RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 RSAD2Q8WXG1 361 aa5.98□□□□□ -1.45
CD44-215ENST00000525241 HIST1H2AHQ96KK5 128 aa5.98□□□□□ -1.45
CD44-215ENST00000525241 WDR92Q96MX6 357 aa5.98□□□□□ -1.45
CD44-215ENST00000525241 HIST1H2AJQ99878 128 aa5.98□□□□□ -1.45
CD44-215ENST00000525241 CCDC8Q9H0W5 538 aaPredicted RBP5.98□□□□□ -1.45
CD44-215ENST00000525241 OR10A2Q9H208 303 aa5.98□□□□□ -1.45
CD44-215ENST00000525241 KCTD10Q9H3F6 313 aa5.98□□□□□ -1.45
CD44-215ENST00000525241 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.98□□□□□ -1.45
CD44-215ENST00000525241 SYNPO2Q9UMS6 1093 aa5.98□□□□□ -1.45
CD44-215ENST00000525241 USP18Q9UMW8 372 aa5.98□□□□□ -1.45
CD44-215ENST00000525241 CTDP1Q9Y5B0 961 aaPredicted RBP5.98□□□□□ -1.45
CD44-215ENST00000525241 SEC24DO94855 1032 aaPredicted RBP5.97□□□□□ -1.45
CD44-215ENST00000525241 GPR15P49685 360 aa5.97□□□□□ -1.45
CD44-215ENST00000525241 LGALS4P56470 323 aa5.97□□□□□ -1.45
CD44-215ENST00000525241 SESN2P58004 480 aaPredicted RBP5.97□□□□□ -1.45
CD44-215ENST00000525241 PPP2CBP62714 309 aa5.97□□□□□ -1.45
CD44-215ENST00000525241 PPP2CAP67775 309 aa5.97□□□□□ -1.45
CD44-215ENST00000525241 HGFACQ04756 655 aa5.97□□□□□ -1.45
CD44-215ENST00000525241 PPARAQ07869 468 aa5.97□□□□□ -1.45
CD44-215ENST00000525241 ITKQ08881 620 aa5.97□□□□□ -1.45
CD44-215ENST00000525241 KLF1Q13351 362 aaPredicted RBP5.97□□□□□ -1.45
CD44-215ENST00000525241 ADAM15Q13444 863 aa5.97□□□□□ -1.45
CD44-215ENST00000525241 NFYCQ13952 458 aa5.97□□□□□ -1.45
CD44-215ENST00000525241 RNF151Q2KHN1 245 aa5.97□□□□□ -1.45
CD44-215ENST00000525241 SYDE2Q5VT97 1194 aa5.97□□□□□ -1.45
CD44-215ENST00000525241 USP30Q70CQ3 517 aa5.97□□□□□ -1.45
CD44-215ENST00000525241 PLEKHH3Q7Z736 793 aa5.97□□□□□ -1.45
CD44-215ENST00000525241 GFM2Q969S9 779 aaKnown RBP5.97□□□□□ -1.45
CD44-215ENST00000525241 C20orf173Q96LM9 149 aa5.97□□□□□ -1.45
CD44-215ENST00000525241 TEPSINQ96N21 525 aa5.97□□□□□ -1.45
CD44-215ENST00000525241 FDXACB1Q9BRP7 624 aaPredicted RBP5.97□□□□□ -1.45
CD44-215ENST00000525241 OSBPL6Q9BZF3 934 aa5.97□□□□□ -1.45
CD44-215ENST00000525241 HOMER2Q9NSB8 354 aa5.97□□□□□ -1.45
CD44-215ENST00000525241 EVLQ9UI08 416 aaPredicted RBP5.97□□□□□ -1.45
CD44-215ENST00000525241 TRHDEQ9UKU6 1024 aa5.97□□□□□ -1.45
CD44-215ENST00000525241 EDARQ9UNE0 448 aa5.97□□□□□ -1.45
CD44-215ENST00000525241 C2orf78A6NCI8 922 aa5.96□□□□□ -1.46
CD44-215ENST00000525241 ARHGAP6O43182 974 aa5.96□□□□□ -1.46
CD44-215ENST00000525241 H2AFYO75367 372 aaKnown RBP5.96□□□□□ -1.46
CD44-215ENST00000525241 HNRNPLP14866 589 aaKnown RBP eCLIP5.96□□□□□ -1.46
CD44-215ENST00000525241 EPHB4P54760 987 aa5.96□□□□□ -1.46
CD44-215ENST00000525241 SURF1Q15526 300 aa5.96□□□□□ -1.46
CD44-215ENST00000525241 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.96□□□□□ -1.46
CD44-215ENST00000525241 TBC1D10BQ4KMP7 808 aaPredicted RBP5.96□□□□□ -1.46
CD44-215ENST00000525241 BRDTQ58F21 947 aaPredicted RBP5.96□□□□□ -1.46
CD44-215ENST00000525241 GAREM2Q75VX8 874 aa5.96□□□□□ -1.46
CD44-215ENST00000525241 KCNK18Q7Z418 384 aa5.96□□□□□ -1.46
CD44-215ENST00000525241 CLEC14AQ86T13 490 aa5.96□□□□□ -1.46
CD44-215ENST00000525241 OR14C36Q8NHC7 312 aa5.96□□□□□ -1.46
CD44-215ENST00000525241 RTEL1Q9NZ71 1219 aa5.96□□□□□ -1.46
CD44-215ENST00000525241 FAM184BQ9ULE4 1060 aa5.96□□□□□ -1.46
CD44-215ENST00000525241 WASHC2AQ641Q2 1341 aa5.96□□□□□ -1.46
CD44-215ENST00000525241 MATN2O00339 956 aa5.95□□□□□ -1.46
CD44-215ENST00000525241 GABRDO14764 452 aa5.95□□□□□ -1.46
CD44-215ENST00000525241 LAMTOR5O43504 91 aa5.95□□□□□ -1.46
CD44-215ENST00000525241 IARSP41252 1262 aaKnown RBP5.95□□□□□ -1.46
CD44-215ENST00000525241 MRPS9P82933 396 aaKnown RBP5.95□□□□□ -1.46
CD44-215ENST00000525241 CD69Q07108 199 aa5.95□□□□□ -1.46
CD44-215ENST00000525241 CCDC178Q5BJE1 867 aa5.95□□□□□ -1.46
CD44-215ENST00000525241 UBXN11Q5T124 520 aa5.95□□□□□ -1.46
CD44-215ENST00000525241 ARHGEF18Q6ZSZ5 1173 aa5.95□□□□□ -1.46
CD44-215ENST00000525241 STAG1Q8WVM7 1258 aa5.95□□□□□ -1.46
CD44-215ENST00000525241 CFHR4Q92496 578 aa5.95□□□□□ -1.46
CD44-215ENST00000525241 MTMR8Q96EF0 704 aa5.95□□□□□ -1.46
CD44-215ENST00000525241 RAX2Q96IS3 184 aa5.95□□□□□ -1.46
CD44-215ENST00000525241 PTPN18Q99952 460 aa5.95□□□□□ -1.46
CD44-215ENST00000525241 ASPSCR1Q9BZE9 553 aa5.95□□□□□ -1.46
CD44-215ENST00000525241 SEC61A2Q9H9S3 476 aa5.95□□□□□ -1.46
CD44-215ENST00000525241 CCM2LQ9NUG4 571 aaPredicted RBP5.95□□□□□ -1.46
CD44-215ENST00000525241 DPP7Q9UHL4 492 aa5.95□□□□□ -1.46
CD44-215ENST00000525241 RAPGEFL1Q9UHV5 662 aa5.95□□□□□ -1.46
CD44-215ENST00000525241 CDY2AQ9Y6F7 541 aa5.95□□□□□ -1.46
CD44-215ENST00000525241 TRIM75PA6NK02 468 aa5.94□□□□□ -1.46
CD44-215ENST00000525241 PLATP00750 562 aa5.94□□□□□ -1.46
CD44-215ENST00000525241 GAAP10253 952 aa5.94□□□□□ -1.46
CD44-215ENST00000525241 ADCY7P51828 1080 aa5.94□□□□□ -1.46
CD44-215ENST00000525241 SRSF2Q01130 221 aaKnown RBP5.94□□□□□ -1.46
CD44-215ENST00000525241 MAN2A1Q16706 1144 aa5.94□□□□□ -1.46
CD44-215ENST00000525241 ZNF568Q3ZCX4 644 aa5.94□□□□□ -1.46
CD44-215ENST00000525241 TOR2AQ5JU69 321 aa5.94□□□□□ -1.46
CD44-215ENST00000525241 OR14K1Q8NGZ2 314 aa5.94□□□□□ -1.46
CD44-215ENST00000525241 TSPEARQ8WU66 669 aa5.94□□□□□ -1.46
CD44-215ENST00000525241 LPPQ93052 612 aa5.94□□□□□ -1.46
CD44-215ENST00000525241 NEIL1Q96FI4 390 aaPredicted RBP5.94□□□□□ -1.46
CD44-215ENST00000525241 QRSL1Q9H0R6 528 aaKnown RBP5.94□□□□□ -1.46
CD44-215ENST00000525241 MEGF9Q9H1U4 602 aa5.94□□□□□ -1.46
CD44-215ENST00000525241 TYW1Q9NV66 732 aaKnown RBP5.94□□□□□ -1.46
CD44-215ENST00000525241 DDX56Q9NY93 547 aaKnown RBP5.94□□□□□ -1.46
CD44-215ENST00000525241 PPP4R1LQ9P1A2 415 aa5.94□□□□□ -1.46
CD44-215ENST00000525241 NR2E1Q9Y466 385 aa5.94□□□□□ -1.46
CD44-215ENST00000525241 A0A1W2PR48 441 aa5.93□□□□□ -1.46
CD44-215ENST00000525241 NRP2O60462 931 aa5.93□□□□□ -1.46
CD44-215ENST00000525241 FSBPO95073 299 aa5.93□□□□□ -1.46
CD44-215ENST00000525241 LY86O95711 162 aa5.93□□□□□ -1.46
CD44-215ENST00000525241 XPAP23025 273 aaPredicted RBP5.93□□□□□ -1.46
CD44-215ENST00000525241 MTNR1BP49286 362 aa5.93□□□□□ -1.46
CD44-215ENST00000525241 RAC3P60763 192 aa5.93□□□□□ -1.46
CD44-215ENST00000525241 ATP2C1P98194 919 aaPredicted RBP5.93□□□□□ -1.46
CD44-215ENST00000525241 SPIDRQ14159 915 aa5.93□□□□□ -1.46
CD44-215ENST00000525241 ACAP1Q15027 740 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms