RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 STK33Q9BYT3 514 aa16.12■□□□□ 0.17
ECHDC1-220ENST00000528402 LACRTQ9GZZ8 138 aa16.12■□□□□ 0.17
ECHDC1-220ENST00000528402 BCAS3Q9H6U6 928 aa16.12■□□□□ 0.17
ECHDC1-220ENST00000528402 PDLIM7Q9NR12 457 aa16.12■□□□□ 0.17
ECHDC1-220ENST00000528402 GCNT4Q9P109 453 aa16.12■□□□□ 0.17
ECHDC1-220ENST00000528402 TSKSQ9UJT2 592 aa16.12■□□□□ 0.17
ECHDC1-220ENST00000528402 SAR1BQ9Y6B6 198 aa16.12■□□□□ 0.17
ECHDC1-220ENST00000528402 CTAGE15A4D2H0 777 aa16.11■□□□□ 0.17
ECHDC1-220ENST00000528402 IQCA1LA6NCM1 817 aa16.11■□□□□ 0.17
ECHDC1-220ENST00000528402 BTNL10A8MVZ5 291 aa16.11■□□□□ 0.17
ECHDC1-220ENST00000528402 ZNF263O14978 683 aa16.11■□□□□ 0.17
ECHDC1-220ENST00000528402 TLR2O60603 784 aa16.11■□□□□ 0.17
ECHDC1-220ENST00000528402 STBD1O95210 358 aa16.11■□□□□ 0.17
ECHDC1-220ENST00000528402 PLEKP08567 350 aaPredicted RBP16.11■□□□□ 0.17
ECHDC1-220ENST00000528402 CTAGE8P0CG41 777 aa16.11■□□□□ 0.17
ECHDC1-220ENST00000528402 CYP2J2P51589 502 aa16.11■□□□□ 0.17
ECHDC1-220ENST00000528402 PEX3P56589 373 aa16.11■□□□□ 0.17
ECHDC1-220ENST00000528402 CHMP4BP1P59074 171 aa16.11■□□□□ 0.17
ECHDC1-220ENST00000528402 CYP27A1Q02318 531 aa16.11■□□□□ 0.17
ECHDC1-220ENST00000528402 UTP14CQ5TAP6 766 aaKnown RBP16.11■□□□□ 0.17
ECHDC1-220ENST00000528402 CTAGE6Q86UF2 777 aa16.11■□□□□ 0.17
ECHDC1-220ENST00000528402 CTAGE4Q8IX94 777 aa16.11■□□□□ 0.17
ECHDC1-220ENST00000528402 IFT74Q96LB3 600 aa16.11■□□□□ 0.17
ECHDC1-220ENST00000528402 ELP3Q9H9T3 547 aa16.11■□□□□ 0.17
ECHDC1-220ENST00000528402 ATP6V0A4Q9HBG4 840 aa16.11■□□□□ 0.17
ECHDC1-220ENST00000528402 BTBD7Q9P203 1132 aa16.11■□□□□ 0.17
ECHDC1-220ENST00000528402 TBX20Q9UMR3 447 aa16.11■□□□□ 0.17
ECHDC1-220ENST00000528402 IGSF9BQ9UPX0 1349 aa16.11■□□□□ 0.17
ECHDC1-220ENST00000528402 KIAA0391O15091 583 aaKnown RBP16.11■□□□□ 0.17
ECHDC1-220ENST00000528402 ABL1P00519 1130 aa16.11■□□□□ 0.17
ECHDC1-220ENST00000528402 H2AFXP16104 143 aaPredicted RBP16.11■□□□□ 0.17
ECHDC1-220ENST00000528402 JAM2P57087 298 aa16.11■□□□□ 0.17
ECHDC1-220ENST00000528402 NAA30Q147X3 362 aaPredicted RBP16.11■□□□□ 0.17
ECHDC1-220ENST00000528402 IQCEQ6IPM2 695 aa16.11■□□□□ 0.17
ECHDC1-220ENST00000528402 MAEAQ7L5Y9 396 aa16.11■□□□□ 0.17
ECHDC1-220ENST00000528402 IRF2BP2Q7Z5L9 587 aa16.11■□□□□ 0.17
ECHDC1-220ENST00000528402 MAP4K3Q8IVH8 894 aa16.11■□□□□ 0.17
ECHDC1-220ENST00000528402 EXOC8Q8IYI6 725 aa16.11■□□□□ 0.17
ECHDC1-220ENST00000528402 OTUD5Q96G74 571 aa16.11■□□□□ 0.17
ECHDC1-220ENST00000528402 NOX5Q96PH1 765 aa16.11■□□□□ 0.17
ECHDC1-220ENST00000528402 ASCC2Q9H1I8 757 aaPredicted RBP16.11■□□□□ 0.17
ECHDC1-220ENST00000528402 SIX2Q9NPC8 291 aa16.11■□□□□ 0.17
ECHDC1-220ENST00000528402 KMT5AQ9NQR1 393 aa16.11■□□□□ 0.17
ECHDC1-220ENST00000528402 CYP26B1Q9NR63 512 aa16.11■□□□□ 0.17
ECHDC1-220ENST00000528402 NRBP2Q9NSY0 501 aa16.11■□□□□ 0.17
ECHDC1-220ENST00000528402 INTUQ9ULD6 942 aa16.11■□□□□ 0.17
ECHDC1-220ENST00000528402 USP20Q9Y2K6 914 aa16.11■□□□□ 0.17
ECHDC1-220ENST00000528402 MAFBQ9Y5Q3 323 aaPredicted RBP16.11■□□□□ 0.17
ECHDC1-220ENST00000528402 SCN4AP35499 1836 aa16.1■□□□□ 0.17
ECHDC1-220ENST00000528402 LCTP09848 1927 aa16.1■□□□□ 0.17
ECHDC1-220ENST00000528402 SLC16A4O15374 487 aa16.1■□□□□ 0.17
ECHDC1-220ENST00000528402 ATP8B1O43520 1251 aa16.1■□□□□ 0.17
ECHDC1-220ENST00000528402 ZNF862O60290 1169 aa16.1■□□□□ 0.17
ECHDC1-220ENST00000528402 NPTX2P47972 431 aa16.1■□□□□ 0.17
ECHDC1-220ENST00000528402 VAMP7P51809 220 aa16.1■□□□□ 0.17
ECHDC1-220ENST00000528402 NPEPPSP55786 919 aa16.1■□□□□ 0.17
ECHDC1-220ENST00000528402 TTLL12Q14166 644 aaPredicted RBP16.1■□□□□ 0.17
ECHDC1-220ENST00000528402 IFI16Q16666 785 aaKnown RBP16.1■□□□□ 0.17
ECHDC1-220ENST00000528402 PNMA8AQ86V59 439 aaPredicted RBP16.1■□□□□ 0.17
ECHDC1-220ENST00000528402 NCAPG2Q86XI2 1143 aa16.1■□□□□ 0.17
ECHDC1-220ENST00000528402 KSR1Q8IVT5 923 aa16.1■□□□□ 0.17
ECHDC1-220ENST00000528402 FAM133AQ8N9E0 248 aa16.1■□□□□ 0.17
ECHDC1-220ENST00000528402 TMEM161BQ8NDZ6 487 aa16.1■□□□□ 0.17
ECHDC1-220ENST00000528402 CCDC94Q9BW85 323 aaPredicted RBP16.1■□□□□ 0.17
ECHDC1-220ENST00000528402 NIFKQ9BYG3 293 aaKnown RBP16.1■□□□□ 0.17
ECHDC1-220ENST00000528402 ZNF302Q9NR11 478 aa16.1■□□□□ 0.17
ECHDC1-220ENST00000528402 HSPBP1Q9NZL4 362 aa16.1■□□□□ 0.17
ECHDC1-220ENST00000528402 ARID2Q68CP9 1835 aa16.09■□□□□ 0.17
ECHDC1-220ENST00000528402 IGKV6D-21A0A0A0MT36 114 aa16.09■□□□□ 0.17
ECHDC1-220ENST00000528402 RCCD1A6NED2 376 aa16.09■□□□□ 0.17
ECHDC1-220ENST00000528402 GLTPD2A6NH11 291 aa16.09■□□□□ 0.17
ECHDC1-220ENST00000528402 CCDC169A6NNP5 214 aa16.09■□□□□ 0.17
ECHDC1-220ENST00000528402 ACTN1P12814 892 aa16.09■□□□□ 0.17
ECHDC1-220ENST00000528402 YBX3P16989 372 aaKnown RBP eCLIP16.09■□□□□ 0.17
ECHDC1-220ENST00000528402 GARTP22102 1010 aa16.09■□□□□ 0.17
ECHDC1-220ENST00000528402 GTF2H1P32780 548 aa16.09■□□□□ 0.17
ECHDC1-220ENST00000528402 RFC5P40937 340 aa16.09■□□□□ 0.17
ECHDC1-220ENST00000528402 MYL7Q01449 175 aa16.09■□□□□ 0.17
ECHDC1-220ENST00000528402 GFPT1Q06210 699 aaPredicted RBP16.09■□□□□ 0.17
ECHDC1-220ENST00000528402 BMS1Q14692 1282 aaKnown RBP16.09■□□□□ 0.17
ECHDC1-220ENST00000528402 BRDTQ58F21 947 aaPredicted RBP16.09■□□□□ 0.17
ECHDC1-220ENST00000528402 FAM160B1Q5W0V3 765 aa16.09■□□□□ 0.17
ECHDC1-220ENST00000528402 PLA2G4FQ68DD2 849 aa16.09■□□□□ 0.17
ECHDC1-220ENST00000528402 SHCBP1Q8NEM2 672 aa16.09■□□□□ 0.17
ECHDC1-220ENST00000528402 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.09■□□□□ 0.17
ECHDC1-220ENST00000528402 MROH8Q9H579 483 aa16.09■□□□□ 0.17
ECHDC1-220ENST00000528402 KIAA1586Q9HCI6 787 aa16.09■□□□□ 0.17
ECHDC1-220ENST00000528402 TRIM10Q9UDY6 481 aa16.09■□□□□ 0.17
ECHDC1-220ENST00000528402 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.09■□□□□ 0.17
ECHDC1-220ENST00000528402 PNMA3Q9UL41 463 aa16.09■□□□□ 0.17
ECHDC1-220ENST00000528402 FHOD1Q9Y613 1164 aa16.09■□□□□ 0.17
ECHDC1-220ENST00000528402 V9GYY5 206 aaPredicted RBP16.09■□□□□ 0.17
ECHDC1-220ENST00000528402 TCP1P17987 556 aaKnown RBP16.08■□□□□ 0.16
ECHDC1-220ENST00000528402 PRKCEQ02156 737 aa16.08■□□□□ 0.16
ECHDC1-220ENST00000528402 CNTN2Q02246 1040 aa16.08■□□□□ 0.16
ECHDC1-220ENST00000528402 NAB2Q15742 525 aa16.08■□□□□ 0.16
ECHDC1-220ENST00000528402 CCDC60Q8IWA6 550 aaPredicted RBP16.08■□□□□ 0.16
ECHDC1-220ENST00000528402 TMC2Q8TDI7 906 aa16.08■□□□□ 0.16
ECHDC1-220ENST00000528402 AFAP1L1Q8TED9 768 aa16.08■□□□□ 0.16
ECHDC1-220ENST00000528402 RNF14Q9UBS8 474 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms