RNA–Protein interactions for RNA: ENST00000520850.5

TNPO1-212, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-212ENST00000520850 GBF1Q92538 1859 aa18.08■□□□□ 0.49
TNPO1-212ENST00000520850 DENND3A2RUS2 1198 aa18.08■□□□□ 0.48
TNPO1-212ENST00000520850 PP2D1A8MPX8 630 aa18.08■□□□□ 0.48
TNPO1-212ENST00000520850 PPP6R2O75170 966 aa18.08■□□□□ 0.48
TNPO1-212ENST00000520850 DGKIO75912 1065 aa18.08■□□□□ 0.48
TNPO1-212ENST00000520850 F13A1P00488 732 aa18.08■□□□□ 0.48
TNPO1-212ENST00000520850 CA3P07451 260 aa18.08■□□□□ 0.48
TNPO1-212ENST00000520850 MYOGP15173 224 aa18.08■□□□□ 0.48
TNPO1-212ENST00000520850 TAP1Q03518 808 aa18.08■□□□□ 0.48
TNPO1-212ENST00000520850 PPP2R2DQ66LE6 453 aa18.08■□□□□ 0.48
TNPO1-212ENST00000520850 KSR1Q8IVT5 923 aa18.08■□□□□ 0.48
TNPO1-212ENST00000520850 SYT2Q8N9I0 419 aaPredicted RBP18.08■□□□□ 0.48
TNPO1-212ENST00000520850 RNF149Q8NC42 400 aa18.08■□□□□ 0.48
TNPO1-212ENST00000520850 RC3H2Q9HBD1 1191 aaKnown RBP18.08■□□□□ 0.48
TNPO1-212ENST00000520850 FBXO2Q9UK22 296 aaPredicted RBP18.08■□□□□ 0.48
TNPO1-212ENST00000520850 A0A087WWV3 80 aa18.07■□□□□ 0.48
TNPO1-212ENST00000520850 A0A0U1RQF3 1178 aa18.07■□□□□ 0.48
TNPO1-212ENST00000520850 MGEA5O60502 916 aa18.07■□□□□ 0.48
TNPO1-212ENST00000520850 YEATS4O95619 227 aa18.07■□□□□ 0.48
TNPO1-212ENST00000520850 EOMESO95936 686 aa18.07■□□□□ 0.48
TNPO1-212ENST00000520850 SRGAP2CP0DJJ0 459 aa18.07■□□□□ 0.48
TNPO1-212ENST00000520850 SKIP12755 728 aa18.07■□□□□ 0.48
TNPO1-212ENST00000520850 GLRA2P23416 452 aa18.07■□□□□ 0.48
TNPO1-212ENST00000520850 AXLP30530 894 aa18.07■□□□□ 0.48
TNPO1-212ENST00000520850 PHKA2P46019 1235 aa18.07■□□□□ 0.48
TNPO1-212ENST00000520850 GRB10Q13322 594 aa18.07■□□□□ 0.48
TNPO1-212ENST00000520850 TMEM119Q4V9L6 283 aa18.07■□□□□ 0.48
TNPO1-212ENST00000520850 FAM173BQ6P4H8 233 aa18.07■□□□□ 0.48
TNPO1-212ENST00000520850 Q7L0L9 218 aa18.07■□□□□ 0.48
TNPO1-212ENST00000520850 CABP7Q86V35 215 aa18.07■□□□□ 0.48
TNPO1-212ENST00000520850 LINC00301Q8NCQ3 95 aa18.07■□□□□ 0.48
TNPO1-212ENST00000520850 KIFAP3Q92845 792 aa18.07■□□□□ 0.48
TNPO1-212ENST00000520850 CALML4Q96GE6 196 aa18.07■□□□□ 0.48
TNPO1-212ENST00000520850 NLRP4Q96MN2 994 aa18.07■□□□□ 0.48
TNPO1-212ENST00000520850 SAMD11Q96NU1 681 aa18.07■□□□□ 0.48
TNPO1-212ENST00000520850 PNMA5Q96PV4 448 aa18.07■□□□□ 0.48
TNPO1-212ENST00000520850 PPP1R16BQ96T49 567 aa18.07■□□□□ 0.48
TNPO1-212ENST00000520850 C17orf75Q9HAS0 396 aa18.07■□□□□ 0.48
TNPO1-212ENST00000520850 TMEM161AQ9NX61 479 aa18.07■□□□□ 0.48
TNPO1-212ENST00000520850 PCDHB7Q9Y5E2 793 aa18.07■□□□□ 0.48
TNPO1-212ENST00000520850 CHD9Q3L8U1 2897 aa18.07■□□□□ 0.48
TNPO1-212ENST00000520850 E9PMD0 336 aa18.06■□□□□ 0.48
TNPO1-212ENST00000520850 USO1O60763 962 aaKnown RBP18.06■□□□□ 0.48
TNPO1-212ENST00000520850 ZNF623O75123 536 aa18.06■□□□□ 0.48
TNPO1-212ENST00000520850 POU3F3P20264 500 aaPredicted RBP18.06■□□□□ 0.48
TNPO1-212ENST00000520850 GUCY2CP25092 1073 aa18.06■□□□□ 0.48
TNPO1-212ENST00000520850 ERVK-21P61565 698 aa18.06■□□□□ 0.48
TNPO1-212ENST00000520850 PPP2R5AQ15172 486 aa18.06■□□□□ 0.48
TNPO1-212ENST00000520850 C1orf186Q6ZWK4 172 aa18.06■□□□□ 0.48
TNPO1-212ENST00000520850 CDK5RAP3Q96JB5 506 aa18.06■□□□□ 0.48
TNPO1-212ENST00000520850 GUCD1Q96NT3 240 aa18.06■□□□□ 0.48
TNPO1-212ENST00000520850 YME1L1Q96TA2 773 aa18.06■□□□□ 0.48
TNPO1-212ENST00000520850 CFAP45Q9UL16 551 aa18.06■□□□□ 0.48
TNPO1-212ENST00000520850 STXBP5LQ9Y2K9 1186 aa18.06■□□□□ 0.48
TNPO1-212ENST00000520850 LINC01553A4QN01 128 aa18.05■□□□□ 0.48
TNPO1-212ENST00000520850 HOXA2O43364 376 aa18.05■□□□□ 0.48
TNPO1-212ENST00000520850 UPP2O95045 317 aa18.05■□□□□ 0.48
TNPO1-212ENST00000520850 BRD1O95696 1058 aa18.05■□□□□ 0.48
TNPO1-212ENST00000520850 NAMPTP43490 491 aa18.05■□□□□ 0.48
TNPO1-212ENST00000520850 NCBP1Q09161 790 aaKnown RBP18.05■□□□□ 0.48
TNPO1-212ENST00000520850 CAPSQ13938 189 aa18.05■□□□□ 0.48
TNPO1-212ENST00000520850 GRIN2CQ14957 1233 aa18.05■□□□□ 0.48
TNPO1-212ENST00000520850 FAM187BQ17R55 369 aa18.05■□□□□ 0.48
TNPO1-212ENST00000520850 CDCA2Q69YH5 1023 aaPredicted RBP18.05■□□□□ 0.48
TNPO1-212ENST00000520850 RINT1Q6NUQ1 792 aa18.05■□□□□ 0.48
TNPO1-212ENST00000520850 CATSPER4Q7RTX7 472 aa18.05■□□□□ 0.48
TNPO1-212ENST00000520850 TMCO2Q7Z6W1 182 aaPredicted RBP18.05■□□□□ 0.48
TNPO1-212ENST00000520850 KRI1Q8N9T8 703 aaKnown RBP18.05■□□□□ 0.48
TNPO1-212ENST00000520850 ASAP3Q8TDY4 903 aa18.05■□□□□ 0.48
TNPO1-212ENST00000520850 PRIMPOLQ96LW4 560 aa18.05■□□□□ 0.48
TNPO1-212ENST00000520850 TGS1Q96RS0 853 aaKnown RBP18.05■□□□□ 0.48
TNPO1-212ENST00000520850 CDX2Q99626 313 aaPredicted RBP18.05■□□□□ 0.48
TNPO1-212ENST00000520850 POLR3FQ9H1D9 316 aaPredicted RBP18.05■□□□□ 0.48
TNPO1-212ENST00000520850 C2orf40Q9H1Z8 148 aa18.05■□□□□ 0.48
TNPO1-212ENST00000520850 AGPAT5Q9NUQ2 364 aa18.05■□□□□ 0.48
TNPO1-212ENST00000520850 RWDD3Q9Y3V2 267 aa18.05■□□□□ 0.48
TNPO1-212ENST00000520850 LCHNA4D1U4 455 aa18.04■□□□□ 0.48
TNPO1-212ENST00000520850 MARCKSP29966 332 aaPredicted RBP18.04■□□□□ 0.48
TNPO1-212ENST00000520850 HOXA11P31270 313 aaPredicted RBP18.04■□□□□ 0.48
TNPO1-212ENST00000520850 DDIT3P35638 169 aa18.04■□□□□ 0.48
TNPO1-212ENST00000520850 RAB27AP51159 221 aa18.04■□□□□ 0.48
TNPO1-212ENST00000520850 SLC12A3P55017 1021 aa18.04■□□□□ 0.48
TNPO1-212ENST00000520850 GRIN1Q05586 938 aa18.04■□□□□ 0.48
TNPO1-212ENST00000520850 FAM102BQ5T8I3 360 aa18.04■□□□□ 0.48
TNPO1-212ENST00000520850 KCNK18Q7Z418 384 aa18.04■□□□□ 0.48
TNPO1-212ENST00000520850 CMTR2Q8IYT2 770 aaKnown RBP18.04■□□□□ 0.48
TNPO1-212ENST00000520850 KCNN1Q92952 543 aa18.04■□□□□ 0.48
TNPO1-212ENST00000520850 CLP1Q92989 425 aaKnown RBP18.04■□□□□ 0.48
TNPO1-212ENST00000520850 CCDC51Q96ER9 411 aa18.04■□□□□ 0.48
TNPO1-212ENST00000520850 ZNF668Q96K58 619 aaPredicted RBP18.04■□□□□ 0.48
TNPO1-212ENST00000520850 NTPCRQ9BSD7 190 aaKnown RBP18.04■□□□□ 0.48
TNPO1-212ENST00000520850 CSRNP2Q9H175 543 aa18.04■□□□□ 0.48
TNPO1-212ENST00000520850 MINDY3Q9H8M7 445 aa18.04■□□□□ 0.48
TNPO1-212ENST00000520850 BMP2KQ9NSY1 1161 aaPredicted RBP18.04■□□□□ 0.48
TNPO1-212ENST00000520850 LRFN2Q9ULH4 789 aa18.04■□□□□ 0.48
TNPO1-212ENST00000520850 CDH23Q9H251 3354 aa18.04■□□□□ 0.48
TNPO1-212ENST00000520850 PHLPP2Q6ZVD8 1323 aa18.03■□□□□ 0.48
TNPO1-212ENST00000520850 SPTLC2O15270 562 aa18.03■□□□□ 0.48
TNPO1-212ENST00000520850 CSDE1O75534 798 aaKnown RBP18.03■□□□□ 0.48
TNPO1-212ENST00000520850 EFNA5P52803 228 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms