RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.18□□□□□ -0.46
PVT1-216ENST00000523068 NEK9Q8TD19 979 aa12.18□□□□□ -0.46
PVT1-216ENST00000523068 POF1BQ8WVV4 589 aa12.18□□□□□ -0.46
PVT1-216ENST00000523068 TCP11Q8WWU5 503 aa12.18□□□□□ -0.46
PVT1-216ENST00000523068 PSPC1Q8WXF1 523 aaKnown RBP12.18□□□□□ -0.46
PVT1-216ENST00000523068 RSPH1Q8WYR4 309 aa12.18□□□□□ -0.46
PVT1-216ENST00000523068 DYDC2Q96IM9 177 aa12.18□□□□□ -0.46
PVT1-216ENST00000523068 C8orf76Q96K31 380 aa12.18□□□□□ -0.46
PVT1-216ENST00000523068 NLRP4Q96MN2 994 aa12.18□□□□□ -0.46
PVT1-216ENST00000523068 NECAB3Q96P71 396 aaPredicted RBP12.18□□□□□ -0.46
PVT1-216ENST00000523068 FDXACB1Q9BRP7 624 aaPredicted RBP12.18□□□□□ -0.46
PVT1-216ENST00000523068 DHX33Q9H6R0 707 aaKnown RBP12.18□□□□□ -0.46
PVT1-216ENST00000523068 TTC12Q9H892 705 aaPredicted RBP12.18□□□□□ -0.46
PVT1-216ENST00000523068 TYW1Q9NV66 732 aaKnown RBP12.18□□□□□ -0.46
PVT1-216ENST00000523068 COL4A3BPQ9Y5P4 624 aa12.18□□□□□ -0.46
PVT1-216ENST00000523068 FSD2A1L4K1 749 aa12.17□□□□□ -0.46
PVT1-216ENST00000523068 ASAP2O43150 1006 aa12.17□□□□□ -0.46
PVT1-216ENST00000523068 CSDE1O75534 798 aaKnown RBP12.17□□□□□ -0.46
PVT1-216ENST00000523068 FGFR4P22455 802 aa12.17□□□□□ -0.46
PVT1-216ENST00000523068 NPEPPSP55786 919 aa12.17□□□□□ -0.46
PVT1-216ENST00000523068 CYP4A11Q02928 519 aa12.17□□□□□ -0.46
PVT1-216ENST00000523068 ST3GAL1Q11201 340 aa12.17□□□□□ -0.46
PVT1-216ENST00000523068 XKR9Q5GH70 373 aa12.17□□□□□ -0.46
PVT1-216ENST00000523068 TWF2Q6IBS0 349 aaKnown RBP12.17□□□□□ -0.46
PVT1-216ENST00000523068 PTCRAQ6ISU1 281 aaPredicted RBP12.17□□□□□ -0.46
PVT1-216ENST00000523068 CATSPER4Q7RTX7 472 aa12.17□□□□□ -0.46
PVT1-216ENST00000523068 TPH2Q8IWU9 490 aa12.17□□□□□ -0.46
PVT1-216ENST00000523068 THNSL1Q8IYQ7 743 aa12.17□□□□□ -0.46
PVT1-216ENST00000523068 LRRC43Q8N309 656 aa12.17□□□□□ -0.46
PVT1-216ENST00000523068 COLGALT1Q8NBJ5 622 aa12.17□□□□□ -0.46
PVT1-216ENST00000523068 CASD1Q96PB1 797 aa12.17□□□□□ -0.46
PVT1-216ENST00000523068 EIF2AK1Q9BQI3 630 aaKnown RBP12.17□□□□□ -0.46
PVT1-216ENST00000523068 TRAIPQ9BWF2 469 aa12.17□□□□□ -0.46
PVT1-216ENST00000523068 RGL1Q9NZL6 768 aa12.17□□□□□ -0.46
PVT1-216ENST00000523068 WRAP73Q9P2S5 460 aaPredicted RBP12.17□□□□□ -0.46
PVT1-216ENST00000523068 CARNS1A5YM72 827 aa12.16□□□□□ -0.46
PVT1-216ENST00000523068 GRXCR2A6NFK2 248 aa12.16□□□□□ -0.46
PVT1-216ENST00000523068 H3BQ06 376 aaPredicted RBP12.16□□□□□ -0.46
PVT1-216ENST00000523068 FGF18O76093 207 aa12.16□□□□□ -0.46
PVT1-216ENST00000523068 SLITRK3O94933 977 aa12.16□□□□□ -0.46
PVT1-216ENST00000523068 CSPG5O95196 566 aa12.16□□□□□ -0.46
PVT1-216ENST00000523068 LYPLA2O95372 231 aa12.16□□□□□ -0.46
PVT1-216ENST00000523068 PPM1AP35813 382 aa12.16□□□□□ -0.46
PVT1-216ENST00000523068 TXKP42681 527 aa12.16□□□□□ -0.46
PVT1-216ENST00000523068 RAB27AP51159 221 aa12.16□□□□□ -0.46
PVT1-216ENST00000523068 HYAL1Q12794 435 aa12.16□□□□□ -0.46
PVT1-216ENST00000523068 ORC2Q13416 577 aaPredicted RBP12.16□□□□□ -0.46
PVT1-216ENST00000523068 GNL2Q13823 731 aaKnown RBP12.16□□□□□ -0.46
PVT1-216ENST00000523068 CAMK1Q14012 370 aa12.16□□□□□ -0.46
PVT1-216ENST00000523068 CTTNQ14247 550 aaKnown RBP12.16□□□□□ -0.46
PVT1-216ENST00000523068 EMC2Q15006 297 aa12.16□□□□□ -0.46
PVT1-216ENST00000523068 CTC1Q2NKJ3 1217 aa12.16□□□□□ -0.46
PVT1-216ENST00000523068 PDE12Q6L8Q7 609 aaKnown RBP12.16□□□□□ -0.46
PVT1-216ENST00000523068 SRGAP1Q7Z6B7 1085 aa12.16□□□□□ -0.46
PVT1-216ENST00000523068 KSR1Q8IVT5 923 aa12.16□□□□□ -0.46
PVT1-216ENST00000523068 FAM184AQ8NB25 1140 aa12.16□□□□□ -0.46
PVT1-216ENST00000523068 RNF169Q8NCN4 708 aa12.16□□□□□ -0.46
PVT1-216ENST00000523068 MICAL1Q8TDZ2 1067 aa12.16□□□□□ -0.46
PVT1-216ENST00000523068 PRPF31Q8WWY3 499 aaKnown RBP12.16□□□□□ -0.46
PVT1-216ENST00000523068 CCDC43Q96MW1 224 aaKnown RBP12.16□□□□□ -0.46
PVT1-216ENST00000523068 MTMR9Q96QG7 549 aa12.16□□□□□ -0.46
PVT1-216ENST00000523068 MTRQ99707 1265 aa12.16□□□□□ -0.46
PVT1-216ENST00000523068 MRPL9Q9BYD2 267 aaKnown RBP12.16□□□□□ -0.46
PVT1-216ENST00000523068 FOXP1Q9H334 677 aaPredicted RBP12.16□□□□□ -0.46
PVT1-216ENST00000523068 IGFLR1Q9H665 355 aa12.16□□□□□ -0.46
PVT1-216ENST00000523068 CWH43Q9H720 699 aa12.16□□□□□ -0.46
PVT1-216ENST00000523068 IFT122Q9HBG6 1241 aa12.16□□□□□ -0.46
PVT1-216ENST00000523068 TLR9Q9NR96 1032 aa12.16□□□□□ -0.46
PVT1-216ENST00000523068 ANKEF1Q9NU02 776 aa12.16□□□□□ -0.46
PVT1-216ENST00000523068 PIN4Q9Y237 131 aaKnown RBP12.16□□□□□ -0.46
PVT1-216ENST00000523068 LZTS1Q9Y250 596 aa12.16□□□□□ -0.46
PVT1-216ENST00000523068 TTC28Q96AY4 2481 aa12.16□□□□□ -0.46
PVT1-216ENST00000523068 MYO7AQ13402 2215 aa12.15□□□□□ -0.46
PVT1-216ENST00000523068 NCOR1O75376 2440 aa12.15□□□□□ -0.46
PVT1-216ENST00000523068 DGAT1O75907 488 aa12.15□□□□□ -0.46
PVT1-216ENST00000523068 DNAJB1P25685 340 aa12.15□□□□□ -0.46
PVT1-216ENST00000523068 MCM7P33993 719 aa12.15□□□□□ -0.46
PVT1-216ENST00000523068 PHKA2P46019 1235 aa12.15□□□□□ -0.46
PVT1-216ENST00000523068 RBM25P49756 843 aaKnown RBP12.15□□□□□ -0.46
PVT1-216ENST00000523068 PLCB3Q01970 1234 aa12.15□□□□□ -0.46
PVT1-216ENST00000523068 GUCY1B3Q02153 619 aa12.15□□□□□ -0.46
PVT1-216ENST00000523068 KRT17Q04695 432 aa12.15□□□□□ -0.46
PVT1-216ENST00000523068 LAMTOR4Q0VGL1 99 aa12.15□□□□□ -0.46
PVT1-216ENST00000523068 MXD4Q14582 209 aaPredicted RBP12.15□□□□□ -0.46
PVT1-216ENST00000523068 PCBP1Q15365 356 aaKnown RBP eCLIP12.15□□□□□ -0.46
PVT1-216ENST00000523068 ZNF598Q86UK7 904 aaKnown RBP12.15□□□□□ -0.46
PVT1-216ENST00000523068 FAM178BQ8IXR5 827 aa12.15□□□□□ -0.46
PVT1-216ENST00000523068 ZNF579Q8NAF0 562 aaKnown RBP12.15□□□□□ -0.46
PVT1-216ENST00000523068 FBXO18Q8NFZ0 1043 aa12.15□□□□□ -0.46
PVT1-216ENST00000523068 TMEM143Q96AN5 459 aa12.15□□□□□ -0.46
PVT1-216ENST00000523068 KIF2CQ99661 725 aa12.15□□□□□ -0.46
PVT1-216ENST00000523068 HSD17B14Q9BPX1 270 aa12.15□□□□□ -0.46
PVT1-216ENST00000523068 RNF19AQ9NV58 838 aa12.15□□□□□ -0.46
PVT1-216ENST00000523068 PUF60Q9UHX1 559 aaKnown RBP12.15□□□□□ -0.46
PVT1-216ENST00000523068 WNT7AO00755 349 aa12.14□□□□□ -0.47
PVT1-216ENST00000523068 ST18O60284 1047 aa12.14□□□□□ -0.47
PVT1-216ENST00000523068 SRGAP2CP0DJJ0 459 aa12.14□□□□□ -0.47
PVT1-216ENST00000523068 XRCC6P12956 609 aaKnown RBP eCLIP12.14□□□□□ -0.472e-7■■■■□ 23.7
PVT1-216ENST00000523068 IL9P15248 144 aa12.14□□□□□ -0.47
PVT1-216ENST00000523068 ATP2B1P20020 1258 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms