RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 ZRSR1Q15695 479 aaKnown RBP10.13□□□□□ -0.79
CMTM1-210ENST00000528441 HAUS3Q68CZ6 603 aa10.13□□□□□ -0.79
CMTM1-210ENST00000528441 MAEAQ7L5Y9 396 aa10.13□□□□□ -0.79
CMTM1-210ENST00000528441 THNSL1Q8IYQ7 743 aa10.13□□□□□ -0.79
CMTM1-210ENST00000528441 CMTR2Q8IYT2 770 aaKnown RBP10.13□□□□□ -0.79
CMTM1-210ENST00000528441 TMEM87AQ8NBN3 555 aa10.13□□□□□ -0.79
CMTM1-210ENST00000528441 HAS1Q92839 578 aa10.13□□□□□ -0.79
CMTM1-210ENST00000528441 HLA-CQ95604 372 aa10.13□□□□□ -0.79
CMTM1-210ENST00000528441 NIFKQ9BYG3 293 aaKnown RBP10.13□□□□□ -0.79
CMTM1-210ENST00000528441 RAB34Q9BZG1 259 aa10.13□□□□□ -0.79
CMTM1-210ENST00000528441 FOXP1Q9H334 677 aaPredicted RBP10.13□□□□□ -0.79
CMTM1-210ENST00000528441 TMX1Q9H3N1 280 aa10.13□□□□□ -0.79
CMTM1-210ENST00000528441 PCDHB12Q9Y5F1 795 aa10.13□□□□□ -0.79
CMTM1-210ENST00000528441 COL4A3BPQ9Y5P4 624 aa10.13□□□□□ -0.79
CMTM1-210ENST00000528441 MRPL42Q9Y6G3 142 aaKnown RBP10.13□□□□□ -0.79
CMTM1-210ENST00000528441 MGEA5O60502 916 aa10.12□□□□□ -0.79
CMTM1-210ENST00000528441 LPXNO60711 386 aa10.12□□□□□ -0.79
CMTM1-210ENST00000528441 MAFO75444 373 aaPredicted RBP10.12□□□□□ -0.79
CMTM1-210ENST00000528441 DGKIO75912 1065 aa10.12□□□□□ -0.79
CMTM1-210ENST00000528441 RB1P06400 928 aa10.12□□□□□ -0.79
CMTM1-210ENST00000528441 FGFR1P11362 822 aa10.12□□□□□ -0.79
CMTM1-210ENST00000528441 DARSP14868 501 aaKnown RBP10.12□□□□□ -0.79
CMTM1-210ENST00000528441 LIG1P18858 919 aa10.12□□□□□ -0.79
CMTM1-210ENST00000528441 GJB2P29033 226 aa10.12□□□□□ -0.79
CMTM1-210ENST00000528441 BMPR1AP36894 532 aa10.12□□□□□ -0.79
CMTM1-210ENST00000528441 DRP2Q13474 957 aa10.12□□□□□ -0.79
CMTM1-210ENST00000528441 LONRF3Q496Y0 759 aa10.12□□□□□ -0.79
CMTM1-210ENST00000528441 POTEGQ6S5H5 508 aa10.12□□□□□ -0.79
CMTM1-210ENST00000528441 ANO5Q75V66 913 aa10.12□□□□□ -0.79
CMTM1-210ENST00000528441 ZNF410Q86VK4 478 aa10.12□□□□□ -0.79
CMTM1-210ENST00000528441 NOSTRINQ8IVI9 506 aa10.12□□□□□ -0.79
CMTM1-210ENST00000528441 KSR1Q8IVT5 923 aa10.12□□□□□ -0.79
CMTM1-210ENST00000528441 C4orf19Q8IY42 314 aa10.12□□□□□ -0.79
CMTM1-210ENST00000528441 FBXO18Q8NFZ0 1043 aa10.12□□□□□ -0.79
CMTM1-210ENST00000528441 ATXN2LQ8WWM7 1075 aaKnown RBP10.12□□□□□ -0.79
CMTM1-210ENST00000528441 TNFRSF25Q93038 417 aa10.12□□□□□ -0.79
CMTM1-210ENST00000528441 TMX3Q96JJ7 454 aa10.12□□□□□ -0.79
CMTM1-210ENST00000528441 IGFLR1Q9H665 355 aa10.12□□□□□ -0.79
CMTM1-210ENST00000528441 ALG13Q9NP73 1137 aaKnown RBP10.12□□□□□ -0.79
CMTM1-210ENST00000528441 RGS18Q9NS28 235 aa10.12□□□□□ -0.79
CMTM1-210ENST00000528441 LMCD1Q9NZU5 365 aa10.12□□□□□ -0.79
CMTM1-210ENST00000528441 COG5Q9UP83 839 aa10.12□□□□□ -0.79
CMTM1-210ENST00000528441 INPP5FQ9Y2H2 1132 aa10.12□□□□□ -0.79
CMTM1-210ENST00000528441 PPME1Q9Y570 386 aa10.12□□□□□ -0.79
CMTM1-210ENST00000528441 PRRC2BQ5JSZ5 2229 aaKnown RBP10.11□□□□□ -0.79
CMTM1-210ENST00000528441 TTC3P53804 2025 aa10.11□□□□□ -0.79
CMTM1-210ENST00000528441 VPS37CA5D8V6 355 aaPredicted RBP10.11□□□□□ -0.79
CMTM1-210ENST00000528441 ARHGEF35A5YM69 484 aa10.11□□□□□ -0.79
CMTM1-210ENST00000528441 H3BNC9 293 aa10.11□□□□□ -0.79
CMTM1-210ENST00000528441 INO80B-WBP1J3KQ70 363 aa10.11□□□□□ -0.79
CMTM1-210ENST00000528441 GAS2O43903 313 aaKnown RBP10.11□□□□□ -0.79
CMTM1-210ENST00000528441 SKIP12755 728 aa10.11□□□□□ -0.79
CMTM1-210ENST00000528441 CCT6AP40227 531 aaKnown RBP10.11□□□□□ -0.79
CMTM1-210ENST00000528441 PHKA2P46019 1235 aa10.11□□□□□ -0.79
CMTM1-210ENST00000528441 TFF2Q03403 129 aa10.11□□□□□ -0.79
CMTM1-210ENST00000528441 RNASELQ05823 741 aaKnown RBP10.11□□□□□ -0.79
CMTM1-210ENST00000528441 NBR1Q14596 966 aa10.11□□□□□ -0.79
CMTM1-210ENST00000528441 TARBP2Q15633 366 aaKnown RBP10.11□□□□□ -0.79
CMTM1-210ENST00000528441 FAM102BQ5T8I3 360 aa10.11□□□□□ -0.79
CMTM1-210ENST00000528441 RTN4RL1Q86UN2 441 aaPredicted RBP10.11□□□□□ -0.79
CMTM1-210ENST00000528441 LRRC43Q8N309 656 aa10.11□□□□□ -0.79
CMTM1-210ENST00000528441 RNF149Q8NC42 400 aa10.11□□□□□ -0.79
CMTM1-210ENST00000528441 RASSF8Q8NHQ8 419 aa10.11□□□□□ -0.79
CMTM1-210ENST00000528441 PIGOQ8TEQ8 1089 aa10.11□□□□□ -0.79
CMTM1-210ENST00000528441 MRPL38Q96DV4 380 aaKnown RBP10.11□□□□□ -0.79
CMTM1-210ENST00000528441 KIF2CQ99661 725 aa10.11□□□□□ -0.79
CMTM1-210ENST00000528441 COL25A1Q9BXS0 654 aaPredicted RBP10.11□□□□□ -0.79
CMTM1-210ENST00000528441 TRIM6Q9C030 488 aaPredicted RBP10.11□□□□□ -0.79
CMTM1-210ENST00000528441 TMEM60Q9H2L4 133 aa10.11□□□□□ -0.79
CMTM1-210ENST00000528441 ADAMTS10Q9H324 1103 aa10.11□□□□□ -0.79
CMTM1-210ENST00000528441 NSUN3Q9H649 340 aaKnown RBP10.11□□□□□ -0.79
CMTM1-210ENST00000528441 TMEM161AQ9NX61 479 aa10.11□□□□□ -0.79
CMTM1-210ENST00000528441 CLDND1Q9NY35 253 aa10.11□□□□□ -0.79
CMTM1-210ENST00000528441 LAMA2P24043 3122 aaKnown RBP10.11□□□□□ -0.79
CMTM1-210ENST00000528441 ARID2Q68CP9 1835 aa10.1□□□□□ -0.79
CMTM1-210ENST00000528441 A0A087WWV3 80 aa10.1□□□□□ -0.79
CMTM1-210ENST00000528441 LRRIQ4A6NIV6 560 aa10.1□□□□□ -0.79
CMTM1-210ENST00000528441 WNT7AO00755 349 aa10.1□□□□□ -0.79
CMTM1-210ENST00000528441 DGAT1O75907 488 aa10.1□□□□□ -0.79
CMTM1-210ENST00000528441 HSP90AA1P07900 732 aaKnown RBP10.1□□□□□ -0.79
CMTM1-210ENST00000528441 LAG3P18627 525 aa10.1□□□□□ -0.79
CMTM1-210ENST00000528441 KCNA5P22460 613 aa10.1□□□□□ -0.79
CMTM1-210ENST00000528441 TRAPPC10P48553 1259 aa10.1□□□□□ -0.79
CMTM1-210ENST00000528441 LAMTOR4Q0VGL1 99 aa10.1□□□□□ -0.79
CMTM1-210ENST00000528441 ORC2Q13416 577 aaPredicted RBP10.1□□□□□ -0.79
CMTM1-210ENST00000528441 BMS1Q14692 1282 aaKnown RBP10.1□□□□□ -0.79
CMTM1-210ENST00000528441 TCEAL5Q5H9L2 206 aa10.1□□□□□ -0.79
CMTM1-210ENST00000528441 LARP1BQ659C4 914 aaKnown RBP10.1□□□□□ -0.79
CMTM1-210ENST00000528441 B3GNT9Q6UX72 402 aa10.1□□□□□ -0.79
CMTM1-210ENST00000528441 ECHDC2Q86YB7 292 aa10.1□□□□□ -0.79
CMTM1-210ENST00000528441 ZBTB8OSQ8IWT0 167 aa10.1□□□□□ -0.79
CMTM1-210ENST00000528441 LINC01465Q8N7H1 131 aa10.1□□□□□ -0.79
CMTM1-210ENST00000528441 KLHL23Q8NBE8 558 aa10.1□□□□□ -0.79
CMTM1-210ENST00000528441 URGCPQ8TCY9 931 aa10.1□□□□□ -0.79
CMTM1-210ENST00000528441 HELQQ8TDG4 1101 aa10.1□□□□□ -0.79
CMTM1-210ENST00000528441 ADAMTS19Q8TE59 1207 aa10.1□□□□□ -0.79
CMTM1-210ENST00000528441 SNX29Q8TEQ0 813 aa10.1□□□□□ -0.79
CMTM1-210ENST00000528441 PRPF31Q8WWY3 499 aaKnown RBP10.1□□□□□ -0.79
CMTM1-210ENST00000528441 PGBD4Q96DM1 585 aa10.1□□□□□ -0.79
CMTM1-210ENST00000528441 CDK5RAP3Q96JB5 506 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms