RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 LRRC53A6NM62 1247 aa9.05□□□□□ -0.96
CSMD1-213ENST00000523488 YY1P25490 414 aa9.05□□□□□ -0.96
CSMD1-213ENST00000523488 RASSF7Q02833 373 aa9.05□□□□□ -0.96
CSMD1-213ENST00000523488 CDK18Q07002 472 aa9.05□□□□□ -0.96
CSMD1-213ENST00000523488 BTG3Q14201 252 aaPredicted RBP9.05□□□□□ -0.96
CSMD1-213ENST00000523488 ZRSR2Q15696 482 aaKnown RBP9.05□□□□□ -0.96
CSMD1-213ENST00000523488 CCDC6Q16204 474 aa9.05□□□□□ -0.96
CSMD1-213ENST00000523488 MUM1Q2TAK8 710 aa9.05□□□□□ -0.96
CSMD1-213ENST00000523488 DCAF12L1Q5VU92 463 aa9.05□□□□□ -0.96
CSMD1-213ENST00000523488 ZNF276Q8N554 614 aa9.05□□□□□ -0.96
CSMD1-213ENST00000523488 KCNH5Q8NCM2 988 aa9.05□□□□□ -0.96
CSMD1-213ENST00000523488 XAGE3Q8WTP9 111 aa9.05□□□□□ -0.96
CSMD1-213ENST00000523488 DDX17Q92841 729 aaKnown RBP9.05□□□□□ -0.96
CSMD1-213ENST00000523488 MAGEB18Q96M61 343 aa9.05□□□□□ -0.96
CSMD1-213ENST00000523488 IWS1Q96ST2 819 aa9.05□□□□□ -0.96
CSMD1-213ENST00000523488 TRIM9Q9C026 710 aa9.05□□□□□ -0.96
CSMD1-213ENST00000523488 DLGAP2Q9P1A6 1054 aa9.05□□□□□ -0.96
CSMD1-213ENST00000523488 ZMYND8Q9ULU4 1186 aaPredicted RBP9.05□□□□□ -0.96
CSMD1-213ENST00000523488 NEU2Q9Y3R4 380 aa9.05□□□□□ -0.96
CSMD1-213ENST00000523488 LTBP4Q8N2S1 1624 aa9.05□□□□□ -0.96
CSMD1-213ENST00000523488 FAM205CA6NFA0 338 aa9.05□□□□□ -0.96
CSMD1-213ENST00000523488 A8MUI8 341 aa9.05□□□□□ -0.96
CSMD1-213ENST00000523488 TJP3O95049 919 aa9.05□□□□□ -0.96
CSMD1-213ENST00000523488 GNAT2P19087 354 aa9.05□□□□□ -0.96
CSMD1-213ENST00000523488 CRABP2P29373 138 aa9.05□□□□□ -0.96
CSMD1-213ENST00000523488 RAP1GDS1P52306 607 aa9.05□□□□□ -0.96
CSMD1-213ENST00000523488 RAD23BP54727 409 aa9.05□□□□□ -0.96
CSMD1-213ENST00000523488 NLRP5P59047 1200 aa9.05□□□□□ -0.96
CSMD1-213ENST00000523488 AP1B1Q10567 949 aa9.05□□□□□ -0.96
CSMD1-213ENST00000523488 SPIDRQ14159 915 aa9.05□□□□□ -0.96
CSMD1-213ENST00000523488 RTN1Q16799 776 aa9.05□□□□□ -0.96
CSMD1-213ENST00000523488 ACBD5Q5T8D3 534 aaPredicted RBP9.05□□□□□ -0.96
CSMD1-213ENST00000523488 GALNT17Q6IS24 598 aa9.05□□□□□ -0.96
CSMD1-213ENST00000523488 TMTC3Q6ZXV5 915 aa9.05□□□□□ -0.96
CSMD1-213ENST00000523488 TDRPQ86YL5 185 aa9.05□□□□□ -0.96
CSMD1-213ENST00000523488 DIS3LQ8TF46 1054 aaKnown RBP9.05□□□□□ -0.96
CSMD1-213ENST00000523488 LRRC59Q96AG4 307 aaKnown RBP9.05□□□□□ -0.96
CSMD1-213ENST00000523488 GBP5Q96PP8 586 aa9.05□□□□□ -0.96
CSMD1-213ENST00000523488 NOC4LQ9BVI4 516 aaKnown RBP9.05□□□□□ -0.96
CSMD1-213ENST00000523488 ZNF341Q9BYN7 854 aa9.05□□□□□ -0.96
CSMD1-213ENST00000523488 DCLRE1BQ9H816 532 aa9.05□□□□□ -0.96
CSMD1-213ENST00000523488 SCOCQ9UIL1 159 aa9.05□□□□□ -0.96
CSMD1-213ENST00000523488 FER1L6Q2WGJ9 1857 aa9.05□□□□□ -0.96
CSMD1-213ENST00000523488 TRIM64BA6NI03 449 aa9.05□□□□□ -0.96
CSMD1-213ENST00000523488 PGRMC1O00264 195 aaKnown RBP9.05□□□□□ -0.96
CSMD1-213ENST00000523488 LTKP29376 864 aa9.05□□□□□ -0.96
CSMD1-213ENST00000523488 STAT6P42226 847 aa9.05□□□□□ -0.96
CSMD1-213ENST00000523488 PLCB3Q01970 1234 aa9.05□□□□□ -0.96
CSMD1-213ENST00000523488 ITGA9Q13797 1035 aa9.05□□□□□ -0.96
CSMD1-213ENST00000523488 SIX1Q15475 284 aaPredicted RBP9.05□□□□□ -0.96
CSMD1-213ENST00000523488 RASIP1Q5U651 963 aa9.05□□□□□ -0.96
CSMD1-213ENST00000523488 MYLK4Q86YV6 388 aaPredicted RBP9.05□□□□□ -0.96
CSMD1-213ENST00000523488 TTC5Q8N0Z6 440 aa9.05□□□□□ -0.96
CSMD1-213ENST00000523488 TPCN2Q8NHX9 752 aa9.05□□□□□ -0.96
CSMD1-213ENST00000523488 LY75O60449 1722 aa9.04□□□□□ -0.96
CSMD1-213ENST00000523488 B4E1Z4 1266 aa9.04□□□□□ -0.96
CSMD1-213ENST00000523488 CETN3O15182 167 aa9.04□□□□□ -0.96
CSMD1-213ENST00000523488 PRPF4O43172 522 aaKnown RBP eCLIP9.04□□□□□ -0.96
CSMD1-213ENST00000523488 SUN1O94901 812 aa9.04□□□□□ -0.96
CSMD1-213ENST00000523488 GGPS1O95749 300 aa9.04□□□□□ -0.96
CSMD1-213ENST00000523488 FTCDO95954 541 aa9.04□□□□□ -0.96
CSMD1-213ENST00000523488 KLRC1P26715 233 aa9.04□□□□□ -0.96
CSMD1-213ENST00000523488 GPSM2P81274 684 aa9.04□□□□□ -0.96
CSMD1-213ENST00000523488 DHX9Q08211 1270 aaKnown RBP9.04□□□□□ -0.96
CSMD1-213ENST00000523488 KPNB1Q14974 876 aaKnown RBP9.04□□□□□ -0.96
CSMD1-213ENST00000523488 TMEM63BQ5T3F8 832 aa9.04□□□□□ -0.96
CSMD1-213ENST00000523488 CYFIP1Q7L576 1253 aa9.04□□□□□ -0.96
CSMD1-213ENST00000523488 CADPS2Q86UW7 1296 aa9.04□□□□□ -0.96
CSMD1-213ENST00000523488 ECHDC2Q86YB7 292 aa9.04□□□□□ -0.96
CSMD1-213ENST00000523488 CSGALNACT2Q8N6G5 542 aa9.04□□□□□ -0.96
CSMD1-213ENST00000523488 CEP63Q96MT8 703 aa9.04□□□□□ -0.96
CSMD1-213ENST00000523488 ZNF232Q9UNY5 417 aa9.04□□□□□ -0.96
CSMD1-213ENST00000523488 ZNF335Q9H4Z2 1342 aaPredicted RBP9.04□□□□□ -0.96
CSMD1-213ENST00000523488 A0A1B0GVG6 124 aa9.04□□□□□ -0.96
CSMD1-213ENST00000523488 CCDC169A6NNP5 214 aa9.04□□□□□ -0.96
CSMD1-213ENST00000523488 F8W8V4 182 aa9.04□□□□□ -0.96
CSMD1-213ENST00000523488 ABCD1P33897 745 aa9.04□□□□□ -0.96
CSMD1-213ENST00000523488 ACADVLP49748 655 aa9.04□□□□□ -0.96
CSMD1-213ENST00000523488 ZNF174Q15697 407 aa9.04□□□□□ -0.96
CSMD1-213ENST00000523488 PFKFB3Q16875 520 aaPredicted RBP9.04□□□□□ -0.96
CSMD1-213ENST00000523488 OPTNQ96CV9 577 aa9.04□□□□□ -0.96
CSMD1-213ENST00000523488 MYLK2Q9H1R3 596 aa9.04□□□□□ -0.96
CSMD1-213ENST00000523488 VCX3BQ9H321 246 aa9.04□□□□□ -0.96
CSMD1-213ENST00000523488 OCEL1Q9H607 264 aa9.04□□□□□ -0.96
CSMD1-213ENST00000523488 TMEM165Q9HC07 324 aa9.04□□□□□ -0.96
CSMD1-213ENST00000523488 VCX3AQ9NNX9 186 aa9.04□□□□□ -0.96
CSMD1-213ENST00000523488 TXLNGQ9NUQ3 528 aa9.04□□□□□ -0.96
CSMD1-213ENST00000523488 USP40Q9NVE5 1235 aa9.04□□□□□ -0.96
CSMD1-213ENST00000523488 BIN2Q9UBW5 565 aaPredicted RBP9.04□□□□□ -0.96
CSMD1-213ENST00000523488 SUN2Q9UH99 717 aa9.04□□□□□ -0.96
CSMD1-213ENST00000523488 PNMA2Q9UL42 364 aa9.04□□□□□ -0.96
CSMD1-213ENST00000523488 STRCQ7RTU9 1775 aa9.04□□□□□ -0.96
CSMD1-213ENST00000523488 MAGEA13PA6NCF6 341 aa9.04□□□□□ -0.96
CSMD1-213ENST00000523488 CEP104O60308 925 aa9.04□□□□□ -0.96
CSMD1-213ENST00000523488 PFDN1O60925 122 aa9.04□□□□□ -0.96
CSMD1-213ENST00000523488 SHBGP04278 402 aa9.04□□□□□ -0.96
CSMD1-213ENST00000523488 RARGP13631 454 aa9.04□□□□□ -0.96
CSMD1-213ENST00000523488 RAB15P59190 212 aa9.04□□□□□ -0.96
CSMD1-213ENST00000523488 MAP3K10Q02779 954 aa9.04□□□□□ -0.96
CSMD1-213ENST00000523488 PTGDRQ13258 359 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms