RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 PKP1Q13835 747 aa13.93□□□□□ -0.18
VEGFA-225ENST00000523950 DSC3Q14574 896 aa13.93□□□□□ -0.18
VEGFA-225ENST00000523950 PPP2R5AQ15172 486 aa13.93□□□□□ -0.18
VEGFA-225ENST00000523950 SLC24A5Q71RS6 500 aa13.93□□□□□ -0.18
VEGFA-225ENST00000523950 NPAS4Q8IUM7 802 aa13.93□□□□□ -0.18
VEGFA-225ENST00000523950 KSR1Q8IVT5 923 aa13.93□□□□□ -0.18
VEGFA-225ENST00000523950 SYT2Q8N9I0 419 aaPredicted RBP13.93□□□□□ -0.18
VEGFA-225ENST00000523950 KRI1Q8N9T8 703 aaKnown RBP13.93□□□□□ -0.18
VEGFA-225ENST00000523950 RNF149Q8NC42 400 aa13.93□□□□□ -0.18
VEGFA-225ENST00000523950 KIFAP3Q92845 792 aa13.93□□□□□ -0.18
VEGFA-225ENST00000523950 CSRNP2Q9H175 543 aa13.93□□□□□ -0.18
VEGFA-225ENST00000523950 SLC28A3Q9HAS3 691 aa13.93□□□□□ -0.18
VEGFA-225ENST00000523950 IFT122Q9HBG6 1241 aa13.93□□□□□ -0.18
VEGFA-225ENST00000523950 DACT1Q9NYF0 836 aa13.93□□□□□ -0.18
VEGFA-225ENST00000523950 DAXXQ9UER7 740 aaPredicted RBP13.93□□□□□ -0.18
VEGFA-225ENST00000523950 CCDC39Q9UFE4 941 aa13.93□□□□□ -0.18
VEGFA-225ENST00000523950 YBX2Q9Y2T7 364 aaKnown RBP13.93□□□□□ -0.18
VEGFA-225ENST00000523950 ATP6V1DQ9Y5K8 247 aa13.93□□□□□ -0.18
VEGFA-225ENST00000523950 A0A087WWV3 80 aa13.92□□□□□ -0.18
VEGFA-225ENST00000523950 SPTLC2O15270 562 aa13.92□□□□□ -0.18
VEGFA-225ENST00000523950 SRGAP2CP0DJJ0 459 aa13.92□□□□□ -0.18
VEGFA-225ENST00000523950 GLRA2P23416 452 aa13.92□□□□□ -0.18
VEGFA-225ENST00000523950 NAMPTP43490 491 aa13.92□□□□□ -0.18
VEGFA-225ENST00000523950 PTENP60484 403 aa13.92□□□□□ -0.18
VEGFA-225ENST00000523950 GRIN1Q05586 938 aa13.92□□□□□ -0.18
VEGFA-225ENST00000523950 CAPSQ13938 189 aa13.92□□□□□ -0.18
VEGFA-225ENST00000523950 ZRSR1Q15695 479 aaKnown RBP13.92□□□□□ -0.18
VEGFA-225ENST00000523950 FOXD4L5Q5VV16 416 aaPredicted RBP13.92□□□□□ -0.18
VEGFA-225ENST00000523950 PPP2R2DQ66LE6 453 aa13.92□□□□□ -0.18
VEGFA-225ENST00000523950 RTN4RL1Q86UN2 441 aaPredicted RBP13.92□□□□□ -0.18
VEGFA-225ENST00000523950 RASSF8Q8NHQ8 419 aa13.92□□□□□ -0.18
VEGFA-225ENST00000523950 SP7Q8TDD2 431 aaPredicted RBP13.92□□□□□ -0.18
VEGFA-225ENST00000523950 KCNG4Q8TDN1 519 aa13.92□□□□□ -0.18
VEGFA-225ENST00000523950 ASAP3Q8TDY4 903 aa13.92□□□□□ -0.18
VEGFA-225ENST00000523950 FOXD4L4Q8WXT5 416 aaPredicted RBP13.92□□□□□ -0.18
VEGFA-225ENST00000523950 ZNF668Q96K58 619 aaPredicted RBP13.92□□□□□ -0.18
VEGFA-225ENST00000523950 ADAM2Q99965 735 aa13.92□□□□□ -0.18
VEGFA-225ENST00000523950 TRAIPQ9BWF2 469 aa13.92□□□□□ -0.18
VEGFA-225ENST00000523950 NKX2-4Q9H2Z4 354 aa13.92□□□□□ -0.18
VEGFA-225ENST00000523950 ZNF576Q9H609 170 aa13.92□□□□□ -0.18
VEGFA-225ENST00000523950 ELAC1Q9H777 363 aaKnown RBP13.92□□□□□ -0.18
VEGFA-225ENST00000523950 KCNG1Q9UIX4 513 aa13.92□□□□□ -0.18
VEGFA-225ENST00000523950 PHLPP2Q6ZVD8 1323 aa13.91□□□□□ -0.18
VEGFA-225ENST00000523950 C9IYK1 514 aa13.91□□□□□ -0.18
VEGFA-225ENST00000523950 MGEA5O60502 916 aa13.91□□□□□ -0.18
VEGFA-225ENST00000523950 CA3P07451 260 aa13.91□□□□□ -0.18
VEGFA-225ENST00000523950 PLA2G4BP0C869 781 aa13.91□□□□□ -0.18
VEGFA-225ENST00000523950 SKIP12755 728 aa13.91□□□□□ -0.18
VEGFA-225ENST00000523950 GUCY2CP25092 1073 aa13.91□□□□□ -0.18
VEGFA-225ENST00000523950 AXLP30530 894 aa13.91□□□□□ -0.18
VEGFA-225ENST00000523950 ANP32AP39687 249 aaKnown RBP13.91□□□□□ -0.18
VEGFA-225ENST00000523950 FAM189BP81408 668 aa13.91□□□□□ -0.18
VEGFA-225ENST00000523950 NCBP1Q09161 790 aaKnown RBP13.91□□□□□ -0.18
VEGFA-225ENST00000523950 FAM102BQ5T8I3 360 aa13.91□□□□□ -0.18
VEGFA-225ENST00000523950 RINT1Q6NUQ1 792 aa13.91□□□□□ -0.18
VEGFA-225ENST00000523950 CATSPER4Q7RTX7 472 aa13.91□□□□□ -0.18
VEGFA-225ENST00000523950 KCNK18Q7Z418 384 aa13.91□□□□□ -0.18
VEGFA-225ENST00000523950 ZBTB8OSQ8IWT0 167 aa13.91□□□□□ -0.18
VEGFA-225ENST00000523950 CRIPAKQ8N1N5 446 aa13.91□□□□□ -0.18
VEGFA-225ENST00000523950 DEFB123Q8N688 67 aa13.91□□□□□ -0.18
VEGFA-225ENST00000523950 RSPH1Q8WYR4 309 aa13.91□□□□□ -0.18
VEGFA-225ENST00000523950 IFT74Q96LB3 600 aa13.91□□□□□ -0.18
VEGFA-225ENST00000523950 DRC1Q96MC2 740 aa13.91□□□□□ -0.18
VEGFA-225ENST00000523950 YME1L1Q96TA2 773 aa13.91□□□□□ -0.18
VEGFA-225ENST00000523950 C2orf40Q9H1Z8 148 aa13.91□□□□□ -0.18
VEGFA-225ENST00000523950 SEMA6BQ9H3T3 888 aa13.91□□□□□ -0.18
VEGFA-225ENST00000523950 C17orf75Q9HAS0 396 aa13.91□□□□□ -0.18
VEGFA-225ENST00000523950 AGPAT5Q9NUQ2 364 aa13.91□□□□□ -0.18
VEGFA-225ENST00000523950 STK17AQ9UEE5 414 aa13.91□□□□□ -0.18
VEGFA-225ENST00000523950 RALGAPA2Q2PPJ7 1873 aa13.91□□□□□ -0.18
VEGFA-225ENST00000523950 LAMA3Q16787 3333 aa13.9□□□□□ -0.18
VEGFA-225ENST00000523950 CUTAO60888 179 aa13.9□□□□□ -0.18
VEGFA-225ENST00000523950 ERLIN2O94905 339 aa13.9□□□□□ -0.18
VEGFA-225ENST00000523950 UPP2O95045 317 aa13.9□□□□□ -0.18
VEGFA-225ENST00000523950 PLCG1P19174 1290 aa13.9□□□□□ -0.18
VEGFA-225ENST00000523950 SLC12A3P55017 1021 aa13.9□□□□□ -0.18
VEGFA-225ENST00000523950 NUCB2P80303 420 aa13.9□□□□□ -0.18
VEGFA-225ENST00000523950 KARSQ15046 597 aaKnown RBP13.9□□□□□ -0.18
VEGFA-225ENST00000523950 CDCA2Q69YH5 1023 aaPredicted RBP13.9□□□□□ -0.18
VEGFA-225ENST00000523950 C1orf186Q6ZWK4 172 aa13.9□□□□□ -0.18
VEGFA-225ENST00000523950 MAEAQ7L5Y9 396 aa13.9□□□□□ -0.18
VEGFA-225ENST00000523950 SYMPKQ92797 1274 aaKnown RBP13.9□□□□□ -0.18
VEGFA-225ENST00000523950 CCDC51Q96ER9 411 aa13.9□□□□□ -0.18
VEGFA-225ENST00000523950 PRIMPOLQ96LW4 560 aa13.9□□□□□ -0.18
VEGFA-225ENST00000523950 SAMD11Q96NU1 681 aa13.9□□□□□ -0.18
VEGFA-225ENST00000523950 TTYH1Q9H313 450 aaPredicted RBP13.9□□□□□ -0.18
VEGFA-225ENST00000523950 RC3H2Q9HBD1 1191 aaKnown RBP13.9□□□□□ -0.18
VEGFA-225ENST00000523950 GPRC5CQ9NQ84 441 aa13.9□□□□□ -0.18
VEGFA-225ENST00000523950 TMEM161AQ9NX61 479 aa13.9□□□□□ -0.18
VEGFA-225ENST00000523950 TFIP11Q9UBB9 837 aaKnown RBP13.9□□□□□ -0.18
VEGFA-225ENST00000523950 LRFN2Q9ULH4 789 aa13.9□□□□□ -0.18
VEGFA-225ENST00000523950 PCDHB7Q9Y5E2 793 aa13.9□□□□□ -0.18
VEGFA-225ENST00000523950 MYH11P35749 1972 aa13.9□□□□□ -0.18
VEGFA-225ENST00000523950 ADGRA3Q8IWK6 1321 aa13.9□□□□□ -0.19
VEGFA-225ENST00000523950 A0A0U1RQF3 1178 aa13.89□□□□□ -0.19
VEGFA-225ENST00000523950 LRRIQ4A6NIV6 560 aa13.89□□□□□ -0.19
VEGFA-225ENST00000523950 INO80B-WBP1J3KQ70 363 aa13.89□□□□□ -0.19
VEGFA-225ENST00000523950 HOXA2O43364 376 aa13.89□□□□□ -0.19
VEGFA-225ENST00000523950 DGKIO75912 1065 aa13.89□□□□□ -0.19
VEGFA-225ENST00000523950 MYOGP15173 224 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 226.4 ms