RNA–Protein interactions for RNA: ENST00000518451.1

HOXA3-203, Transcript of homeobox A3, humanhuman

TSL 4

Gene HOXA3, Length 541 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-203ENST00000518451 PUS10Q3MIT2 529 aaKnown RBP20.71■□□□□ 0.91
HOXA3-203ENST00000518451 ZNF579Q8NAF0 562 aaKnown RBP20.71■□□□□ 0.91
HOXA3-203ENST00000518451 PRPF31Q8WWY3 499 aaKnown RBP20.71■□□□□ 0.91
HOXA3-203ENST00000518451 PABPC5Q96DU9 382 aaKnown RBP20.71■□□□□ 0.91
HOXA3-203ENST00000518451 CCDC43Q96MW1 224 aaKnown RBP20.71■□□□□ 0.91
HOXA3-203ENST00000518451 TRAIPQ9BWF2 469 aa20.71■□□□□ 0.91
HOXA3-203ENST00000518451 TYW1Q9NV66 732 aaKnown RBP20.71■□□□□ 0.91
HOXA3-203ENST00000518451 NOL7Q9UMY1 257 aaKnown RBP20.71■□□□□ 0.91
HOXA3-203ENST00000518451 COL4A4P53420 1690 aaPredicted RBP20.7■□□□□ 0.91
HOXA3-203ENST00000518451 CSDE1O75534 798 aaKnown RBP20.7■□□□□ 0.9
HOXA3-203ENST00000518451 FGFR1P11362 822 aa20.7■□□□□ 0.9
HOXA3-203ENST00000518451 LAG3P18627 525 aa20.7■□□□□ 0.9
HOXA3-203ENST00000518451 FGFR4P22455 802 aa20.7■□□□□ 0.9
HOXA3-203ENST00000518451 UBE3AQ05086 875 aa20.7■□□□□ 0.9
HOXA3-203ENST00000518451 MXD4Q14582 209 aaPredicted RBP20.7■□□□□ 0.9
HOXA3-203ENST00000518451 LEXMQ3ZCV2 418 aa20.7■□□□□ 0.9
HOXA3-203ENST00000518451 CATSPER4Q7RTX7 472 aa20.7■□□□□ 0.9
HOXA3-203ENST00000518451 SRGAP1Q7Z6B7 1085 aa20.7■□□□□ 0.9
HOXA3-203ENST00000518451 NOSTRINQ8IVI9 506 aa20.7■□□□□ 0.9
HOXA3-203ENST00000518451 SPPL3Q8TCT6 385 aa20.7■□□□□ 0.9
HOXA3-203ENST00000518451 TMEM143Q96AN5 459 aa20.7■□□□□ 0.9
HOXA3-203ENST00000518451 MTRQ99707 1265 aa20.7■□□□□ 0.9
HOXA3-203ENST00000518451 LOXHD1Q8IVV2 1947 aa20.69■□□□□ 0.9
HOXA3-203ENST00000518451 DGAT1O75907 488 aa20.69■□□□□ 0.9
HOXA3-203ENST00000518451 ITGB1P05556 798 aa20.69■□□□□ 0.9
HOXA3-203ENST00000518451 SRGAP2CP0DJJ0 459 aa20.69■□□□□ 0.9
HOXA3-203ENST00000518451 KCNA5P22460 613 aa20.69■□□□□ 0.9
HOXA3-203ENST00000518451 MCM2P49736 904 aa20.69■□□□□ 0.9
HOXA3-203ENST00000518451 LAMTOR4Q0VGL1 99 aa20.69■□□□□ 0.9
HOXA3-203ENST00000518451 EMC2Q15006 297 aa20.69■□□□□ 0.9
HOXA3-203ENST00000518451 TWF2Q6IBS0 349 aaKnown RBP20.69■□□□□ 0.9
HOXA3-203ENST00000518451 KSR1Q8IVT5 923 aa20.69■□□□□ 0.9
HOXA3-203ENST00000518451 RNF169Q8NCN4 708 aa20.69■□□□□ 0.9
HOXA3-203ENST00000518451 ERMNQ8TAM6 284 aa20.69■□□□□ 0.9
HOXA3-203ENST00000518451 RALGAPA2Q2PPJ7 1873 aa20.69■□□□□ 0.9
HOXA3-203ENST00000518451 ZBTB39O15060 712 aa20.68■□□□□ 0.9
HOXA3-203ENST00000518451 RAB27AP51159 221 aa20.68■□□□□ 0.9
HOXA3-203ENST00000518451 NCBP1Q09161 790 aaKnown RBP20.68■□□□□ 0.9
HOXA3-203ENST00000518451 TFDP1Q14186 410 aa20.68■□□□□ 0.9
HOXA3-203ENST00000518451 PCBP1Q15365 356 aaKnown RBP eCLIP20.68■□□□□ 0.9
HOXA3-203ENST00000518451 ZNF174Q15697 407 aa20.68■□□□□ 0.9
HOXA3-203ENST00000518451 EP400NLQ6ZTU2 488 aa20.68■□□□□ 0.9
HOXA3-203ENST00000518451 THNSL1Q8IYQ7 743 aa20.68■□□□□ 0.9
HOXA3-203ENST00000518451 LRRC43Q8N309 656 aa20.68■□□□□ 0.9
HOXA3-203ENST00000518451 POF1BQ8WVV4 589 aa20.68■□□□□ 0.9
HOXA3-203ENST00000518451 CASD1Q96PB1 797 aa20.68■□□□□ 0.9
HOXA3-203ENST00000518451 MRPL9Q9BYD2 267 aaKnown RBP20.68■□□□□ 0.9
HOXA3-203ENST00000518451 IFT122Q9HBG6 1241 aa20.68■□□□□ 0.9
HOXA3-203ENST00000518451 TUFT1Q9NNX1 390 aa20.68■□□□□ 0.9
HOXA3-203ENST00000518451 PUF60Q9UHX1 559 aaKnown RBP20.68■□□□□ 0.9
HOXA3-203ENST00000518451 PIN4Q9Y237 131 aaKnown RBP20.68■□□□□ 0.9
HOXA3-203ENST00000518451 FAM50BQ9Y247 325 aa20.68■□□□□ 0.9
HOXA3-203ENST00000518451 WDR81Q562E7 1941 aa20.68■□□□□ 0.9
HOXA3-203ENST00000518451 TTC28Q96AY4 2481 aa20.68■□□□□ 0.9
HOXA3-203ENST00000518451 CARNS1A5YM72 827 aa20.67■□□□□ 0.9
HOXA3-203ENST00000518451 WNT7AO00755 349 aa20.67■□□□□ 0.9
HOXA3-203ENST00000518451 OR52Z1P0C646 297 aa20.67■□□□□ 0.9
HOXA3-203ENST00000518451 U2AF2P26368 475 aaKnown RBP eCLIP20.67■□□□□ 0.9
HOXA3-203ENST00000518451 TECP42680 631 aa20.67■□□□□ 0.9
HOXA3-203ENST00000518451 PHKA2P46019 1235 aa20.67■□□□□ 0.9
HOXA3-203ENST00000518451 COL19A1Q14993 1142 aa20.67■□□□□ 0.9
HOXA3-203ENST00000518451 TTC38Q5R3I4 469 aa20.67■□□□□ 0.9
HOXA3-203ENST00000518451 PDE12Q6L8Q7 609 aaKnown RBP20.67■□□□□ 0.9
HOXA3-203ENST00000518451 ZNF598Q86UK7 904 aaKnown RBP20.67■□□□□ 0.9
HOXA3-203ENST00000518451 FERMT3Q86UX7 667 aa20.67■□□□□ 0.9
HOXA3-203ENST00000518451 COLGALT1Q8NBJ5 622 aa20.67■□□□□ 0.9
HOXA3-203ENST00000518451 MICAL1Q8TDZ2 1067 aa20.67■□□□□ 0.9
HOXA3-203ENST00000518451 PGBD4Q96DM1 585 aa20.67■□□□□ 0.9
HOXA3-203ENST00000518451 TMEM60Q9H2L4 133 aa20.67■□□□□ 0.9
HOXA3-203ENST00000518451 REV3LO60673 3130 aa20.66■□□□□ 0.9
HOXA3-203ENST00000518451 ZNF623O75123 536 aa20.66■□□□□ 0.9
HOXA3-203ENST00000518451 FGF18O76093 207 aa20.66■□□□□ 0.9
HOXA3-203ENST00000518451 PPM1AP35813 382 aa20.66■□□□□ 0.9
HOXA3-203ENST00000518451 KRT17Q04695 432 aa20.66■□□□□ 0.9
HOXA3-203ENST00000518451 POU5F1BQ06416 359 aa20.66■□□□□ 0.9
HOXA3-203ENST00000518451 RNF149Q8NC42 400 aa20.66■□□□□ 0.9
HOXA3-203ENST00000518451 NACC1Q96RE7 527 aa20.66■□□□□ 0.9
HOXA3-203ENST00000518451 POLR3CQ9BUI4 534 aaPredicted RBP20.66■□□□□ 0.9
HOXA3-203ENST00000518451 CWH43Q9H720 699 aa20.66■□□□□ 0.9
HOXA3-203ENST00000518451 CLDND1Q9NY35 253 aa20.66■□□□□ 0.9
HOXA3-203ENST00000518451 STK24Q9Y6E0 443 aa20.66■□□□□ 0.9
HOXA3-203ENST00000518451 VCANP13611 3396 aa20.65■□□□□ 0.9
HOXA3-203ENST00000518451 POTEMA6NI47 508 aa20.65■□□□□ 0.9
HOXA3-203ENST00000518451 PLCB3Q01970 1234 aa20.65■□□□□ 0.9
HOXA3-203ENST00000518451 CAMK1Q14012 370 aa20.65■□□□□ 0.9
HOXA3-203ENST00000518451 ZNF558Q96NG5 402 aa20.65■□□□□ 0.9
HOXA3-203ENST00000518451 BMP2KQ9NSY1 1161 aaPredicted RBP20.65■□□□□ 0.9
HOXA3-203ENST00000518451 AGPAT5Q9NUQ2 364 aa20.65■□□□□ 0.9
HOXA3-203ENST00000518451 FAM105AQ9NUU6 356 aa20.65■□□□□ 0.9
HOXA3-203ENST00000518451 LZTS1Q9Y250 596 aa20.65■□□□□ 0.9
HOXA3-203ENST00000518451 NLRC5Q86WI3 1866 aa20.64■□□□□ 0.9
HOXA3-203ENST00000518451 FSD2A1L4K1 749 aa20.64■□□□□ 0.89
HOXA3-203ENST00000518451 ERLIN2O94905 339 aa20.64■□□□□ 0.89
HOXA3-203ENST00000518451 MUTP22033 750 aa20.64■□□□□ 0.89
HOXA3-203ENST00000518451 DNAJB1P25685 340 aa20.64■□□□□ 0.89
HOXA3-203ENST00000518451 RPA1P27694 616 aa20.64■□□□□ 0.89
HOXA3-203ENST00000518451 AXLP30530 894 aa20.64■□□□□ 0.89
HOXA3-203ENST00000518451 ALDH7A1P49419 539 aaKnown RBP20.64■□□□□ 0.89
HOXA3-203ENST00000518451 RARRES1P49788 294 aa20.64■□□□□ 0.89
HOXA3-203ENST00000518451 HYAL1Q12794 435 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms