RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 SH3GL3Q99963 347 aa15.83■□□□□ 0.12
CAPN1-214ENST00000528165 TAOK3Q9H2K8 898 aa15.83■□□□□ 0.12
CAPN1-214ENST00000528165 IGSF9BQ9UPX0 1349 aa15.83■□□□□ 0.12
CAPN1-214ENST00000528165 TAF1P21675 1872 aa15.82■□□□□ 0.12
CAPN1-214ENST00000528165 HSPA6P17066 643 aa15.82■□□□□ 0.12
CAPN1-214ENST00000528165 PTGIRP43119 386 aa15.82■□□□□ 0.12
CAPN1-214ENST00000528165 UBE2SQ16763 222 aa15.82■□□□□ 0.12
CAPN1-214ENST00000528165 ALG3Q92685 438 aa15.82■□□□□ 0.12
CAPN1-214ENST00000528165 RUNDC3BQ96NL0 473 aa15.82■□□□□ 0.12
CAPN1-214ENST00000528165 UIMC1Q96RL1 719 aa15.82■□□□□ 0.12
CAPN1-214ENST00000528165 TRIM7Q9C029 511 aa15.82■□□□□ 0.12
CAPN1-214ENST00000528165 RXFP1Q9HBX9 757 aa15.82■□□□□ 0.12
CAPN1-214ENST00000528165 TMOD4Q9NZQ9 345 aa15.82■□□□□ 0.12
CAPN1-214ENST00000528165 ADAM22Q9P0K1 906 aa15.82■□□□□ 0.12
CAPN1-214ENST00000528165 PNMA3Q9UL41 463 aa15.82■□□□□ 0.12
CAPN1-214ENST00000528165 ZNF652Q9Y2D9 606 aa15.82■□□□□ 0.12
CAPN1-214ENST00000528165 SYNGAP1Q96PV0 1343 aa15.82■□□□□ 0.12
CAPN1-214ENST00000528165 PITPNM2Q9BZ72 1349 aa15.82■□□□□ 0.12
CAPN1-214ENST00000528165 TMEM120BA0PK00 339 aa15.82■□□□□ 0.12
CAPN1-214ENST00000528165 RARGP13631 454 aa15.82■□□□□ 0.12
CAPN1-214ENST00000528165 VCAM1P19320 739 aa15.82■□□□□ 0.12
CAPN1-214ENST00000528165 CDK8P49336 464 aa15.82■□□□□ 0.12
CAPN1-214ENST00000528165 OTUD6AQ7L8S5 288 aa15.82■□□□□ 0.12
CAPN1-214ENST00000528165 CEP95Q96GE4 821 aa15.82■□□□□ 0.12
CAPN1-214ENST00000528165 ENO4A6NNW6 628 aa15.81■□□□□ 0.12
CAPN1-214ENST00000528165 PLCG2P16885 1265 aa15.81■□□□□ 0.12
CAPN1-214ENST00000528165 RPL13P26373 211 aaKnown RBP15.81■□□□□ 0.12
CAPN1-214ENST00000528165 SOX5P35711 763 aa15.81■□□□□ 0.12
CAPN1-214ENST00000528165 BIRC2Q13490 618 aa15.81■□□□□ 0.12
CAPN1-214ENST00000528165 TAF11Q15544 211 aa15.81■□□□□ 0.12
CAPN1-214ENST00000528165 BRINP3Q76B58 766 aa15.81■□□□□ 0.12
CAPN1-214ENST00000528165 CCDC25Q86WR0 208 aa15.81■□□□□ 0.12
CAPN1-214ENST00000528165 ARHGEF2Q92974 986 aaKnown RBP15.81■□□□□ 0.12
CAPN1-214ENST00000528165 SLC35C1Q96A29 364 aa15.81■□□□□ 0.12
CAPN1-214ENST00000528165 MXD3Q9BW11 206 aa15.81■□□□□ 0.12
CAPN1-214ENST00000528165 ROPN1BQ9BZX4 212 aaPredicted RBP15.81■□□□□ 0.12
CAPN1-214ENST00000528165 ROPN1Q9HAT0 212 aaPredicted RBP15.81■□□□□ 0.12
CAPN1-214ENST00000528165 SEPT11Q9NVA2 429 aaKnown RBP15.81■□□□□ 0.12
CAPN1-214ENST00000528165 MAST2Q6P0Q8 1798 aa15.81■□□□□ 0.12
CAPN1-214ENST00000528165 FAM170AA1A519 330 aa15.81■□□□□ 0.12
CAPN1-214ENST00000528165 EME2A4GXA9 379 aaPredicted RBP15.81■□□□□ 0.12
CAPN1-214ENST00000528165 PDXKO00764 312 aa15.81■□□□□ 0.12
CAPN1-214ENST00000528165 GJB6O95452 261 aa15.81■□□□□ 0.12
CAPN1-214ENST00000528165 NR3C1P04150 777 aa15.81■□□□□ 0.12
CAPN1-214ENST00000528165 ARSHQ5FYA8 562 aa15.81■□□□□ 0.12
CAPN1-214ENST00000528165 ASRGL1Q7L266 308 aa15.81■□□□□ 0.12
CAPN1-214ENST00000528165 FITM2Q8N6M3 262 aa15.81■□□□□ 0.12
CAPN1-214ENST00000528165 FAM167BQ9BTA0 163 aa15.81■□□□□ 0.12
CAPN1-214ENST00000528165 PCYOX1Q9UHG3 505 aa15.81■□□□□ 0.12
CAPN1-214ENST00000528165 CCNG1P51959 295 aa15.81■□□□□ 0.12
CAPN1-214ENST00000528165 DIXDC1Q155Q3 683 aa15.81■□□□□ 0.12
CAPN1-214ENST00000528165 AADACL2Q6P093 401 aa15.81■□□□□ 0.12
CAPN1-214ENST00000528165 UBL4BQ8N7F7 174 aa15.81■□□□□ 0.12
CAPN1-214ENST00000528165 PRELID2Q8N945 189 aa15.81■□□□□ 0.12
CAPN1-214ENST00000528165 ANKRD42Q8N9B4 389 aa15.81■□□□□ 0.12
CAPN1-214ENST00000528165 ARHGEF26Q96DR7 871 aa15.81■□□□□ 0.12
CAPN1-214ENST00000528165 YIPF3Q9GZM5 350 aa15.81■□□□□ 0.12
CAPN1-214ENST00000528165 DHX36Q9H2U1 1008 aaKnown RBP15.81■□□□□ 0.12
CAPN1-214ENST00000528165 KCNK9Q9NPC2 374 aa15.81■□□□□ 0.12
CAPN1-214ENST00000528165 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.81■□□□□ 0.12
CAPN1-214ENST00000528165 TRIM33Q9UPN9 1127 aa15.81■□□□□ 0.12
CAPN1-214ENST00000528165 RTCBQ9Y3I0 505 aaKnown RBP15.81■□□□□ 0.12
CAPN1-214ENST00000528165 TRHP20396 242 aaPredicted RBP15.8■□□□□ 0.12
CAPN1-214ENST00000528165 LONRF1Q17RB8 773 aa15.8■□□□□ 0.12
CAPN1-214ENST00000528165 AP1ARQ63HQ0 302 aa15.8■□□□□ 0.12
CAPN1-214ENST00000528165 CCDC137Q6PK04 289 aaKnown RBP15.8■□□□□ 0.12
CAPN1-214ENST00000528165 SFR1Q86XK3 245 aa15.8■□□□□ 0.12
CAPN1-214ENST00000528165 ANKRD27Q96NW4 1050 aa15.8■□□□□ 0.12
CAPN1-214ENST00000528165 RAB3IPQ96QF0 476 aaPredicted RBP15.8■□□□□ 0.12
CAPN1-214ENST00000528165 ANKRD2Q9GZV1 360 aa15.8■□□□□ 0.12
CAPN1-214ENST00000528165 THAP2Q9H0W7 228 aa15.8■□□□□ 0.12
CAPN1-214ENST00000528165 SNED1Q8TER0 1413 aa15.8■□□□□ 0.12
CAPN1-214ENST00000528165 GTPBP10A4D1E9 387 aaKnown RBP15.8■□□□□ 0.12
CAPN1-214ENST00000528165 HGSO14964 777 aaPredicted RBP15.8■□□□□ 0.12
CAPN1-214ENST00000528165 SLC16A3O15427 465 aaKnown RBP15.8■□□□□ 0.12
CAPN1-214ENST00000528165 HIP1RO75146 1068 aa15.8■□□□□ 0.12
CAPN1-214ENST00000528165 ATP5DP30049 168 aa15.8■□□□□ 0.12
CAPN1-214ENST00000528165 CASP4P49662 377 aa15.8■□□□□ 0.12
CAPN1-214ENST00000528165 SLC12A3P55017 1021 aa15.8■□□□□ 0.12
CAPN1-214ENST00000528165 RPS8P62241 208 aaKnown RBP15.8■□□□□ 0.12
CAPN1-214ENST00000528165 GSTO1P78417 241 aa15.8■□□□□ 0.12
CAPN1-214ENST00000528165 C16orf86Q6ZW13 317 aa15.8■□□□□ 0.12
CAPN1-214ENST00000528165 KCNV2Q8TDN2 545 aa15.8■□□□□ 0.12
CAPN1-214ENST00000528165 NAF1Q96HR8 494 aaKnown RBP15.8■□□□□ 0.12
CAPN1-214ENST00000528165 MLXIPLQ9NP71 852 aa15.8■□□□□ 0.12
CAPN1-214ENST00000528165 KLHL14Q9P2G3 628 aa15.8■□□□□ 0.12
CAPN1-214ENST00000528165 PCDHB13Q9Y5F0 798 aa15.8■□□□□ 0.12
CAPN1-214ENST00000528165 HOXD13P35453 343 aa15.79■□□□□ 0.12
CAPN1-214ENST00000528165 MKRN4PQ13434 485 aaPredicted RBP15.79■□□□□ 0.12
CAPN1-214ENST00000528165 CCDC105Q8IYK2 499 aa15.79■□□□□ 0.12
CAPN1-214ENST00000528165 OSBPL1AQ9BXW6 950 aa15.79■□□□□ 0.12
CAPN1-214ENST00000528165 TYW1Q9NV66 732 aaKnown RBP15.79■□□□□ 0.12
CAPN1-214ENST00000528165 ZFATQ9P243 1243 aa15.79■□□□□ 0.12
CAPN1-214ENST00000528165 ALG6Q9Y672 507 aa15.79■□□□□ 0.12
CAPN1-214ENST00000528165 POTEFA5A3E0 1075 aa15.79■□□□□ 0.12
CAPN1-214ENST00000528165 MIF4GDA9UHW6 222 aaKnown RBP15.79■□□□□ 0.12
CAPN1-214ENST00000528165 WFS1O76024 890 aa15.79■□□□□ 0.12
CAPN1-214ENST00000528165 POTEIP0CG38 1075 aa15.79■□□□□ 0.12
CAPN1-214ENST00000528165 TNFAIP3P21580 790 aa15.79■□□□□ 0.12
CAPN1-214ENST00000528165 DRAP1Q14919 205 aaPredicted RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms