RNA–Protein interactions for RNA: ENST00000521977.1

SHPRH-209, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5

Gene SHPRH, Length 927 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-209ENST00000521977 C16orf70Q9BSU1 422 aa10.51□□□□□ -0.73
SHPRH-209ENST00000521977 TRIM5Q9C035 493 aa10.51□□□□□ -0.73
SHPRH-209ENST00000521977 GPRC5CQ9NQ84 441 aa10.51□□□□□ -0.73
SHPRH-209ENST00000521977 ERAP1Q9NZ08 941 aa10.51□□□□□ -0.73
SHPRH-209ENST00000521977 LIMA1Q9UHB6 759 aaKnown RBP10.51□□□□□ -0.73
SHPRH-209ENST00000521977 FAM184BQ9ULE4 1060 aa10.51□□□□□ -0.73
SHPRH-209ENST00000521977 ZMYM2Q9UBW7 1377 aa10.51□□□□□ -0.73
SHPRH-209ENST00000521977 PDXKO00764 312 aa10.5□□□□□ -0.73
SHPRH-209ENST00000521977 GAS2O43903 313 aaKnown RBP10.5□□□□□ -0.73
SHPRH-209ENST00000521977 MAFO75444 373 aaPredicted RBP10.5□□□□□ -0.73
SHPRH-209ENST00000521977 PRPF6O94906 941 aaKnown RBP10.5□□□□□ -0.73
SHPRH-209ENST00000521977 GCNT3O95395 438 aa10.5□□□□□ -0.73
SHPRH-209ENST00000521977 GNRH1P01148 92 aa10.5□□□□□ -0.73
SHPRH-209ENST00000521977 AKR1A1P14550 325 aa10.5□□□□□ -0.73
SHPRH-209ENST00000521977 NKX3-2P78367 333 aa10.5□□□□□ -0.73
SHPRH-209ENST00000521977 GTF2BQ00403 316 aa10.5□□□□□ -0.73
SHPRH-209ENST00000521977 SPAG1Q07617 926 aa10.5□□□□□ -0.73
SHPRH-209ENST00000521977 EMC2Q15006 297 aa10.5□□□□□ -0.73
SHPRH-209ENST00000521977 NFIL3Q16649 462 aa10.5□□□□□ -0.73
SHPRH-209ENST00000521977 DGKDQ16760 1214 aa10.5□□□□□ -0.73
SHPRH-209ENST00000521977 FAM102BQ5T8I3 360 aa10.5□□□□□ -0.73
SHPRH-209ENST00000521977 MFSD14CQ5VZR4 134 aa10.5□□□□□ -0.73
SHPRH-209ENST00000521977 LRRC55Q6ZSA7 311 aa10.5□□□□□ -0.73
SHPRH-209ENST00000521977 STXBP4Q6ZWJ1 553 aa10.5□□□□□ -0.73
SHPRH-209ENST00000521977 MAEAQ7L5Y9 396 aa10.5□□□□□ -0.73
SHPRH-209ENST00000521977 TRMT1LQ7Z2T5 733 aaKnown RBP10.5□□□□□ -0.73
SHPRH-209ENST00000521977 TLK2Q86UE8 772 aa10.5□□□□□ -0.73
SHPRH-209ENST00000521977 NELFCDQ8IXH7 590 aa10.5□□□□□ -0.73
SHPRH-209ENST00000521977 EXOC8Q8IYI6 725 aa10.5□□□□□ -0.73
SHPRH-209ENST00000521977 CSGALNACT2Q8N6G5 542 aa10.5□□□□□ -0.73
SHPRH-209ENST00000521977 SLC17A8Q8NDX2 589 aa10.5□□□□□ -0.73
SHPRH-209ENST00000521977 CD99L2Q8TCZ2 262 aa10.5□□□□□ -0.73
SHPRH-209ENST00000521977 KCNV2Q8TDN2 545 aa10.5□□□□□ -0.73
SHPRH-209ENST00000521977 TMEM174Q8WUU8 243 aa10.5□□□□□ -0.73
SHPRH-209ENST00000521977 TSG101Q99816 390 aa10.5□□□□□ -0.73
SHPRH-209ENST00000521977 ZBED2Q9BTP6 218 aa10.5□□□□□ -0.73
SHPRH-209ENST00000521977 SRRTQ9BXP5 876 aaKnown RBP10.5□□□□□ -0.73
SHPRH-209ENST00000521977 XPO4Q9C0E2 1151 aaKnown RBP10.5□□□□□ -0.73
SHPRH-209ENST00000521977 IFNKQ9P0W0 207 aa10.5□□□□□ -0.73
SHPRH-209ENST00000521977 SRRDQ9UH36 339 aa10.5□□□□□ -0.73
SHPRH-209ENST00000521977 A0A1B0GTH6 734 aa10.49□□□□□ -0.73
SHPRH-209ENST00000521977 BHMG1C9JSJ3 638 aaPredicted RBP10.49□□□□□ -0.73
SHPRH-209ENST00000521977 K7ENM7 598 aa10.49□□□□□ -0.73
SHPRH-209ENST00000521977 DYNC1LI2O43237 492 aaPredicted RBP10.49□□□□□ -0.73
SHPRH-209ENST00000521977 TGFB1I1O43294 461 aa10.49□□□□□ -0.73
SHPRH-209ENST00000521977 CBFA2T2O43439 604 aa10.49□□□□□ -0.73
SHPRH-209ENST00000521977 FGFR1OPO95684 399 aaKnown RBP10.49□□□□□ -0.73
SHPRH-209ENST00000521977 SERPINC1P01008 464 aa10.49□□□□□ -0.73
SHPRH-209ENST00000521977 EEF1GP26641 437 aaKnown RBP10.49□□□□□ -0.73
SHPRH-209ENST00000521977 MARK3P27448 753 aa10.49□□□□□ -0.73
SHPRH-209ENST00000521977 HOXD10P28358 340 aa10.49□□□□□ -0.73
SHPRH-209ENST00000521977 ARL2P36404 184 aa10.49□□□□□ -0.73
SHPRH-209ENST00000521977 NPTX2P47972 431 aa10.49□□□□□ -0.73
SHPRH-209ENST00000521977 POLGP54098 1239 aaPredicted RBP10.49□□□□□ -0.73
SHPRH-209ENST00000521977 PEX3P56589 373 aa10.49□□□□□ -0.73
SHPRH-209ENST00000521977 UBASH3AP57075 661 aa10.49□□□□□ -0.73
SHPRH-209ENST00000521977 FKBP3Q00688 224 aaKnown RBP10.49□□□□□ -0.73
SHPRH-209ENST00000521977 KCNA1Q09470 495 aa10.49□□□□□ -0.73
SHPRH-209ENST00000521977 ZC2HC1CQ53FD0 456 aaPredicted RBP10.49□□□□□ -0.73
SHPRH-209ENST00000521977 HSP90AA4PQ58FG1 418 aa10.49□□□□□ -0.73
SHPRH-209ENST00000521977 TCP11X2Q5H9J9 407 aa10.49□□□□□ -0.73
SHPRH-209ENST00000521977 ZNF484Q5JVG2 852 aa10.49□□□□□ -0.73
SHPRH-209ENST00000521977 FILIP1Q7Z7B0 1213 aa10.49□□□□□ -0.73
SHPRH-209ENST00000521977 TMEM161BQ8NDZ6 487 aa10.49□□□□□ -0.73
SHPRH-209ENST00000521977 SLC7A3Q8WY07 619 aa10.49□□□□□ -0.73
SHPRH-209ENST00000521977 BSNDQ8WZ55 320 aa10.49□□□□□ -0.73
SHPRH-209ENST00000521977 HVCN1Q96D96 273 aa10.49□□□□□ -0.73
SHPRH-209ENST00000521977 CEP63Q96MT8 703 aa10.49□□□□□ -0.73
SHPRH-209ENST00000521977 NAP1L5Q96NT1 182 aaPredicted RBP10.49□□□□□ -0.73
SHPRH-209ENST00000521977 CTAGE1Q96RT6 745 aa10.49□□□□□ -0.73
SHPRH-209ENST00000521977 ADAM33Q9BZ11 813 aa10.49□□□□□ -0.73
SHPRH-209ENST00000521977 RNPEPQ9H4A4 650 aa10.49□□□□□ -0.73
SHPRH-209ENST00000521977 TYW1Q9NV66 732 aaKnown RBP10.49□□□□□ -0.73
SHPRH-209ENST00000521977 INTS13Q9NVM9 706 aa10.49□□□□□ -0.73
SHPRH-209ENST00000521977 KCNG1Q9UIX4 513 aa10.49□□□□□ -0.73
SHPRH-209ENST00000521977 ARIH1Q9Y4X5 557 aaPredicted RBP10.49□□□□□ -0.73
SHPRH-209ENST00000521977 COL1A2P08123 1366 aa10.49□□□□□ -0.73
SHPRH-209ENST00000521977 KCNJ18B7U540 433 aa10.48□□□□□ -0.73
SHPRH-209ENST00000521977 H3BRB1 525 aa10.48□□□□□ -0.73
SHPRH-209ENST00000521977 CALUO43852 315 aaPredicted RBP10.48□□□□□ -0.73
SHPRH-209ENST00000521977 DUSP11O75319 330 aaKnown RBP10.48□□□□□ -0.73
SHPRH-209ENST00000521977 ZNF286BP0CG31 522 aa10.48□□□□□ -0.73
SHPRH-209ENST00000521977 CDK11BP21127 795 aaKnown RBP10.48□□□□□ -0.73
SHPRH-209ENST00000521977 SCP2P22307 547 aa10.48□□□□□ -0.73
SHPRH-209ENST00000521977 ABCD1P33897 745 aa10.48□□□□□ -0.73
SHPRH-209ENST00000521977 SMTNP53814 917 aa10.48□□□□□ -0.73
SHPRH-209ENST00000521977 MARSP56192 900 aaKnown RBP10.48□□□□□ -0.73
SHPRH-209ENST00000521977 SOX10P56693 466 aa10.48□□□□□ -0.73
SHPRH-209ENST00000521977 CACNB2Q08289 660 aaPredicted RBP10.48□□□□□ -0.73
SHPRH-209ENST00000521977 DMP1Q13316 513 aaPredicted RBP10.48□□□□□ -0.73
SHPRH-209ENST00000521977 KCNJ12Q14500 433 aa10.48□□□□□ -0.73
SHPRH-209ENST00000521977 NR1I3Q14994 352 aa10.48□□□□□ -0.73
SHPRH-209ENST00000521977 KRT31Q15323 416 aa10.48□□□□□ -0.73
SHPRH-209ENST00000521977 MAP3K21Q5TCX8 1036 aa10.48□□□□□ -0.73
SHPRH-209ENST00000521977 HAUS6Q7Z4H7 955 aa10.48□□□□□ -0.73
SHPRH-209ENST00000521977 FAM114A1Q8IWE2 563 aa10.48□□□□□ -0.73
SHPRH-209ENST00000521977 LINC01465Q8N7H1 131 aa10.48□□□□□ -0.73
SHPRH-209ENST00000521977 LENG1Q96BZ8 264 aaPredicted RBP10.48□□□□□ -0.73
SHPRH-209ENST00000521977 ERO1AQ96HE7 468 aa10.48□□□□□ -0.73
SHPRH-209ENST00000521977 JPH2Q9BR39 696 aaPredicted RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms