RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 EVA1CP58658 441 aa8.06□□□□□ -1.12
CPNE3-206ENST00000523469 ERVK-21P61565 698 aa8.06□□□□□ -1.12
CPNE3-206ENST00000523469 IGBP1P78318 339 aa8.06□□□□□ -1.12
CPNE3-206ENST00000523469 KLHDC10Q6PID8 442 aa8.06□□□□□ -1.12
CPNE3-206ENST00000523469 WDR92Q96MX6 357 aa8.06□□□□□ -1.12
CPNE3-206ENST00000523469 TMPRSS11EQ9UL52 423 aa8.06□□□□□ -1.12
CPNE3-206ENST00000523469 SLC4A7Q9Y6M7 1214 aa8.06□□□□□ -1.12
CPNE3-206ENST00000523469 WASHC2AQ641Q2 1341 aa8.05□□□□□ -1.12
CPNE3-206ENST00000523469 H2AFYO75367 372 aaKnown RBP8.05□□□□□ -1.12
CPNE3-206ENST00000523469 CNR2P34972 360 aa8.05□□□□□ -1.12
CPNE3-206ENST00000523469 MRE11P49959 708 aa8.05□□□□□ -1.12
CPNE3-206ENST00000523469 FAM50AQ14320 339 aaKnown RBP8.05□□□□□ -1.12
CPNE3-206ENST00000523469 UGT8Q16880 541 aa8.05□□□□□ -1.12
CPNE3-206ENST00000523469 CCDC178Q5BJE1 867 aa8.05□□□□□ -1.12
CPNE3-206ENST00000523469 CT83Q5H943 113 aa8.05□□□□□ -1.12
CPNE3-206ENST00000523469 PITRM1Q5JRX3 1037 aa8.05□□□□□ -1.12
CPNE3-206ENST00000523469 ZFYVE27Q5T4F4 411 aa8.05□□□□□ -1.12
CPNE3-206ENST00000523469 AGBL4Q5VU57 503 aa8.05□□□□□ -1.12
CPNE3-206ENST00000523469 CMIPQ8IY22 773 aa8.05□□□□□ -1.12
CPNE3-206ENST00000523469 LPPQ93052 612 aa8.05□□□□□ -1.12
CPNE3-206ENST00000523469 NKD2Q969F2 451 aaPredicted RBP8.05□□□□□ -1.12
CPNE3-206ENST00000523469 GFM2Q969S9 779 aaKnown RBP8.05□□□□□ -1.12
CPNE3-206ENST00000523469 TEPSINQ96N21 525 aa8.05□□□□□ -1.12
CPNE3-206ENST00000523469 TRIM8Q9BZR9 551 aa8.05□□□□□ -1.12
CPNE3-206ENST00000523469 KIAA1683Q9H0B3 1180 aa8.05□□□□□ -1.12
CPNE3-206ENST00000523469 OR10A2Q9H208 303 aa8.05□□□□□ -1.12
CPNE3-206ENST00000523469 HOMER2Q9NSB8 354 aa8.05□□□□□ -1.12
CPNE3-206ENST00000523469 USP18Q9UMW8 372 aa8.05□□□□□ -1.12
CPNE3-206ENST00000523469 DUSP10Q9Y6W6 482 aa8.05□□□□□ -1.12
CPNE3-206ENST00000523469 URB2Q14146 1524 aaKnown RBP8.04□□□□□ -1.12
CPNE3-206ENST00000523469 PPP2CBP62714 309 aa8.04□□□□□ -1.12
CPNE3-206ENST00000523469 PPP2CAP67775 309 aa8.04□□□□□ -1.12
CPNE3-206ENST00000523469 MTMR1Q13613 665 aa8.04□□□□□ -1.12
CPNE3-206ENST00000523469 MAN2A1Q16706 1144 aa8.04□□□□□ -1.12
CPNE3-206ENST00000523469 LCE3BQ5TA77 95 aa8.04□□□□□ -1.12
CPNE3-206ENST00000523469 ARHGEF18Q6ZSZ5 1173 aa8.04□□□□□ -1.12
CPNE3-206ENST00000523469 RPUSD2Q8IZ73 545 aaKnown RBP8.04□□□□□ -1.12
CPNE3-206ENST00000523469 GAB3Q8WWW8 586 aa8.04□□□□□ -1.12
CPNE3-206ENST00000523469 RAX2Q96IS3 184 aa8.04□□□□□ -1.12
CPNE3-206ENST00000523469 ORAI2Q96SN7 254 aa8.04□□□□□ -1.12
CPNE3-206ENST00000523469 OSBPL6Q9BZF3 934 aa8.04□□□□□ -1.12
CPNE3-206ENST00000523469 RAPGEFL1Q9UHV5 662 aa8.04□□□□□ -1.12
CPNE3-206ENST00000523469 DNAI1Q9UI46 699 aa8.04□□□□□ -1.12
CPNE3-206ENST00000523469 FAM184BQ9ULE4 1060 aa8.04□□□□□ -1.12
CPNE3-206ENST00000523469 EIF4G3O43432 1585 aaKnown RBP8.04□□□□□ -1.12
CPNE3-206ENST00000523469 ZNF608Q9ULD9 1512 aaPredicted RBP8.03□□□□□ -1.12
CPNE3-206ENST00000523469 NRP2O60462 931 aa8.03□□□□□ -1.12
CPNE3-206ENST00000523469 KATNA1O75449 491 aa8.03□□□□□ -1.12
CPNE3-206ENST00000523469 HOXA5P20719 270 aa8.03□□□□□ -1.12
CPNE3-206ENST00000523469 KLF1Q13351 362 aaPredicted RBP8.03□□□□□ -1.12
CPNE3-206ENST00000523469 NFYCQ13952 458 aa8.03□□□□□ -1.12
CPNE3-206ENST00000523469 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.03□□□□□ -1.12
CPNE3-206ENST00000523469 FBLN7Q53RD9 439 aa8.03□□□□□ -1.12
CPNE3-206ENST00000523469 TTLL10Q6ZVT0 673 aa8.03□□□□□ -1.12
CPNE3-206ENST00000523469 USP30Q70CQ3 517 aa8.03□□□□□ -1.12
CPNE3-206ENST00000523469 LYSMD2Q8IV50 215 aa8.03□□□□□ -1.12
CPNE3-206ENST00000523469 OR14C36Q8NHC7 312 aa8.03□□□□□ -1.12
CPNE3-206ENST00000523469 EAF2Q96CJ1 260 aaPredicted RBP8.03□□□□□ -1.12
CPNE3-206ENST00000523469 ADAM7Q9H2U9 754 aa8.03□□□□□ -1.12
CPNE3-206ENST00000523469 KCTD10Q9H3F6 313 aa8.03□□□□□ -1.12
CPNE3-206ENST00000523469 PRSS50Q9UI38 385 aa8.03□□□□□ -1.12
CPNE3-206ENST00000523469 WASHC2CQ9Y4E1 1318 aa8.03□□□□□ -1.12
CPNE3-206ENST00000523469 A0A0A6YYK5 440 aaPredicted RBP8.02□□□□□ -1.13
CPNE3-206ENST00000523469 ARHGAP6O43182 974 aa8.02□□□□□ -1.13
CPNE3-206ENST00000523469 LPLP06858 475 aa8.02□□□□□ -1.13
CPNE3-206ENST00000523469 XPAP23025 273 aaPredicted RBP8.02□□□□□ -1.13
CPNE3-206ENST00000523469 EPHB4P54760 987 aa8.02□□□□□ -1.13
CPNE3-206ENST00000523469 PPARAQ07869 468 aa8.02□□□□□ -1.13
CPNE3-206ENST00000523469 ITKQ08881 620 aa8.02□□□□□ -1.13
CPNE3-206ENST00000523469 ADAM15Q13444 863 aa8.02□□□□□ -1.13
CPNE3-206ENST00000523469 TRIM25Q14258 630 aaKnown RBP8.02□□□□□ -1.13
CPNE3-206ENST00000523469 UBXN11Q5T124 520 aa8.02□□□□□ -1.13
CPNE3-206ENST00000523469 SYDE2Q5VT97 1194 aa8.02□□□□□ -1.13
CPNE3-206ENST00000523469 SLC41A1Q8IVJ1 513 aa8.02□□□□□ -1.13
CPNE3-206ENST00000523469 MTMR8Q96EF0 704 aa8.02□□□□□ -1.13
CPNE3-206ENST00000523469 SOX7Q9BT81 388 aa8.02□□□□□ -1.13
CPNE3-206ENST00000523469 RTEL1Q9NZ71 1219 aa8.02□□□□□ -1.13
CPNE3-206ENST00000523469 TRHDEQ9UKU6 1024 aa8.02□□□□□ -1.13
CPNE3-206ENST00000523469 NR2E1Q9Y466 385 aa8.02□□□□□ -1.13
CPNE3-206ENST00000523469 CTDP1Q9Y5B0 961 aaPredicted RBP8.02□□□□□ -1.13
CPNE3-206ENST00000523469 DAPK3O43293 454 aa8.01□□□□□ -1.13
CPNE3-206ENST00000523469 LAMTOR5O43504 91 aa8.01□□□□□ -1.13
CPNE3-206ENST00000523469 SEC24DO94855 1032 aaPredicted RBP8.01□□□□□ -1.13
CPNE3-206ENST00000523469 FSBPO95073 299 aa8.01□□□□□ -1.13
CPNE3-206ENST00000523469 CNOT4O95628 575 aaKnown RBP8.01□□□□□ -1.13
CPNE3-206ENST00000523469 CELA3BP08861 270 aa8.01□□□□□ -1.13
CPNE3-206ENST00000523469 GPR3P46089 330 aa8.01□□□□□ -1.13
CPNE3-206ENST00000523469 LGALS4P56470 323 aa8.01□□□□□ -1.13
CPNE3-206ENST00000523469 NRG3P56975 720 aa8.01□□□□□ -1.13
CPNE3-206ENST00000523469 MRPS9P82933 396 aaKnown RBP8.01□□□□□ -1.13
CPNE3-206ENST00000523469 SPIDRQ14159 915 aa8.01□□□□□ -1.13
CPNE3-206ENST00000523469 TBR1Q16650 682 aa8.01□□□□□ -1.13
CPNE3-206ENST00000523469 FERMT3Q86UX7 667 aa8.01□□□□□ -1.13
CPNE3-206ENST00000523469 PPP1R14CQ8TAE6 165 aa8.01□□□□□ -1.13
CPNE3-206ENST00000523469 TGFBRAP1Q8WUH2 860 aa8.01□□□□□ -1.13
CPNE3-206ENST00000523469 PRDM12Q9H4Q4 367 aa8.01□□□□□ -1.13
CPNE3-206ENST00000523469 SEC61A2Q9H9S3 476 aa8.01□□□□□ -1.13
CPNE3-206ENST00000523469 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.01□□□□□ -1.13
CPNE3-206ENST00000523469 CDY2AQ9Y6F7 541 aa8.01□□□□□ -1.13
CPNE3-206ENST00000523469 IFT140Q96RY7 1462 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms