RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 MAFO75444 373 aaPredicted RBP10.29□□□□□ -0.76
SDCBP-212ENST00000523483 CAVIN2O95810 425 aa10.29□□□□□ -0.76
SDCBP-212ENST00000523483 HSPA8P11142 646 aaKnown RBP10.29□□□□□ -0.76
SDCBP-212ENST00000523483 GLRA2P23416 452 aa10.29□□□□□ -0.76
SDCBP-212ENST00000523483 RFC5P40937 340 aa10.29□□□□□ -0.76
SDCBP-212ENST00000523483 PRMT2P55345 433 aa10.29□□□□□ -0.76
SDCBP-212ENST00000523483 HS2ST1Q7LGA3 356 aa10.29□□□□□ -0.76
SDCBP-212ENST00000523483 ZNF720Q7Z2F6 126 aa10.29□□□□□ -0.76
SDCBP-212ENST00000523483 KATNAL1Q9BW62 490 aa10.29□□□□□ -0.76
SDCBP-212ENST00000523483 SEMA6BQ9H3T3 888 aa10.29□□□□□ -0.76
SDCBP-212ENST00000523483 NRBP1Q9UHY1 535 aa10.29□□□□□ -0.76
SDCBP-212ENST00000523483 CLSTN1O94985 981 aa10.28□□□□□ -0.76
SDCBP-212ENST00000523483 NLRP11P59045 1033 aaKnown RBP10.28□□□□□ -0.76
SDCBP-212ENST00000523483 LAMTOR4Q0VGL1 99 aa10.28□□□□□ -0.76
SDCBP-212ENST00000523483 TARBP2Q15633 366 aaKnown RBP10.28□□□□□ -0.76
SDCBP-212ENST00000523483 GUF1Q8N442 669 aaKnown RBP10.28□□□□□ -0.76
SDCBP-212ENST00000523483 DNAJB3Q8WWF6 145 aa10.28□□□□□ -0.76
SDCBP-212ENST00000523483 MED15Q96RN5 788 aa10.28□□□□□ -0.76
SDCBP-212ENST00000523483 MMRN2Q9H8L6 949 aa10.28□□□□□ -0.76
SDCBP-212ENST00000523483 MAGEC2Q9UBF1 373 aaPredicted RBP10.28□□□□□ -0.76
SDCBP-212ENST00000523483 FSD2A1L4K1 749 aa10.28□□□□□ -0.76
SDCBP-212ENST00000523483 K7ERI5 159 aa10.28□□□□□ -0.76
SDCBP-212ENST00000523483 ADAMTS4O75173 837 aa10.28□□□□□ -0.76
SDCBP-212ENST00000523483 CCL5P13501 91 aa10.28□□□□□ -0.76
SDCBP-212ENST00000523483 PRKCSHP14314 528 aaPredicted RBP10.28□□□□□ -0.76
SDCBP-212ENST00000523483 CCNE1P24864 410 aa10.28□□□□□ -0.76
SDCBP-212ENST00000523483 CTCFP49711 727 aaPredicted RBP10.28□□□□□ -0.76
SDCBP-212ENST00000523483 STRN3Q13033 797 aa10.28□□□□□ -0.76
SDCBP-212ENST00000523483 ZNF484Q5JVG2 852 aa10.28□□□□□ -0.76
SDCBP-212ENST00000523483 MTHFD1LQ6UB35 978 aa10.28□□□□□ -0.76
SDCBP-212ENST00000523483 CTU1Q7Z7A3 348 aaKnown RBP10.28□□□□□ -0.76
SDCBP-212ENST00000523483 PCSK9Q8NBP7 692 aaKnown RBP10.28□□□□□ -0.76
SDCBP-212ENST00000523483 SPC24Q8NBT2 197 aa10.28□□□□□ -0.76
SDCBP-212ENST00000523483 OLFML3Q9NRN5 406 aa10.28□□□□□ -0.76
SDCBP-212ENST00000523483 ADGRA3Q8IWK6 1321 aa10.28□□□□□ -0.76
SDCBP-212ENST00000523483 KAT6AQ92794 2004 aa10.28□□□□□ -0.76
SDCBP-212ENST00000523483 ZNF236Q9UL36 1845 aa10.28□□□□□ -0.76
SDCBP-212ENST00000523483 BICDL2A1A5D9 508 aa10.27□□□□□ -0.76
SDCBP-212ENST00000523483 FRMD3A2A2Y4 597 aa10.27□□□□□ -0.76
SDCBP-212ENST00000523483 C17orf102A2RUQ5 167 aa10.27□□□□□ -0.76
SDCBP-212ENST00000523483 KBTBD13C9JR72 458 aa10.27□□□□□ -0.76
SDCBP-212ENST00000523483 C22orf31O95567 290 aa10.27□□□□□ -0.76
SDCBP-212ENST00000523483 NR2F2P24468 414 aa10.27□□□□□ -0.76
SDCBP-212ENST00000523483 ERCC5P28715 1186 aaPredicted RBP10.27□□□□□ -0.76
SDCBP-212ENST00000523483 CAPSQ13938 189 aa10.27□□□□□ -0.76
SDCBP-212ENST00000523483 KNOP1Q1ED39 458 aaKnown RBP10.27□□□□□ -0.76
SDCBP-212ENST00000523483 MAP3K21Q5TCX8 1036 aa10.27□□□□□ -0.76
SDCBP-212ENST00000523483 DHTKD1Q96HY7 919 aaPredicted RBP10.27□□□□□ -0.76
SDCBP-212ENST00000523483 JPH2Q9BR39 696 aaPredicted RBP10.27□□□□□ -0.76
SDCBP-212ENST00000523483 SEL1LQ9UBV2 794 aa10.27□□□□□ -0.76
SDCBP-212ENST00000523483 RWDD2AQ9UIY3 292 aa10.27□□□□□ -0.76
SDCBP-212ENST00000523483 A0A087WZ62 844 aa10.27□□□□□ -0.77
SDCBP-212ENST00000523483 TFRCP02786 760 aaKnown RBP10.27□□□□□ -0.77
SDCBP-212ENST00000523483 FGFR4P22455 802 aa10.27□□□□□ -0.77
SDCBP-212ENST00000523483 ACLYP53396 1101 aa10.27□□□□□ -0.77
SDCBP-212ENST00000523483 PPP2R5AQ15172 486 aa10.27□□□□□ -0.77
SDCBP-212ENST00000523483 CCDC40Q4G0X9 1142 aa10.27□□□□□ -0.77
SDCBP-212ENST00000523483 TCERG1LQ5VWI1 586 aa10.27□□□□□ -0.77
SDCBP-212ENST00000523483 SPATA1Q5VX52 437 aa10.27□□□□□ -0.77
SDCBP-212ENST00000523483 TCP11Q8WWU5 503 aa10.27□□□□□ -0.77
SDCBP-212ENST00000523483 FDXACB1Q9BRP7 624 aaPredicted RBP10.27□□□□□ -0.77
SDCBP-212ENST00000523483 GBP3Q9H0R5 595 aa10.27□□□□□ -0.77
SDCBP-212ENST00000523483 STARD7Q9NQZ5 370 aa10.27□□□□□ -0.77
SDCBP-212ENST00000523483 Q9Y3F1 56 aa10.27□□□□□ -0.77
SDCBP-212ENST00000523483 PCDHA2Q9Y5H9 948 aa10.27□□□□□ -0.77
SDCBP-212ENST00000523483 NRCAMQ92823 1304 aa10.27□□□□□ -0.77
SDCBP-212ENST00000523483 GOLGA8IPA6NC78 632 aa10.27□□□□□ -0.77
SDCBP-212ENST00000523483 GOLGA8JA6NMD2 632 aa10.27□□□□□ -0.77
SDCBP-212ENST00000523483 MSCO60682 206 aa10.27□□□□□ -0.77
SDCBP-212ENST00000523483 DEKP35659 375 aaKnown RBP10.27□□□□□ -0.77
SDCBP-212ENST00000523483 MTIF2P46199 727 aaKnown RBP10.27□□□□□ -0.77
SDCBP-212ENST00000523483 ZNF131P52739 623 aa10.27□□□□□ -0.77
SDCBP-212ENST00000523483 EHHADHQ08426 723 aa10.27□□□□□ -0.77
SDCBP-212ENST00000523483 MKRN4PQ13434 485 aaPredicted RBP10.27□□□□□ -0.77
SDCBP-212ENST00000523483 ADAM9Q13443 819 aa10.27□□□□□ -0.77
SDCBP-212ENST00000523483 NCAPHQ15003 741 aa10.27□□□□□ -0.77
SDCBP-212ENST00000523483 IER5Q5VY09 327 aa10.27□□□□□ -0.77
SDCBP-212ENST00000523483 ZBTB8OSQ8IWT0 167 aa10.27□□□□□ -0.77
SDCBP-212ENST00000523483 ENOX1Q8TC92 643 aaKnown RBP10.27□□□□□ -0.77
SDCBP-212ENST00000523483 VPS16Q9H269 839 aa10.27□□□□□ -0.77
SDCBP-212ENST00000523483 IFNKQ9P0W0 207 aa10.27□□□□□ -0.77
SDCBP-212ENST00000523483 EVPLQ92817 2033 aa10.26□□□□□ -0.77
SDCBP-212ENST00000523483 MAGEB2O15479 319 aa10.26□□□□□ -0.77
SDCBP-212ENST00000523483 LIG4P49917 911 aa10.26□□□□□ -0.77
SDCBP-212ENST00000523483 ANKRD20A12PQ8NF67 263 aa10.26□□□□□ -0.77
SDCBP-212ENST00000523483 OSMRQ99650 979 aa10.26□□□□□ -0.77
SDCBP-212ENST00000523483 TAB2Q9NYJ8 693 aa10.26□□□□□ -0.77
SDCBP-212ENST00000523483 ADCY5O95622 1261 aa10.26□□□□□ -0.77
SDCBP-212ENST00000523483 IGHA2P01877 340 aa10.26□□□□□ -0.77
SDCBP-212ENST00000523483 HIC1Q14526 733 aa10.26□□□□□ -0.77
SDCBP-212ENST00000523483 RUFY4Q6ZNE9 571 aa10.26□□□□□ -0.77
SDCBP-212ENST00000523483 ZBTB33Q86T24 672 aa10.26□□□□□ -0.77
SDCBP-212ENST00000523483 ARRDC4Q8NCT1 418 aa10.26□□□□□ -0.77
SDCBP-212ENST00000523483 TMEM161BQ8NDZ6 487 aa10.26□□□□□ -0.77
SDCBP-212ENST00000523483 POMGNT1Q8WZA1 660 aa10.26□□□□□ -0.77
SDCBP-212ENST00000523483 TIPINQ9BVW5 301 aa10.26□□□□□ -0.77
SDCBP-212ENST00000523483 SENP6Q9GZR1 1112 aaPredicted RBP10.26□□□□□ -0.77
SDCBP-212ENST00000523483 TRMT13Q9NUP7 481 aaKnown RBP10.26□□□□□ -0.77
SDCBP-212ENST00000523483 RRN3P2A6NIE6 340 aa10.26□□□□□ -0.77
SDCBP-212ENST00000523483 EXOC3O60645 756 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms