RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 SRGAP1Q7Z6B7 1085 aa19.25■□□□□ 0.67
CCNC-213ENST00000523541 ERMNQ8TAM6 284 aa19.25■□□□□ 0.67
CCNC-213ENST00000523541 PRPF31Q8WWY3 499 aaKnown RBP19.25■□□□□ 0.67
CCNC-213ENST00000523541 SH2D3AQ9BRG2 576 aa19.25■□□□□ 0.67
CCNC-213ENST00000523541 POLR3CQ9BUI4 534 aaPredicted RBP19.25■□□□□ 0.67
CCNC-213ENST00000523541 TMEM60Q9H2L4 133 aa19.25■□□□□ 0.67
CCNC-213ENST00000523541 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.25■□□□□ 0.67
CCNC-213ENST00000523541 COL4A3BPQ9Y5P4 624 aa19.25■□□□□ 0.67
CCNC-213ENST00000523541 MRPL42Q9Y6G3 142 aaKnown RBP19.25■□□□□ 0.67
CCNC-213ENST00000523541 REV3LO60673 3130 aa19.24■□□□□ 0.67
CCNC-213ENST00000523541 A0A087WZ62 844 aa19.24■□□□□ 0.67
CCNC-213ENST00000523541 TBKBP1A7MCY6 615 aa19.24■□□□□ 0.67
CCNC-213ENST00000523541 LAD1O00515 517 aa19.24■□□□□ 0.67
CCNC-213ENST00000523541 WNT7AO00755 349 aa19.24■□□□□ 0.67
CCNC-213ENST00000523541 OR52Z1P0C646 297 aa19.24■□□□□ 0.67
CCNC-213ENST00000523541 ATP2B1P20020 1258 aa19.24■□□□□ 0.67
CCNC-213ENST00000523541 GATMP50440 423 aa19.24■□□□□ 0.67
CCNC-213ENST00000523541 CYP4A11Q02928 519 aa19.24■□□□□ 0.67
CCNC-213ENST00000523541 PDIA5Q14554 519 aa19.24■□□□□ 0.67
CCNC-213ENST00000523541 RNF169Q8NCN4 708 aa19.24■□□□□ 0.67
CCNC-213ENST00000523541 FDXACB1Q9BRP7 624 aaPredicted RBP19.24■□□□□ 0.67
CCNC-213ENST00000523541 NSUN3Q9H649 340 aaKnown RBP19.24■□□□□ 0.67
CCNC-213ENST00000523541 UBE2ZQ9H832 354 aaPredicted RBP19.24■□□□□ 0.67
CCNC-213ENST00000523541 CARNS1A5YM72 827 aa19.23■□□□□ 0.67
CCNC-213ENST00000523541 KCNA5P22460 613 aa19.23■□□□□ 0.67
CCNC-213ENST00000523541 RPA1P27694 616 aa19.23■□□□□ 0.67
CCNC-213ENST00000523541 EMC2Q15006 297 aa19.23■□□□□ 0.67
CCNC-213ENST00000523541 ZNF174Q15697 407 aa19.23■□□□□ 0.67
CCNC-213ENST00000523541 ECHDC2Q86YB7 292 aa19.23■□□□□ 0.67
CCNC-213ENST00000523541 ZNF579Q8NAF0 562 aaKnown RBP19.23■□□□□ 0.67
CCNC-213ENST00000523541 NECAB3Q96P71 396 aaPredicted RBP19.23■□□□□ 0.67
CCNC-213ENST00000523541 NACC1Q96RE7 527 aa19.23■□□□□ 0.67
CCNC-213ENST00000523541 MTRQ99707 1265 aa19.23■□□□□ 0.67
CCNC-213ENST00000523541 RAB34Q9BZG1 259 aa19.23■□□□□ 0.67
CCNC-213ENST00000523541 TMEM117Q9H0C3 514 aa19.23■□□□□ 0.67
CCNC-213ENST00000523541 IFT122Q9HBG6 1241 aa19.23■□□□□ 0.67
CCNC-213ENST00000523541 DAXXQ9UER7 740 aaPredicted RBP19.23■□□□□ 0.67
CCNC-213ENST00000523541 PCDHB12Q9Y5F1 795 aa19.23■□□□□ 0.67
CCNC-213ENST00000523541 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.22■□□□□ 0.67
CCNC-213ENST00000523541 GRM6O15303 877 aa19.22■□□□□ 0.67
CCNC-213ENST00000523541 ZNF623O75123 536 aa19.22■□□□□ 0.67
CCNC-213ENST00000523541 BMP1P13497 986 aa19.22■□□□□ 0.67
CCNC-213ENST00000523541 TECP42680 631 aa19.22■□□□□ 0.67
CCNC-213ENST00000523541 FXR2P51116 673 aaKnown RBP eCLIP19.22■□□□□ 0.67
CCNC-213ENST00000523541 UBE3AQ05086 875 aa19.22■□□□□ 0.67
CCNC-213ENST00000523541 LAMTOR4Q0VGL1 99 aa19.22■□□□□ 0.67
CCNC-213ENST00000523541 TCEAL5Q5H9L2 206 aa19.22■□□□□ 0.67
CCNC-213ENST00000523541 FERMT3Q86UX7 667 aa19.22■□□□□ 0.67
CCNC-213ENST00000523541 ABI1Q8IZP0 508 aa19.22■□□□□ 0.67
CCNC-213ENST00000523541 C4orf32Q8N8J7 132 aa19.22■□□□□ 0.67
CCNC-213ENST00000523541 CCDC43Q96MW1 224 aaKnown RBP19.22■□□□□ 0.67
CCNC-213ENST00000523541 ALG13Q9NP73 1137 aaKnown RBP19.22■□□□□ 0.67
CCNC-213ENST00000523541 DBR1Q9UK59 544 aaKnown RBP19.22■□□□□ 0.67
CCNC-213ENST00000523541 PLAGL2Q9UPG8 496 aa19.22■□□□□ 0.67
CCNC-213ENST00000523541 TCF20Q9UGU0 1960 aaKnown RBP19.22■□□□□ 0.67
CCNC-213ENST00000523541 ZBTB39O15060 712 aa19.21■□□□□ 0.67
CCNC-213ENST00000523541 SPATA31C1P0DKV0 1188 aa19.21■□□□□ 0.67
CCNC-213ENST00000523541 FGFR4P22455 802 aa19.21■□□□□ 0.67
CCNC-213ENST00000523541 RARRES1P49788 294 aa19.21■□□□□ 0.67
CCNC-213ENST00000523541 RAB27AP51159 221 aa19.21■□□□□ 0.67
CCNC-213ENST00000523541 TFDP1Q14186 410 aa19.21■□□□□ 0.67
CCNC-213ENST00000523541 RILPL1Q5EBL4 403 aa19.21■□□□□ 0.67
CCNC-213ENST00000523541 FAM102BQ5T8I3 360 aa19.21■□□□□ 0.67
CCNC-213ENST00000523541 HAUS3Q68CZ6 603 aa19.21■□□□□ 0.67
CCNC-213ENST00000523541 CATSPER4Q7RTX7 472 aa19.21■□□□□ 0.67
CCNC-213ENST00000523541 CATSPER3Q86XQ3 398 aa19.21■□□□□ 0.67
CCNC-213ENST00000523541 TMEM143Q96AN5 459 aa19.21■□□□□ 0.67
CCNC-213ENST00000523541 NLRP4Q96MN2 994 aa19.21■□□□□ 0.67
CCNC-213ENST00000523541 NFKBIZQ9BYH8 718 aa19.21■□□□□ 0.67
CCNC-213ENST00000523541 POTEMA6NI47 508 aa19.2■□□□□ 0.66
CCNC-213ENST00000523541 SRGAP2CP0DJJ0 459 aa19.2■□□□□ 0.66
CCNC-213ENST00000523541 AXLP30530 894 aa19.2■□□□□ 0.66
CCNC-213ENST00000523541 PRPHP41219 470 aa19.2■□□□□ 0.66
CCNC-213ENST00000523541 NCBP1Q09161 790 aaKnown RBP19.2■□□□□ 0.66
CCNC-213ENST00000523541 ZNF598Q86UK7 904 aaKnown RBP19.2■□□□□ 0.66
CCNC-213ENST00000523541 IFNLR1Q8IU57 520 aaPredicted RBP19.2■□□□□ 0.66
CCNC-213ENST00000523541 KSR1Q8IVT5 923 aa19.2■□□□□ 0.66
CCNC-213ENST00000523541 MCPH1Q8NEM0 835 aa19.2■□□□□ 0.66
CCNC-213ENST00000523541 PPP2R3CQ969Q6 453 aa19.2■□□□□ 0.66
CCNC-213ENST00000523541 BACH2Q9BYV9 841 aa19.2■□□□□ 0.66
CCNC-213ENST00000523541 IGFLR1Q9H665 355 aa19.2■□□□□ 0.66
CCNC-213ENST00000523541 BMP2KQ9NSY1 1161 aaPredicted RBP19.2■□□□□ 0.66
CCNC-213ENST00000523541 TYW1Q9NV66 732 aaKnown RBP19.2■□□□□ 0.66
CCNC-213ENST00000523541 CLDND1Q9NY35 253 aa19.2■□□□□ 0.66
CCNC-213ENST00000523541 SMC3Q9UQE7 1217 aa19.2■□□□□ 0.66
CCNC-213ENST00000523541 H3BQV1 296 aa19.19■□□□□ 0.66
CCNC-213ENST00000523541 CSDE1O75534 798 aaKnown RBP19.19■□□□□ 0.66
CCNC-213ENST00000523541 FGFR1P11362 822 aa19.19■□□□□ 0.66
CCNC-213ENST00000523541 LAG3P18627 525 aa19.19■□□□□ 0.66
CCNC-213ENST00000523541 GJB2P29033 226 aa19.19■□□□□ 0.66
CCNC-213ENST00000523541 ARL2P36404 184 aa19.19■□□□□ 0.66
CCNC-213ENST00000523541 PHKA2P46019 1235 aa19.19■□□□□ 0.66
CCNC-213ENST00000523541 TOB1P50616 345 aaPredicted RBP19.19■□□□□ 0.66
CCNC-213ENST00000523541 COL19A1Q14993 1142 aa19.19■□□□□ 0.66
CCNC-213ENST00000523541 PDE12Q6L8Q7 609 aaKnown RBP19.19■□□□□ 0.66
CCNC-213ENST00000523541 KCTD17Q8N5Z5 321 aa19.19■□□□□ 0.66
CCNC-213ENST00000523541 KLHL23Q8NBE8 558 aa19.19■□□□□ 0.66
CCNC-213ENST00000523541 SPPL3Q8TCT6 385 aa19.19■□□□□ 0.66
CCNC-213ENST00000523541 CASD1Q96PB1 797 aa19.19■□□□□ 0.66
CCNC-213ENST00000523541 MRPL9Q9BYD2 267 aaKnown RBP19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms