP15.53■□□□□ 0.08
CHRDL2-205ENST00000528471 CHST12Q9NRB3 414 aa15.53■□□□□ 0.08
CHRDL2-205ENST00000528471 HCSTQ9UBK5 93 aa15.53■□□□□ 0.08
CHRDL2-205ENST00000528471 PIN4Q9Y237 131 aaKnown RBP15.53■□□□□ 0.08
CHRDL2-205ENST00000528471 FAM50BQ9Y247 325 aa15.53■□□□□ 0.08
CHRDL2-205ENST00000528471 A0A0U1RQF3 1178 aa15.52■□□□□ 0.08
CHRDL2-205ENST00000528471 FGF18O76093 207 aa15.52■□□□□ 0.08
CHRDL2-205ENST00000528471 UBE3AQ05086 875 aa15.52■□□□□ 0.08
CHRDL2-205ENST00000528471 COL19A1Q14993 1142 aa15.52■□□□□ 0.08
CHRDL2-205ENST00000528471 ZNF579Q8NAF0 562 aaKnown RBP15.52■□□□□ 0.08
CHRDL2-205ENST00000528471 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.52■□□□□ 0.08
CHRDL2-205ENST00000528471 TMEM143Q96AN5 459 aa15.52■□□□□ 0.08
CHRDL2-205ENST00000528471 EIF2AK1Q9BQI3 630 aaKnown RBP15.52■□□□□ 0.08
CHRDL2-205ENST00000528471 WNT7AO00755 349 aa15.51■□□□□ 0.07
CHRDL2-205ENST00000528471 EOMESO95936 686 aa15.51■□□□□ 0.07
CHRDL2-205ENST00000528471 SRGAP2CP0DJJ0 459 aa15.51■□□□□ 0.07
CHRDL2-205ENST00000528471 SKIP12755 728 aa15.51■□□□□ 0.07
CHRDL2-205ENST00000528471 IL9P15248 144 aa15.51■□□□□ 0.07
CHRDL2-205ENST00000528471 MCM7P33993 719 aa15.51■□□□□ 0.07
CHRDL2-205ENST00000528471 CAMK1Q14012 370 aa15.51■□□□□ 0.07
CHRDL2-205ENST00000528471 HELQQ8TDG4 1101 aa15.51■□□□□ 0.07
CHRDL2-205ENST00000528471 MICAL1Q8TDZ2 1067 aa15.51■□□□□ 0.07
CHRDL2-205ENST00000528471 PRPF31Q8WWY3 499 aaKnown RBP15.51■□□□□ 0.07
CHRDL2-205ENST00000528471 ZNF558Q96NG5 402 aa15.51■□□□□ 0.07
CHRDL2-205ENST00000528471 CASD1Q96PB1 797 aa15.51■□□□□ 0.07
CHRDL2-205ENST00000528471 MTRQ99707 1265 aa15.51■□□□□ 0.07
CHRDL2-205ENST00000528471 MRPL9Q9BYD2 267 aaKnown RBP15.51■□□□□ 0.07
CHRDL2-205ENST00000528471 CWH43Q9H720 699 aa15.51■□□□□ 0.07
CHRDL2-205ENST00000528471 TLR9Q9NR96 1032 aa15.51■□□□□ 0.07
CHRDL2-205ENST00000528471 RNF19AQ9NV58 838 aa15.51■□□□□ 0.07
CHRDL2-205ENST00000528471 C5orf42Q9H799 3197 aa15.5■□□□□ 0.07
CHRDL2-205ENST00000528471 GRXCR2A6NFK2 248 aa15.5■□□□□ 0.07
CHRDL2-205ENST00000528471 SLITRK3O94933 977 aa15.5■□□□□ 0.07
CHRDL2-205ENST00000528471 GTF2F1P35269 517 aaKnown RBP eCLIP15.5■□□□□ 0.07
CHRDL2-205ENST00000528471 IRS1P35568 1242 aa15.5■□□□□ 0.07
CHRDL2-205ENST00000528471 PPM1AP35813 382 aa15.5■□□□□ 0.07
CHRDL2-205ENST00000528471 PHKA2P46019 1235 aa15.5■□□□□ 0.07
CHRDL2-205ENST00000528471 NDUFV1P49821 464 aa15.5■□□□□ 0.07
CHRDL2-205ENST00000528471 RAB27AP51159 221 aa15.5■□□□□ 0.07
CHRDL2-205ENST00000528471 LAMTOR4Q0VGL1 99 aa15.5■□□□□ 0.07
CHRDL2-205ENST00000528471 CLLU1OSQ5K130 101 aa15.5■□□□□ 0.07
CHRDL2-205ENST00000528471 ZNF598Q86UK7 904 aaKnown RBP15.5■□□□□ 0.07
CHRDL2-205ENST00000528471 MTMR9Q96QG7 549 aa15.5■□□□□ 0.07
CHRDL2-205ENST00000528471 KIF2CQ99661 725 aa15.5■□□□□ 0.07
CHRDL2-205ENST00000528471 FOXP1Q9H334 677 aaPredicted RBP15.5■□□□□ 0.07
CHRDL2-205ENST00000528471 UPF2Q9HAU5 1272 aaKnown RBP15.5■□□□□ 0.07
CHRDL2-205ENST00000528471 IFT122Q9HBG6 1241 aa15.5■□□□□ 0.07
CHRDL2-205ENST00000528471 TDRD15B5MCY1 1934 aaKnown RBP15.5■□□□□ 0.07
CHRDL2-205ENST00000528471 POTEMA6NI47 508 aa15.49■□□□□ 0.07
CHRDL2-205ENST00000528471 ZBTB39O15060 712 aa15.49■□□□□ 0.07
CHRDL2-205ENST00000528471 ASAP2O43150 1006 aa15.49■□□□□ 0.07
CHRDL2-205ENST00000528471 ATF7P17544 494 aaPredicted RBP15.49■□□□□ 0.07
CHRDL2-205ENST00000528471 SSTR3P32745 418 aaPredicted RBP15.49■□□□□ 0.07
CHRDL2-205ENST00000528471 NRIP1P48552 1158 aa15.49■□□□□ 0.07
CHRDL2-205ENST00000528471 RBM25P49756 843 aaKnown RBP15.49■□□□□ 0.07
CHRDL2-205ENST00000528471 RABEP1Q15276 862 aa15.49■□□□□ 0.07
CHRDL2-205ENST00000528471 CLUL1Q15846 466 aa15.49■□□□□ 0.07
CHRDL2-205ENST00000528471 CTC1Q2NKJ3 1217 aa15.49■□□□□ 0.07
CHRDL2-205ENST00000528471 KCNT2Q6UVM3 1135 aa15.49■□□□□ 0.07
CHRDL2-205ENST00000528471 SRGAP1Q7Z6B7 1085 aa15.49■□□□□ 0.07
CHRDL2-205ENST00000528471 ADGRD2Q7Z7M1 963 aa15.49■□□□□ 0.07
CHRDL2-205ENST00000528471 RNF149Q8NC42 400 aa15.49■□□□□ 0.07
CHRDL2-205ENST00000528471 FBXO18Q8NFZ0 1043 aa15.49■□□□□ 0.07
CHRDL2-205ENST00000528471 HSD17B14Q9BPX1 270 aa15.49■□□□□ 0.07
CHRDL2-205ENST00000528471 ANKEF1Q9NU02 776 aa15.49■□□□□ 0.07
CHRDL2-205ENST00000528471 AGPAT5Q9NUQ2 364 aa15.49■□□□□ 0.07
CHRDL2-205ENST00000528471 FAM105AQ9NUU6 356 aa15.49■□□□□ 0.07
CHRDL2-205ENST00000528471 PUF60Q9UHX1 559 aaKnown RBP15.49■□□□□ 0.07
CHRDL2-205ENST00000528471 LINC01565O15544 149 aa15.48■□□□□ 0.07
CHRDL2-205ENST00000528471 ST18O60284 1047 aa15.48■□□□□ 0.07
CHRDL2-205ENST00000528471 TBX10O75333 385 aa15.48■□□□□ 0.07
CHRDL2-205ENST00000528471 ERLIN2O94905 339 aa15.48■□□□□ 0.07
CHRDL2-205ENST00000528471 LYPLA2O95372 231 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms