RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 IGHMBP2P38935 993 aaKnown RBP6.41□□□□□ -1.38
SVIP-202ENST00000525670 IARSP41252 1262 aaKnown RBP6.41□□□□□ -1.38
SVIP-202ENST00000525670 MC3RP41968 323 aa6.41□□□□□ -1.38
SVIP-202ENST00000525670 SF3B3Q15393 1217 aaKnown RBP6.41□□□□□ -1.38
SVIP-202ENST00000525670 C20orf194Q5TEA3 1177 aa6.41□□□□□ -1.38
SVIP-202ENST00000525670 ZKSCAN2Q63HK3 967 aa6.41□□□□□ -1.38
SVIP-202ENST00000525670 ATF7IPQ6VMQ6 1270 aa6.41□□□□□ -1.38
SVIP-202ENST00000525670 LIPIQ6XZB0 460 aa6.41□□□□□ -1.38
SVIP-202ENST00000525670 ANKRD44Q8N8A2 993 aa6.41□□□□□ -1.38
SVIP-202ENST00000525670 FAM169BQ8N8A8 192 aa6.41□□□□□ -1.38
SVIP-202ENST00000525670 BVESQ8NE79 360 aa6.41□□□□□ -1.38
SVIP-202ENST00000525670 USP33Q8TEY7 942 aa6.41□□□□□ -1.38
SVIP-202ENST00000525670 CPA5Q8WXQ8 436 aa6.41□□□□□ -1.38
SVIP-202ENST00000525670 COPS5Q92905 334 aa6.41□□□□□ -1.38
SVIP-202ENST00000525670 KIAA1522Q9P206 1035 aaPredicted RBP6.41□□□□□ -1.38
SVIP-202ENST00000525670 RCAN3Q9UKA8 241 aa6.41□□□□□ -1.38
SVIP-202ENST00000525670 INPP5FQ9Y2H2 1132 aa6.41□□□□□ -1.38
SVIP-202ENST00000525670 ATP6V0A2Q9Y487 856 aa6.41□□□□□ -1.38
SVIP-202ENST00000525670 SCN9AQ15858 1988 aa6.4□□□□□ -1.38
SVIP-202ENST00000525670 ANKRD18BA2A2Z9 1011 aa6.4□□□□□ -1.38
SVIP-202ENST00000525670 NOP56O00567 594 aaKnown RBP6.4□□□□□ -1.38
SVIP-202ENST00000525670 RAD17O75943 681 aa6.4□□□□□ -1.38
SVIP-202ENST00000525670 DDNO94850 711 aaPredicted RBP6.4□□□□□ -1.38
SVIP-202ENST00000525670 KCNH1O95259 989 aa6.4□□□□□ -1.38
SVIP-202ENST00000525670 CT47B1P0C2W7 299 aaPredicted RBP6.4□□□□□ -1.38
SVIP-202ENST00000525670 NAT2P11245 290 aa6.4□□□□□ -1.38
SVIP-202ENST00000525670 KCNJ4P48050 445 aa6.4□□□□□ -1.38
SVIP-202ENST00000525670 RPS8P62241 208 aaKnown RBP6.4□□□□□ -1.38
SVIP-202ENST00000525670 NCAPHQ15003 741 aa6.4□□□□□ -1.38
SVIP-202ENST00000525670 SKOR2Q2VWA4 1001 aaPredicted RBP6.4□□□□□ -1.38
SVIP-202ENST00000525670 SOGA3Q5TF21 947 aa6.4□□□□□ -1.38
SVIP-202ENST00000525670 NIM1KQ8IY84 436 aa6.4□□□□□ -1.38
SVIP-202ENST00000525670 KAZALD1Q96I82 304 aa6.4□□□□□ -1.38
SVIP-202ENST00000525670 CDC5LQ99459 802 aaKnown RBP6.4□□□□□ -1.38
SVIP-202ENST00000525670 MMP19Q99542 508 aa6.4□□□□□ -1.38
SVIP-202ENST00000525670 MPHOSPH8Q99549 860 aa6.4□□□□□ -1.38
SVIP-202ENST00000525670 PUS3Q9BZE2 481 aaKnown RBP6.4□□□□□ -1.38
SVIP-202ENST00000525670 ADAM7Q9H2U9 754 aa6.4□□□□□ -1.38
SVIP-202ENST00000525670 ACBD3Q9H3P7 528 aa6.4□□□□□ -1.38
SVIP-202ENST00000525670 BCAS3Q9H6U6 928 aa6.4□□□□□ -1.38
SVIP-202ENST00000525670 CNNM1Q9NRU3 951 aa6.4□□□□□ -1.38
SVIP-202ENST00000525670 APEX2Q9UBZ4 518 aa6.4□□□□□ -1.38
SVIP-202ENST00000525670 POLLQ9UGP5 575 aa6.4□□□□□ -1.38
SVIP-202ENST00000525670 PA2G4Q9UQ80 394 aaKnown RBP6.4□□□□□ -1.38
SVIP-202ENST00000525670 ADAMTSL1Q8N6G6 1762 aa6.39□□□□□ -1.39
SVIP-202ENST00000525670 SHTN1A0MZ66 631 aa6.39□□□□□ -1.39
SVIP-202ENST00000525670 FUCA1P04066 466 aa6.39□□□□□ -1.39
SVIP-202ENST00000525670 PLS3P13797 630 aa6.39□□□□□ -1.39
SVIP-202ENST00000525670 CCT4P50991 539 aaKnown RBP6.39□□□□□ -1.39
SVIP-202ENST00000525670 IRX6P78412 446 aaPredicted RBP6.39□□□□□ -1.39
SVIP-202ENST00000525670 CHRNDQ07001 517 aa6.39□□□□□ -1.39
SVIP-202ENST00000525670 IFIT5Q13325 482 aaKnown RBP6.39□□□□□ -1.39
SVIP-202ENST00000525670 CCDC57Q2TAC2 916 aa6.39□□□□□ -1.39
SVIP-202ENST00000525670 LRRC24Q50LG9 513 aa6.39□□□□□ -1.39
SVIP-202ENST00000525670 WWC2Q6AWC2 1192 aa6.39□□□□□ -1.39
SVIP-202ENST00000525670 RTKN2Q8IZC4 609 aa6.39□□□□□ -1.39
SVIP-202ENST00000525670 ADGRG2Q8IZP9 1017 aa6.39□□□□□ -1.39
SVIP-202ENST00000525670 TBC1D16Q8TBP0 767 aa6.39□□□□□ -1.39
SVIP-202ENST00000525670 JDP2Q8WYK2 163 aa6.39□□□□□ -1.39
SVIP-202ENST00000525670 ANAPC16Q96DE5 110 aa6.39□□□□□ -1.39
SVIP-202ENST00000525670 MXD3Q9BW11 206 aa6.39□□□□□ -1.39
SVIP-202ENST00000525670 USP44Q9H0E7 712 aa6.39□□□□□ -1.39
SVIP-202ENST00000525670 GPRC5CQ9NQ84 441 aa6.39□□□□□ -1.39
SVIP-202ENST00000525670 CYP26B1Q9NR63 512 aa6.39□□□□□ -1.39
SVIP-202ENST00000525670 CLEC1BQ9P126 229 aa6.39□□□□□ -1.39
SVIP-202ENST00000525670 A0A1B0GTL3 188 aa6.38□□□□□ -1.39
SVIP-202ENST00000525670 YDJCA8MPS7 323 aa6.38□□□□□ -1.39
SVIP-202ENST00000525670 IPO8O15397 1037 aaKnown RBP6.38□□□□□ -1.39
SVIP-202ENST00000525670 ECE2O60344 883 aa6.38□□□□□ -1.39
SVIP-202ENST00000525670 BBOX1O75936 387 aa6.38□□□□□ -1.39
SVIP-202ENST00000525670 NTRK1P04629 796 aa6.38□□□□□ -1.39
SVIP-202ENST00000525670 HSP90B1P14625 803 aaKnown RBP6.38□□□□□ -1.39
SVIP-202ENST00000525670 DLX2Q07687 328 aaPredicted RBP6.38□□□□□ -1.39
SVIP-202ENST00000525670 CACNB2Q08289 660 aaPredicted RBP6.38□□□□□ -1.39
SVIP-202ENST00000525670 SCRN1Q12765 414 aa6.38□□□□□ -1.39
SVIP-202ENST00000525670 ZFYVE27Q5T4F4 411 aa6.38□□□□□ -1.39
SVIP-202ENST00000525670 SMARCC2Q8TAQ2 1214 aa6.38□□□□□ -1.39
SVIP-202ENST00000525670 PLEKHO2Q8TD55 490 aa6.38□□□□□ -1.39
SVIP-202ENST00000525670 PSMD1Q99460 953 aa6.38□□□□□ -1.39
SVIP-202ENST00000525670 PLA2G12BQ9BX93 195 aa6.38□□□□□ -1.39
SVIP-202ENST00000525670 CCSER2Q9H7U1 834 aa6.38□□□□□ -1.39
SVIP-202ENST00000525670 XDHP47989 1333 aa6.38□□□□□ -1.39
SVIP-202ENST00000525670 MYH13Q9UKX3 1938 aa6.38□□□□□ -1.39
SVIP-202ENST00000525670 CEP350Q5VT06 3117 aa6.37□□□□□ -1.39
SVIP-202ENST00000525670 ZNF646O15015 1829 aaPredicted RBP6.37□□□□□ -1.39
SVIP-202ENST00000525670 WDR90Q96KV7 1748 aa6.37□□□□□ -1.39
SVIP-202ENST00000525670 RTL9Q8NET4 1388 aa6.37□□□□□ -1.39
SVIP-202ENST00000525670 KDM2BQ8NHM5 1336 aa6.37□□□□□ -1.39
SVIP-202ENST00000525670 UNCXA6NJT0 531 aa6.37□□□□□ -1.39
SVIP-202ENST00000525670 ATF4P18848 351 aaPredicted RBP6.37□□□□□ -1.39
SVIP-202ENST00000525670 METTL24Q5JXM2 366 aa6.37□□□□□ -1.39
SVIP-202ENST00000525670 GTF2IRD2BQ6EKJ0 949 aa6.37□□□□□ -1.39
SVIP-202ENST00000525670 LDHAL6AQ6ZMR3 332 aa6.37□□□□□ -1.39
SVIP-202ENST00000525670 PRRT2Q7Z6L0 340 aaPredicted RBP6.37□□□□□ -1.39
SVIP-202ENST00000525670 GTF2IRD2Q86UP8 949 aa6.37□□□□□ -1.39
SVIP-202ENST00000525670 TRIM59Q8IWR1 403 aa6.37□□□□□ -1.39
SVIP-202ENST00000525670 C16orf71Q8IYS4 520 aaPredicted RBP6.37□□□□□ -1.39
SVIP-202ENST00000525670 DPF3Q92784 378 aa6.37□□□□□ -1.39
SVIP-202ENST00000525670 MRGPRX3Q96LB0 322 aa6.37□□□□□ -1.39
SVIP-202ENST00000525670 SPATA25Q9BR10 227 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms