RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 KBTBD4Q9NVX7 518 aa7.22□□□□□ -1.25
CD44-214ENST00000525211 DACT1Q9NYF0 836 aa7.22□□□□□ -1.25
CD44-214ENST00000525211 TCEAL9Q9UHQ7 104 aa7.22□□□□□ -1.25
CD44-214ENST00000525211 DBR1Q9UK59 544 aaKnown RBP7.22□□□□□ -1.25
CD44-214ENST00000525211 ZMYND8Q9ULU4 1186 aaPredicted RBP7.22□□□□□ -1.25
CD44-214ENST00000525211 DNM3Q9UQ16 869 aa7.22□□□□□ -1.25
CD44-214ENST00000525211 ARHGEF35A5YM69 484 aa7.21□□□□□ -1.26
CD44-214ENST00000525211 GPR32O75388 356 aa7.21□□□□□ -1.26
CD44-214ENST00000525211 CABYRO75952 493 aa7.21□□□□□ -1.26
CD44-214ENST00000525211 CTSHP09668 335 aa7.21□□□□□ -1.26
CD44-214ENST00000525211 IQCF3P0C7M6 154 aa7.21□□□□□ -1.26
CD44-214ENST00000525211 CYP2C18P33260 490 aa7.21□□□□□ -1.26
CD44-214ENST00000525211 ARL2P36404 184 aa7.21□□□□□ -1.26
CD44-214ENST00000525211 STAT6P42226 847 aa7.21□□□□□ -1.26
CD44-214ENST00000525211 SYKP43405 635 aa7.21□□□□□ -1.26
CD44-214ENST00000525211 SLC26A2P50443 739 aa7.21□□□□□ -1.26
CD44-214ENST00000525211 CASP5P51878 434 aa7.21□□□□□ -1.26
CD44-214ENST00000525211 EPHB4P54760 987 aa7.21□□□□□ -1.26
CD44-214ENST00000525211 CCL23P55773 120 aa7.21□□□□□ -1.26
CD44-214ENST00000525211 UBE2HP62256 183 aa7.21□□□□□ -1.26
CD44-214ENST00000525211 CAPSQ13938 189 aa7.21□□□□□ -1.26
CD44-214ENST00000525211 BRDTQ58F21 947 aaPredicted RBP7.21□□□□□ -1.26
CD44-214ENST00000525211 ZNF618Q5T7W0 954 aa7.21□□□□□ -1.26
CD44-214ENST00000525211 HAUS3Q68CZ6 603 aa7.21□□□□□ -1.26
CD44-214ENST00000525211 KRBA2Q6ZNG9 492 aa7.21□□□□□ -1.26
CD44-214ENST00000525211 TAS1R3Q7RTX0 852 aa7.21□□□□□ -1.26
CD44-214ENST00000525211 ANKRD33Q7Z3H0 272 aa7.21□□□□□ -1.26
CD44-214ENST00000525211 C7orf61Q8IZ16 206 aa7.21□□□□□ -1.26
CD44-214ENST00000525211 ERMNQ8TAM6 284 aa7.21□□□□□ -1.26
CD44-214ENST00000525211 PRPF31Q8WWY3 499 aaKnown RBP7.21□□□□□ -1.26
CD44-214ENST00000525211 LARP4BQ92615 738 aaKnown RBP7.21□□□□□ -1.26
CD44-214ENST00000525211 CALML4Q96GE6 196 aa7.21□□□□□ -1.26
CD44-214ENST00000525211 FAM167AQ96KS9 214 aa7.21□□□□□ -1.26
CD44-214ENST00000525211 REEP2Q9BRK0 252 aa7.21□□□□□ -1.26
CD44-214ENST00000525211 NOC4LQ9BVI4 516 aaKnown RBP7.21□□□□□ -1.26
CD44-214ENST00000525211 KATNAL1Q9BW62 490 aa7.21□□□□□ -1.26
CD44-214ENST00000525211 RAB34Q9BZG1 259 aa7.21□□□□□ -1.26
CD44-214ENST00000525211 PPP1R12CQ9BZL4 782 aa7.21□□□□□ -1.26
CD44-214ENST00000525211 POLR3FQ9H1D9 316 aaPredicted RBP7.21□□□□□ -1.26
CD44-214ENST00000525211 TUBE1Q9UJT0 475 aa7.21□□□□□ -1.26
CD44-214ENST00000525211 TBX21Q9UL17 535 aa7.21□□□□□ -1.26
CD44-214ENST00000525211 ZNF215Q9UL58 517 aaPredicted RBP7.21□□□□□ -1.26
CD44-214ENST00000525211 PCDHA2Q9Y5H9 948 aa7.21□□□□□ -1.26
CD44-214ENST00000525211 SIP14410 1827 aa7.21□□□□□ -1.26
CD44-214ENST00000525211 NRCAMQ92823 1304 aa7.21□□□□□ -1.26
CD44-214ENST00000525211 KDM3AQ9Y4C1 1321 aa7.21□□□□□ -1.26
CD44-214ENST00000525211 TET1Q8NFU7 2136 aa7.21□□□□□ -1.26
CD44-214ENST00000525211 COL1A2P08123 1366 aa7.2□□□□□ -1.26
CD44-214ENST00000525211 SCN5AQ14524 2016 aa7.2□□□□□ -1.26
CD44-214ENST00000525211 A0A087WZ62 844 aa7.2□□□□□ -1.26
CD44-214ENST00000525211 RRN3P2A6NIE6 340 aa7.2□□□□□ -1.26
CD44-214ENST00000525211 NBNO60934 754 aa7.2□□□□□ -1.26
CD44-214ENST00000525211 SLFN14P0C7P3 912 aa7.2□□□□□ -1.26
CD44-214ENST00000525211 CKBP12277 381 aa7.2□□□□□ -1.26
CD44-214ENST00000525211 XRCC6P12956 609 aaKnown RBP eCLIP7.2□□□□□ -1.26
CD44-214ENST00000525211 BMP6P22004 513 aa7.2□□□□□ -1.26
CD44-214ENST00000525211 MUTP22033 750 aa7.2□□□□□ -1.26
CD44-214ENST00000525211 DNAJB2P25686 324 aa7.2□□□□□ -1.26
CD44-214ENST00000525211 NMT1P30419 496 aaKnown RBP7.2□□□□□ -1.26
CD44-214ENST00000525211 POLGP54098 1239 aaPredicted RBP7.2□□□□□ -1.26
CD44-214ENST00000525211 FAM160A1Q05DH4 1040 aa7.2□□□□□ -1.26
CD44-214ENST00000525211 TBC1D8BQ0IIM8 1120 aa7.2□□□□□ -1.26
CD44-214ENST00000525211 DPYDQ12882 1025 aa7.2□□□□□ -1.26
CD44-214ENST00000525211 PTK7Q13308 1070 aa7.2□□□□□ -1.26
CD44-214ENST00000525211 PNOCQ13519 176 aa7.2□□□□□ -1.26
CD44-214ENST00000525211 KIZQ2M2Z5 673 aa7.2□□□□□ -1.26
CD44-214ENST00000525211 FAM102BQ5T8I3 360 aa7.2□□□□□ -1.26
CD44-214ENST00000525211 C1orf53Q5VUE5 145 aa7.2□□□□□ -1.26
CD44-214ENST00000525211 ISM2Q6H9L7 571 aa7.2□□□□□ -1.26
CD44-214ENST00000525211 METTL13Q8N6R0 699 aa7.2□□□□□ -1.26
CD44-214ENST00000525211 RASSF8Q8NHQ8 419 aa7.2□□□□□ -1.26
CD44-214ENST00000525211 CDK5RAP3Q96JB5 506 aa7.2□□□□□ -1.26
CD44-214ENST00000525211 PCMTD1Q96MG8 357 aaPredicted RBP7.2□□□□□ -1.26
CD44-214ENST00000525211 FDXACB1Q9BRP7 624 aaPredicted RBP7.2□□□□□ -1.26
CD44-214ENST00000525211 TRIM9Q9C026 710 aa7.2□□□□□ -1.26
CD44-214ENST00000525211 AGO3Q9H9G7 860 aaKnown RBP7.2□□□□□ -1.26
CD44-214ENST00000525211 FAM13BQ9NYF5 915 aa7.2□□□□□ -1.26
CD44-214ENST00000525211 TBC1D7Q9P0N9 293 aa7.2□□□□□ -1.26
CD44-214ENST00000525211 TMEM63CQ9P1W3 806 aa7.2□□□□□ -1.26
CD44-214ENST00000525211 KIAA1468Q9P260 1216 aa7.2□□□□□ -1.26
CD44-214ENST00000525211 SUCLA2Q9P2R7 463 aaPredicted RBP7.2□□□□□ -1.26
CD44-214ENST00000525211 CDY2AQ9Y6F7 541 aa7.2□□□□□ -1.26
CD44-214ENST00000525211 KAT6AQ92794 2004 aa7.19□□□□□ -1.26
CD44-214ENST00000525211 SMIM35A0A1B0GVV1 85 aa7.19□□□□□ -1.26
CD44-214ENST00000525211 TISP43B9A030 160 aa7.19□□□□□ -1.26
CD44-214ENST00000525211 ARHGAP33O14559 1287 aa7.19□□□□□ -1.26
CD44-214ENST00000525211 SLC16A4O15374 487 aa7.19□□□□□ -1.26
CD44-214ENST00000525211 B4GALT5O43286 388 aa7.19□□□□□ -1.26
CD44-214ENST00000525211 SLC26A4O43511 780 aa7.19□□□□□ -1.26
CD44-214ENST00000525211 MGEA5O60502 916 aa7.19□□□□□ -1.26
CD44-214ENST00000525211 SRGAP2CP0DJJ0 459 aa7.19□□□□□ -1.26
CD44-214ENST00000525211 MYBP10242 640 aa7.19□□□□□ -1.26
CD44-214ENST00000525211 GUCY2CP25092 1073 aa7.19□□□□□ -1.26
CD44-214ENST00000525211 HOXD13P35453 343 aa7.19□□□□□ -1.26
CD44-214ENST00000525211 THPOP40225 353 aa7.19□□□□□ -1.26
CD44-214ENST00000525211 RFC5P40937 340 aa7.19□□□□□ -1.26
CD44-214ENST00000525211 GPC3P51654 580 aa7.19□□□□□ -1.26
CD44-214ENST00000525211 EMP3P54852 163 aa7.19□□□□□ -1.26
CD44-214ENST00000525211 PEX3P56589 373 aa7.19□□□□□ -1.26
CD44-214ENST00000525211 NLRP11P59045 1033 aaKnown RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms