RNA–Protein interactions for RNA: ENST00000523952.5

PTPN12-216, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-216ENST00000523952 SPTBN2O15020 2390 aa10.57□□□□□ -0.72
PTPN12-216ENST00000523952 CCDC69A6NI79 296 aa10.57□□□□□ -0.72
PTPN12-216ENST00000523952 NARSO43776 548 aaKnown RBP10.57□□□□□ -0.72
PTPN12-216ENST00000523952 DDAH1O94760 285 aa10.57□□□□□ -0.72
PTPN12-216ENST00000523952 SSBP05455 408 aaKnown RBP eCLIP10.57□□□□□ -0.72
PTPN12-216ENST00000523952 DCNP07585 359 aaKnown RBP10.57□□□□□ -0.72
PTPN12-216ENST00000523952 CTSAP10619 480 aa10.57□□□□□ -0.72
PTPN12-216ENST00000523952 SMARCA1P28370 1054 aa10.57□□□□□ -0.72
PTPN12-216ENST00000523952 CLLU1OSQ5K130 101 aa10.57□□□□□ -0.72
PTPN12-216ENST00000523952 SWSAP1Q6NVH7 229 aa10.57□□□□□ -0.72
PTPN12-216ENST00000523952 DDX53Q86TM3 631 aaKnown RBP10.57□□□□□ -0.72
PTPN12-216ENST00000523952 DCLK2Q8N568 766 aa10.57□□□□□ -0.72
PTPN12-216ENST00000523952 GPR161Q8N6U8 529 aaKnown RBP10.57□□□□□ -0.72
PTPN12-216ENST00000523952 BBXQ8WY36 941 aaPredicted RBP10.57□□□□□ -0.72
PTPN12-216ENST00000523952 CHAMP1Q96JM3 812 aa10.57□□□□□ -0.72
PTPN12-216ENST00000523952 MAP3K14Q99558 947 aa10.57□□□□□ -0.72
PTPN12-216ENST00000523952 MYL10Q9BUA6 226 aa10.57□□□□□ -0.72
PTPN12-216ENST00000523952 GBP3Q9H0R5 595 aa10.57□□□□□ -0.72
PTPN12-216ENST00000523952 DLL3Q9NYJ7 618 aa10.57□□□□□ -0.72
PTPN12-216ENST00000523952 CDV3Q9UKY7 258 aaKnown RBP10.57□□□□□ -0.72
PTPN12-216ENST00000523952 SIT1Q9Y3P8 196 aa10.57□□□□□ -0.72
PTPN12-216ENST00000523952 MAGEB2O15479 319 aa10.56□□□□□ -0.72
PTPN12-216ENST00000523952 GPR32O75388 356 aa10.56□□□□□ -0.72
PTPN12-216ENST00000523952 ATG7O95352 703 aa10.56□□□□□ -0.72
PTPN12-216ENST00000523952 SP9P0CG40 484 aa10.56□□□□□ -0.72
PTPN12-216ENST00000523952 ARP10275 920 aa10.56□□□□□ -0.72
PTPN12-216ENST00000523952 SRFP11831 508 aa10.56□□□□□ -0.72
PTPN12-216ENST00000523952 EIF4BP23588 611 aaKnown RBP10.56□□□□□ -0.72
PTPN12-216ENST00000523952 CLCN3P51790 818 aa10.56□□□□□ -0.72
PTPN12-216ENST00000523952 ST3GAL2Q16842 350 aa10.56□□□□□ -0.72
PTPN12-216ENST00000523952 CEP55Q53EZ4 464 aa10.56□□□□□ -0.72
PTPN12-216ENST00000523952 KIAA0319Q5VV43 1072 aa10.56□□□□□ -0.72
PTPN12-216ENST00000523952 EFCAB12Q6NXP0 572 aa10.56□□□□□ -0.72
PTPN12-216ENST00000523952 GLB1LQ6UWU2 654 aa10.56□□□□□ -0.72
PTPN12-216ENST00000523952 C15orf39Q6ZRI6 1047 aa10.56□□□□□ -0.72
PTPN12-216ENST00000523952 C1orf210Q8IVY1 113 aa10.56□□□□□ -0.72
PTPN12-216ENST00000523952 CCDC60Q8IWA6 550 aaPredicted RBP10.56□□□□□ -0.72
PTPN12-216ENST00000523952 CMTR1Q8N1G2 835 aaKnown RBP10.56□□□□□ -0.72
PTPN12-216ENST00000523952 ZNF710Q8N1W2 664 aa10.56□□□□□ -0.72
PTPN12-216ENST00000523952 CCDC82Q8N4S0 544 aa10.56□□□□□ -0.72
PTPN12-216ENST00000523952 SLC22A17Q8WUG5 538 aa10.56□□□□□ -0.72
PTPN12-216ENST00000523952 NLRP7Q8WX94 980 aa10.56□□□□□ -0.72
PTPN12-216ENST00000523952 RSPH1Q8WYR4 309 aa10.56□□□□□ -0.72
PTPN12-216ENST00000523952 PIDD1Q9HB75 910 aa10.56□□□□□ -0.72
PTPN12-216ENST00000523952 AGO4Q9HCK5 861 aaKnown RBP10.56□□□□□ -0.72
PTPN12-216ENST00000523952 RNF19AQ9NV58 838 aa10.56□□□□□ -0.72
PTPN12-216ENST00000523952 STK39Q9UEW8 545 aa10.56□□□□□ -0.72
PTPN12-216ENST00000523952 DPP7Q9UHL4 492 aa10.56□□□□□ -0.72
PTPN12-216ENST00000523952 INPP5FQ9Y2H2 1132 aa10.56□□□□□ -0.72
PTPN12-216ENST00000523952 SAMM50Q9Y512 469 aa10.56□□□□□ -0.72
PTPN12-216ENST00000523952 IRAK3Q9Y616 596 aa10.56□□□□□ -0.72
PTPN12-216ENST00000523952 A0A0U1RQF3 1178 aa10.55□□□□□ -0.72
PTPN12-216ENST00000523952 hCG_1642624A0A1W2PR95 340 aa10.55□□□□□ -0.72
PTPN12-216ENST00000523952 KRBA1A5PL33 1030 aa10.55□□□□□ -0.72
PTPN12-216ENST00000523952 E7EWF7 191 aa10.55□□□□□ -0.72
PTPN12-216ENST00000523952 PLEKHA8P1O95397 391 aa10.55□□□□□ -0.72
PTPN12-216ENST00000523952 C22orf31O95567 290 aa10.55□□□□□ -0.72
PTPN12-216ENST00000523952 FOSP01100 380 aaPredicted RBP10.55□□□□□ -0.72
PTPN12-216ENST00000523952 CALM1P0DP23 149 aa10.55□□□□□ -0.72
PTPN12-216ENST00000523952 CALM2P0DP24 149 aa10.55□□□□□ -0.72
PTPN12-216ENST00000523952 CALM3P0DP25 149 aa10.55□□□□□ -0.72
PTPN12-216ENST00000523952 SKIP12755 728 aa10.55□□□□□ -0.72
PTPN12-216ENST00000523952 NAPAP54920 295 aa10.55□□□□□ -0.72
PTPN12-216ENST00000523952 ITGB3BPQ13352 177 aaPredicted RBP10.55□□□□□ -0.72
PTPN12-216ENST00000523952 HDAC1Q13547 482 aaPredicted RBP10.55□□□□□ -0.72
PTPN12-216ENST00000523952 PTPN14Q15678 1187 aa10.55□□□□□ -0.72
PTPN12-216ENST00000523952 TWF2Q6IBS0 349 aaKnown RBP10.55□□□□□ -0.72
PTPN12-216ENST00000523952 ABHD15Q6UXT9 468 aa10.55□□□□□ -0.72
PTPN12-216ENST00000523952 RUFY2Q8WXA3 655 aa10.55□□□□□ -0.72
PTPN12-216ENST00000523952 RSAD2Q8WXG1 361 aa10.55□□□□□ -0.72
PTPN12-216ENST00000523952 NXPE3Q969Y0 559 aa10.55□□□□□ -0.72
PTPN12-216ENST00000523952 IGSF21Q96ID5 467 aa10.55□□□□□ -0.72
PTPN12-216ENST00000523952 PGBD1Q96JS3 809 aa10.55□□□□□ -0.72
PTPN12-216ENST00000523952 ZNF668Q96K58 619 aaPredicted RBP10.55□□□□□ -0.72
PTPN12-216ENST00000523952 FAM193BQ96PV7 902 aaPredicted RBP10.55□□□□□ -0.72
PTPN12-216ENST00000523952 ARHGEF3Q9NR81 526 aa10.55□□□□□ -0.72
PTPN12-216ENST00000523952 MRPL17Q9NRX2 175 aaKnown RBP10.55□□□□□ -0.72
PTPN12-216ENST00000523952 CACNA1GO43497 2377 aa10.54□□□□□ -0.72
PTPN12-216ENST00000523952 IGKV6D-21A0A0A0MT36 114 aa10.54□□□□□ -0.72
PTPN12-216ENST00000523952 CCDC195A0A1B0GUA6 201 aa10.54□□□□□ -0.72
PTPN12-216ENST00000523952 LAMTOR5O43504 91 aa10.54□□□□□ -0.72
PTPN12-216ENST00000523952 PSAPP07602 524 aa10.54□□□□□ -0.72
PTPN12-216ENST00000523952 CYP21A2P08686 494 aa10.54□□□□□ -0.72
PTPN12-216ENST00000523952 CLCN4P51793 760 aa10.54□□□□□ -0.72
PTPN12-216ENST00000523952 LONRF3Q496Y0 759 aa10.54□□□□□ -0.72
PTPN12-216ENST00000523952 VARS2Q5ST30 1063 aaKnown RBP10.54□□□□□ -0.72
PTPN12-216ENST00000523952 PHLDB3Q6NSJ2 640 aa10.54□□□□□ -0.72
PTPN12-216ENST00000523952 DCLRE1AQ6PJP8 1040 aa10.54□□□□□ -0.72
PTPN12-216ENST00000523952 PLA2G4DQ86XP0 818 aa10.54□□□□□ -0.72
PTPN12-216ENST00000523952 PLEKHM2Q8IWE5 1019 aa10.54□□□□□ -0.72
PTPN12-216ENST00000523952 TMTC2Q8N394 836 aa10.54□□□□□ -0.72
PTPN12-216ENST00000523952 LRRC71Q8N4P6 559 aa10.54□□□□□ -0.72
PTPN12-216ENST00000523952 SRBD1Q8N5C6 995 aaKnown RBP10.54□□□□□ -0.72
PTPN12-216ENST00000523952 URGCPQ8TCY9 931 aa10.54□□□□□ -0.72
PTPN12-216ENST00000523952 GPR152Q8TDT2 470 aa10.54□□□□□ -0.72
PTPN12-216ENST00000523952 ATRIPQ8WXE1 791 aa10.54□□□□□ -0.72
PTPN12-216ENST00000523952 SHDQ96IW2 340 aa10.54□□□□□ -0.72
PTPN12-216ENST00000523952 FAM167AQ96KS9 214 aa10.54□□□□□ -0.72
PTPN12-216ENST00000523952 ANO3Q9BYT9 981 aa10.54□□□□□ -0.72
PTPN12-216ENST00000523952 MAN1C1Q9NR34 630 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms