RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 DAW1Q8N136 415 aa15.92■□□□□ 0.14
CLN8-204ENST00000519254 MYCT1Q8N699 235 aa15.92■□□□□ 0.14
CLN8-204ENST00000519254 CCDC51Q96ER9 411 aa15.92■□□□□ 0.14
CLN8-204ENST00000519254 FAM167AQ96KS9 214 aa15.92■□□□□ 0.14
CLN8-204ENST00000519254 ERGIC2Q96RQ1 377 aa15.92■□□□□ 0.14
CLN8-204ENST00000519254 PARVGQ9HBI0 331 aa15.92■□□□□ 0.14
CLN8-204ENST00000519254 ERAP1Q9NZ08 941 aa15.92■□□□□ 0.14
CLN8-204ENST00000519254 TRAF3IP3Q9Y228 551 aa15.92■□□□□ 0.14
CLN8-204ENST00000519254 R3HCC1Q9Y3T6 440 aaKnown RBP15.92■□□□□ 0.14
CLN8-204ENST00000519254 PTCH2Q9Y6C5 1203 aa15.92■□□□□ 0.14
CLN8-204ENST00000519254 SEPT4O43236 478 aa15.92■□□□□ 0.14
CLN8-204ENST00000519254 PPFIA4O75335 1185 aa15.92■□□□□ 0.14
CLN8-204ENST00000519254 FECHP22830 423 aa15.92■□□□□ 0.14
CLN8-204ENST00000519254 NMT1P30419 496 aaKnown RBP15.92■□□□□ 0.14
CLN8-204ENST00000519254 ATP8B4Q8TF62 1192 aa15.92■□□□□ 0.14
CLN8-204ENST00000519254 NDST4Q9H3R1 872 aa15.92■□□□□ 0.14
CLN8-204ENST00000519254 SEL1LQ9UBV2 794 aa15.92■□□□□ 0.14
CLN8-204ENST00000519254 ZNF215Q9UL58 517 aaPredicted RBP15.92■□□□□ 0.14
CLN8-204ENST00000519254 TTC26A0AVF1 554 aa15.91■□□□□ 0.14
CLN8-204ENST00000519254 A6NJR5 290 aa15.91■□□□□ 0.14
CLN8-204ENST00000519254 PDXKO00764 312 aa15.91■□□□□ 0.14
CLN8-204ENST00000519254 EIF3DO15371 548 aaKnown RBP eCLIP15.91■□□□□ 0.14
CLN8-204ENST00000519254 DUSP11O75319 330 aaKnown RBP15.91■□□□□ 0.14
CLN8-204ENST00000519254 GCNT3O95395 438 aa15.91■□□□□ 0.14
CLN8-204ENST00000519254 MYCNP04198 464 aaPredicted RBP15.91■□□□□ 0.14
CLN8-204ENST00000519254 TPM1P09493 284 aa15.91■□□□□ 0.14
CLN8-204ENST00000519254 C6orf222P0C671 652 aaPredicted RBP15.91■□□□□ 0.14
CLN8-204ENST00000519254 RARBP10826 455 aa15.91■□□□□ 0.14
CLN8-204ENST00000519254 KLK7P49862 253 aa15.91■□□□□ 0.14
CLN8-204ENST00000519254 CPT1AP50416 773 aa15.91■□□□□ 0.14
CLN8-204ENST00000519254 SLC26A2P50443 739 aa15.91■□□□□ 0.14
CLN8-204ENST00000519254 POLGP54098 1239 aaPredicted RBP15.91■□□□□ 0.14
CLN8-204ENST00000519254 SOX10P56693 466 aa15.91■□□□□ 0.14
CLN8-204ENST00000519254 KCNA1Q09470 495 aa15.91■□□□□ 0.14
CLN8-204ENST00000519254 ADAM9Q13443 819 aa15.91■□□□□ 0.14
CLN8-204ENST00000519254 SYCP1Q15431 976 aa15.91■□□□□ 0.14
CLN8-204ENST00000519254 FAM102BQ5T8I3 360 aa15.91■□□□□ 0.14
CLN8-204ENST00000519254 SLAIN1Q8ND83 568 aa15.91■□□□□ 0.14
CLN8-204ENST00000519254 PXYLP1Q8TE99 480 aa15.91■□□□□ 0.14
CLN8-204ENST00000519254 BBXQ8WY36 941 aaPredicted RBP15.91■□□□□ 0.14
CLN8-204ENST00000519254 PPP1R13BQ96KQ4 1090 aa15.91■□□□□ 0.14
CLN8-204ENST00000519254 C16orf70Q9BSU1 422 aa15.91■□□□□ 0.14
CLN8-204ENST00000519254 RNPEPQ9H4A4 650 aa15.91■□□□□ 0.14
CLN8-204ENST00000519254 GPRC5CQ9NQ84 441 aa15.91■□□□□ 0.14
CLN8-204ENST00000519254 PGK1P00558 417 aa15.9■□□□□ 0.14
CLN8-204ENST00000519254 INHAP05111 366 aa15.9■□□□□ 0.14
CLN8-204ENST00000519254 MYL3P08590 195 aa15.9■□□□□ 0.14
CLN8-204ENST00000519254 GRK4P32298 578 aa15.9■□□□□ 0.14
CLN8-204ENST00000519254 PRMT2P55345 433 aa15.9■□□□□ 0.14
CLN8-204ENST00000519254 MARSP56192 900 aaKnown RBP15.9■□□□□ 0.14
CLN8-204ENST00000519254 FSCN1Q16658 493 aaKnown RBP15.9■□□□□ 0.14
CLN8-204ENST00000519254 BRDTQ58F21 947 aaPredicted RBP15.9■□□□□ 0.14
CLN8-204ENST00000519254 ZNF720Q7Z2F6 126 aa15.9■□□□□ 0.14
CLN8-204ENST00000519254 TRAPPC12Q8WVT3 735 aa15.9■□□□□ 0.14
CLN8-204ENST00000519254 NAA15Q9BXJ9 866 aaKnown RBP15.9■□□□□ 0.14
CLN8-204ENST00000519254 NIFKQ9BYG3 293 aaKnown RBP15.9■□□□□ 0.14
CLN8-204ENST00000519254 TTYH3Q9C0H2 523 aa15.9■□□□□ 0.14
CLN8-204ENST00000519254 ATP6V0A4Q9HBG4 840 aa15.9■□□□□ 0.14
CLN8-204ENST00000519254 ABHD10Q9NUJ1 306 aa15.9■□□□□ 0.14
CLN8-204ENST00000519254 CAPN11Q9UMQ6 739 aa15.9■□□□□ 0.14
CLN8-204ENST00000519254 Q9Y3F1 56 aa15.9■□□□□ 0.14
CLN8-204ENST00000519254 ZMYM2Q9UBW7 1377 aa15.9■□□□□ 0.14
CLN8-204ENST00000519254 MYADML2A6NDP7 307 aa15.9■□□□□ 0.14
CLN8-204ENST00000519254 H3BRB1 525 aa15.9■□□□□ 0.14
CLN8-204ENST00000519254 DGAT1O75907 488 aa15.9■□□□□ 0.14
CLN8-204ENST00000519254 GNA14O95837 355 aa15.9■□□□□ 0.14
CLN8-204ENST00000519254 HOXD8P13378 290 aaPredicted RBP15.9■□□□□ 0.14
CLN8-204ENST00000519254 TNNT1P13805 278 aa15.9■□□□□ 0.14
CLN8-204ENST00000519254 KRT9P35527 623 aa15.9■□□□□ 0.14
CLN8-204ENST00000519254 IGBP1P78318 339 aa15.9■□□□□ 0.14
CLN8-204ENST00000519254 EMC2Q15006 297 aa15.9■□□□□ 0.14
CLN8-204ENST00000519254 ZC2HC1CQ53FD0 456 aaPredicted RBP15.9■□□□□ 0.14
CLN8-204ENST00000519254 ODR4Q5SWX8 454 aa15.9■□□□□ 0.14
CLN8-204ENST00000519254 FKBP15Q5T1M5 1219 aa15.9■□□□□ 0.14
CLN8-204ENST00000519254 TUT1Q9H6E5 874 aaKnown RBP15.9■□□□□ 0.14
CLN8-204ENST00000519254 TYW1Q9NV66 732 aaKnown RBP15.9■□□□□ 0.14
CLN8-204ENST00000519254 SIK3Q9Y2K2 1263 aa15.9■□□□□ 0.14
CLN8-204ENST00000519254 SOWAHDA6NJG2 315 aa15.89■□□□□ 0.13
CLN8-204ENST00000519254 TGFB1I1O43294 461 aa15.89■□□□□ 0.13
CLN8-204ENST00000519254 NR2F2P24468 414 aa15.89■□□□□ 0.13
CLN8-204ENST00000519254 MTF1Q14872 753 aa15.89■□□□□ 0.13
CLN8-204ENST00000519254 PTPN14Q15678 1187 aa15.89■□□□□ 0.13
CLN8-204ENST00000519254 CCDC40Q4G0X9 1142 aa15.89■□□□□ 0.13
CLN8-204ENST00000519254 MAP3K21Q5TCX8 1036 aa15.89■□□□□ 0.13
CLN8-204ENST00000519254 TOGARAM2Q6ZUX3 1019 aa15.89■□□□□ 0.13
CLN8-204ENST00000519254 TRIM59Q8IWR1 403 aa15.89■□□□□ 0.13
CLN8-204ENST00000519254 REXO1L1PQ8IX06 675 aa15.89■□□□□ 0.13
CLN8-204ENST00000519254 FAM178BQ8IXR5 827 aa15.89■□□□□ 0.13
CLN8-204ENST00000519254 SH3TC2Q8TF17 1288 aa15.89■□□□□ 0.13
CLN8-204ENST00000519254 PPP1R13LQ8WUF5 828 aa15.89■□□□□ 0.13
CLN8-204ENST00000519254 SLC7A3Q8WY07 619 aa15.89■□□□□ 0.13
CLN8-204ENST00000519254 DRC1Q96MC2 740 aa15.89■□□□□ 0.13
CLN8-204ENST00000519254 STRA6Q9BX79 667 aa15.89■□□□□ 0.13
CLN8-204ENST00000519254 SPC25Q9HBM1 224 aa15.89■□□□□ 0.13
CLN8-204ENST00000519254 XPNPEP3Q9NQH7 507 aa15.89■□□□□ 0.13
CLN8-204ENST00000519254 CETN3O15182 167 aa15.88■□□□□ 0.13
CLN8-204ENST00000519254 CALUO43852 315 aaPredicted RBP15.88■□□□□ 0.13
CLN8-204ENST00000519254 HBP1O60381 514 aa15.88■□□□□ 0.13
CLN8-204ENST00000519254 TARBP2Q15633 366 aaKnown RBP15.88■□□□□ 0.13
CLN8-204ENST00000519254 GNASQ5JWF2 1037 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms