RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 A0A0U1RQF3 1178 aa20.89■□□□□ 0.93
SPIDR-220ENST00000522900 H3BQ06 376 aaPredicted RBP20.89■□□□□ 0.93
SPIDR-220ENST00000522900 RFC5P40937 340 aa20.89■□□□□ 0.93
SPIDR-220ENST00000522900 COL19A1Q14993 1142 aa20.89■□□□□ 0.93
SPIDR-220ENST00000522900 ZNF174Q15697 407 aa20.89■□□□□ 0.93
SPIDR-220ENST00000522900 LEXMQ3ZCV2 418 aa20.89■□□□□ 0.93
SPIDR-220ENST00000522900 EP400NLQ6ZTU2 488 aa20.89■□□□□ 0.93
SPIDR-220ENST00000522900 OTUD6AQ7L8S5 288 aa20.89■□□□□ 0.93
SPIDR-220ENST00000522900 ZNF598Q86UK7 904 aaKnown RBP20.89■□□□□ 0.93
SPIDR-220ENST00000522900 POF1BQ8WVV4 589 aa20.89■□□□□ 0.93
SPIDR-220ENST00000522900 TMEM117Q9H0C3 514 aa20.89■□□□□ 0.93
SPIDR-220ENST00000522900 IFT122Q9HBG6 1241 aa20.89■□□□□ 0.93
SPIDR-220ENST00000522900 PCDHGC5Q9Y5F6 944 aa20.89■□□□□ 0.93
SPIDR-220ENST00000522900 COL4A3BPQ9Y5P4 624 aa20.89■□□□□ 0.93
SPIDR-220ENST00000522900 TTC28Q96AY4 2481 aa20.88■□□□□ 0.93
SPIDR-220ENST00000522900 TCF20Q9UGU0 1960 aaKnown RBP20.88■□□□□ 0.93
SPIDR-220ENST00000522900 POTEMA6NI47 508 aa20.88■□□□□ 0.93
SPIDR-220ENST00000522900 SRGAP2CP0DJJ0 459 aa20.88■□□□□ 0.93
SPIDR-220ENST00000522900 ATF7P17544 494 aaPredicted RBP20.88■□□□□ 0.93
SPIDR-220ENST00000522900 HMGN5P82970 282 aaKnown RBP20.88■□□□□ 0.93
SPIDR-220ENST00000522900 CLLU1OSQ5K130 101 aa20.88■□□□□ 0.93
SPIDR-220ENST00000522900 COLGALT1Q8NBJ5 622 aa20.88■□□□□ 0.93
SPIDR-220ENST00000522900 NEK9Q8TD19 979 aa20.88■□□□□ 0.93
SPIDR-220ENST00000522900 PABPC5Q96DU9 382 aaKnown RBP20.88■□□□□ 0.93
SPIDR-220ENST00000522900 FOXP1Q9H334 677 aaPredicted RBP20.88■□□□□ 0.93
SPIDR-220ENST00000522900 IGFLR1Q9H665 355 aa20.88■□□□□ 0.93
SPIDR-220ENST00000522900 CHST12Q9NRB3 414 aa20.88■□□□□ 0.93
SPIDR-220ENST00000522900 PPME1Q9Y570 386 aa20.88■□□□□ 0.93
SPIDR-220ENST00000522900 LYPLA2O95372 231 aa20.87■□□□□ 0.93
SPIDR-220ENST00000522900 SFPQP23246 707 aaKnown RBP eCLIP20.87■□□□□ 0.93
SPIDR-220ENST00000522900 LTBRP36941 435 aa20.87■□□□□ 0.93
SPIDR-220ENST00000522900 LAMTOR4Q0VGL1 99 aa20.87■□□□□ 0.93
SPIDR-220ENST00000522900 EMC2Q15006 297 aa20.87■□□□□ 0.93
SPIDR-220ENST00000522900 LONRF3Q496Y0 759 aa20.87■□□□□ 0.93
SPIDR-220ENST00000522900 ADGRD2Q7Z7M1 963 aa20.87■□□□□ 0.93
SPIDR-220ENST00000522900 EXOC8Q8IYI6 725 aa20.87■□□□□ 0.93
SPIDR-220ENST00000522900 FAM184AQ8NB25 1140 aa20.87■□□□□ 0.93
SPIDR-220ENST00000522900 PSPC1Q8WXF1 523 aaKnown RBP20.87■□□□□ 0.93
SPIDR-220ENST00000522900 INO80BQ9C086 356 aaPredicted RBP20.87■□□□□ 0.93
SPIDR-220ENST00000522900 MINDY3Q9H8M7 445 aa20.87■□□□□ 0.93
SPIDR-220ENST00000522900 XPNPEP1Q9NQW7 623 aa20.87■□□□□ 0.93
SPIDR-220ENST00000522900 CLDND1Q9NY35 253 aa20.87■□□□□ 0.93
SPIDR-220ENST00000522900 PCDHB12Q9Y5F1 795 aa20.87■□□□□ 0.93
SPIDR-220ENST00000522900 LINC01565O15544 149 aa20.86■□□□□ 0.93
SPIDR-220ENST00000522900 DLX2Q07687 328 aaPredicted RBP20.86■□□□□ 0.93
SPIDR-220ENST00000522900 RABEP1Q15276 862 aa20.86■□□□□ 0.93
SPIDR-220ENST00000522900 CTC1Q2NKJ3 1217 aa20.86■□□□□ 0.93
SPIDR-220ENST00000522900 CATSPER4Q7RTX7 472 aa20.86■□□□□ 0.93
SPIDR-220ENST00000522900 HELQQ8TDG4 1101 aa20.86■□□□□ 0.93
SPIDR-220ENST00000522900 PIGOQ8TEQ8 1089 aa20.86■□□□□ 0.93
SPIDR-220ENST00000522900 AAASQ9NRG9 546 aa20.86■□□□□ 0.93
SPIDR-220ENST00000522900 ANKEF1Q9NU02 776 aa20.86■□□□□ 0.93
SPIDR-220ENST00000522900 DACT1Q9NYF0 836 aa20.86■□□□□ 0.93
SPIDR-220ENST00000522900 PIN4Q9Y237 131 aaKnown RBP20.86■□□□□ 0.93
SPIDR-220ENST00000522900 HOXA2O43364 376 aa20.85■□□□□ 0.93
SPIDR-220ENST00000522900 FGF18O76093 207 aa20.85■□□□□ 0.93
SPIDR-220ENST00000522900 CD2BP2O95400 341 aaKnown RBP20.85■□□□□ 0.93
SPIDR-220ENST00000522900 EOMESO95936 686 aa20.85■□□□□ 0.93
SPIDR-220ENST00000522900 SPATA31C1P0DKV0 1188 aa20.85■□□□□ 0.93
SPIDR-220ENST00000522900 IL9P15248 144 aa20.85■□□□□ 0.93
SPIDR-220ENST00000522900 PBX3P40426 434 aa20.85■□□□□ 0.93
SPIDR-220ENST00000522900 TECP42680 631 aa20.85■□□□□ 0.93
SPIDR-220ENST00000522900 PHKA2P46019 1235 aa20.85■□□□□ 0.93
SPIDR-220ENST00000522900 NBR1Q14596 966 aa20.85■□□□□ 0.93
SPIDR-220ENST00000522900 PTCRAQ6ISU1 281 aaPredicted RBP20.85■□□□□ 0.93
SPIDR-220ENST00000522900 FERMT3Q86UX7 667 aa20.85■□□□□ 0.93
SPIDR-220ENST00000522900 NOSTRINQ8IVI9 506 aa20.85■□□□□ 0.93
SPIDR-220ENST00000522900 ABI1Q8IZP0 508 aa20.85■□□□□ 0.93
SPIDR-220ENST00000522900 LPPQ93052 612 aa20.85■□□□□ 0.93
SPIDR-220ENST00000522900 MTRQ99707 1265 aa20.85■□□□□ 0.93
SPIDR-220ENST00000522900 FNDC1Q4ZHG4 1894 aaPredicted RBP20.85■□□□□ 0.93
SPIDR-220ENST00000522900 KIAA1671Q9BY89 1806 aa20.85■□□□□ 0.93
SPIDR-220ENST00000522900 MEIS3P2A8K0S8 358 aa20.84■□□□□ 0.93
SPIDR-220ENST00000522900 LAG3P18627 525 aa20.84■□□□□ 0.93
SPIDR-220ENST00000522900 ERVFC1P60507 584 aa20.84■□□□□ 0.93
SPIDR-220ENST00000522900 TWF2Q6IBS0 349 aaKnown RBP20.84■□□□□ 0.93
SPIDR-220ENST00000522900 THNSL1Q8IYQ7 743 aa20.84■□□□□ 0.93
SPIDR-220ENST00000522900 RNF149Q8NC42 400 aa20.84■□□□□ 0.93
SPIDR-220ENST00000522900 TCP11Q8WWU5 503 aa20.84■□□□□ 0.93
SPIDR-220ENST00000522900 TRAIPQ9BWF2 469 aa20.84■□□□□ 0.93
SPIDR-220ENST00000522900 CD320Q9NPF0 282 aa20.84■□□□□ 0.93
SPIDR-220ENST00000522900 GRXCR2A6NFK2 248 aa20.83■□□□□ 0.93
SPIDR-220ENST00000522900 GAS2O43903 313 aaKnown RBP20.83■□□□□ 0.93
SPIDR-220ENST00000522900 MED24O75448 989 aa20.83■□□□□ 0.93
SPIDR-220ENST00000522900 OR52Z1P0C646 297 aa20.83■□□□□ 0.93
SPIDR-220ENST00000522900 HOXA11P31270 313 aaPredicted RBP20.83■□□□□ 0.93
SPIDR-220ENST00000522900 RARRES1P49788 294 aa20.83■□□□□ 0.93
SPIDR-220ENST00000522900 ADAM15Q13444 863 aa20.83■□□□□ 0.93
SPIDR-220ENST00000522900 TTC38Q5R3I4 469 aa20.83■□□□□ 0.93
SPIDR-220ENST00000522900 KCNT2Q6UVM3 1135 aa20.83■□□□□ 0.93
SPIDR-220ENST00000522900 SRGAP1Q7Z6B7 1085 aa20.83■□□□□ 0.93
SPIDR-220ENST00000522900 RBM23Q86U06 439 aaKnown RBP20.83■□□□□ 0.93
SPIDR-220ENST00000522900 CATSPER3Q86XQ3 398 aa20.83■□□□□ 0.93
SPIDR-220ENST00000522900 C4orf32Q8N8J7 132 aa20.83■□□□□ 0.93
SPIDR-220ENST00000522900 ASAP3Q8TDY4 903 aa20.83■□□□□ 0.93
SPIDR-220ENST00000522900 MICAL1Q8TDZ2 1067 aa20.83■□□□□ 0.93
SPIDR-220ENST00000522900 AGPAT5Q9NUQ2 364 aa20.83■□□□□ 0.93
SPIDR-220ENST00000522900 MYO7AQ13402 2215 aa20.83■□□□□ 0.93
SPIDR-220ENST00000522900 ATG2AQ2TAZ0 1938 aa20.82■□□□□ 0.92
SPIDR-220ENST00000522900 ASAP2O43150 1006 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms